Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26055

Experiment: succinate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C); with MOPS
5,819,392	+		PFLU_RS26050	0.59	+0.4
5,819,392	+		PFLU_RS26050	0.59	+0.3
5,819,393	-		PFLU_RS26050	0.59	-0.3
5,819,402	+		PFLU_RS26050	0.59	+2.2
5,819,402	+		PFLU_RS26050	0.59	-0.4
5,819,428	+		PFLU_RS26050	0.61	+0.4
5,819,429	-		PFLU_RS26050	0.61	+1.0
5,819,429	-		PFLU_RS26050	0.61	+0.8
5,819,465	+		PFLU_RS26050	0.62	+0.8
5,819,465	+		PFLU_RS26050	0.62	+0.7
5,819,466	-		PFLU_RS26050	0.62	-0.4
5,819,466	-		PFLU_RS26050	0.62	-0.2
5,819,466	-		PFLU_RS26050	0.62	-0.2
5,819,466	-		PFLU_RS26050	0.62	-0.1
5,819,466	-		PFLU_RS26050	0.62	+1.0
5,819,466	-		PFLU_RS26050	0.62	-0.6
5,819,483	+		PFLU_RS26050	0.63	-1.6
5,819,510	+		PFLU_RS26050	0.64	-0.1
5,819,510	+		PFLU_RS26050	0.64	+0.3
5,819,510	+		PFLU_RS26050	0.64	-2.7
5,819,511	-		PFLU_RS26050	0.64	+0.2
5,819,511	-		PFLU_RS26050	0.64	-0.3
5,819,511	-		PFLU_RS26050	0.64	+0.1
5,819,511	-		PFLU_RS26050	0.64	-0.6
5,819,578	-		PFLU_RS26050	0.67	-1.1
5,819,578	-		PFLU_RS26050	0.67	-1.8
5,819,633	-		PFLU_RS26050	0.69	-1.6
5,819,649	+		PFLU_RS26050	0.70	+1.0
5,819,654	+		PFLU_RS26050	0.70	+0.7
5,819,655	-		PFLU_RS26050	0.70	+1.2
5,819,666	+		PFLU_RS26050	0.70	-2.0
5,819,666	+		PFLU_RS26050	0.70	-1.1
5,819,666	+		PFLU_RS26050	0.70	+0.5
5,819,666	+		PFLU_RS26050	0.70	-1.6
5,819,666	+		PFLU_RS26050	0.70	+1.0
5,819,666	+		PFLU_RS26050	0.70	+0.7
5,819,666	+		PFLU_RS26050	0.70	-1.7
5,819,666	+		PFLU_RS26050	0.70	-1.5
5,819,666	+		PFLU_RS26050	0.70	-0.1
5,819,666	+		PFLU_RS26050	0.70	+0.2
5,819,666	+		PFLU_RS26050	0.70	+0.2
5,819,666	+		PFLU_RS26050	0.70	-0.8
5,819,666	+		PFLU_RS26050	0.70	+0.2
5,819,666	+		PFLU_RS26050	0.70	-1.4
5,819,666	+		PFLU_RS26050	0.70	+0.3
5,819,667	-		PFLU_RS26050	0.70	-0.3
5,819,667	-		PFLU_RS26050	0.70	-0.5
5,819,667	-		PFLU_RS26050	0.70	-0.6
5,819,667	-		PFLU_RS26050	0.70	+0.1
5,819,667	-		PFLU_RS26050	0.70	-0.3
5,819,667	-		PFLU_RS26050	0.70	-0.5
5,819,667	-		PFLU_RS26050	0.70	+0.2
5,819,667	-		PFLU_RS26050	0.70	+1.0
5,819,667	-		PFLU_RS26050	0.70	-0.7
5,819,667	-		PFLU_RS26050	0.70	-0.6
5,819,667	-		PFLU_RS26050	0.70	+1.0
5,819,667	-		PFLU_RS26050	0.70	+0.5
5,819,676	+		PFLU_RS26050	0.71	+3.2
5,819,676	+		PFLU_RS26050	0.71	-0.5
5,819,676	+		PFLU_RS26050	0.71	+1.4
5,819,676	+		PFLU_RS26050	0.71	+0.9
5,819,677	-		PFLU_RS26050	0.71	+0.9
5,819,677	-		PFLU_RS26050	0.71	-0.3
5,819,677	-		PFLU_RS26050	0.71	-1.2
5,819,677	-		PFLU_RS26050	0.71	-1.6
5,819,707	+		PFLU_RS26050	0.72	+1.1
5,819,707	+		PFLU_RS26050	0.72	-2.3
5,819,707	+		PFLU_RS26050	0.72	-0.5
5,819,708	-		PFLU_RS26050	0.72	-1.5
5,819,708	-		PFLU_RS26050	0.72	+0.6
5,819,708	-		PFLU_RS26050	0.72	+0.8
5,819,708	-		PFLU_RS26050	0.72	+0.6
5,819,708	-		PFLU_RS26050	0.72	-0.5
5,819,708	-		PFLU_RS26050	0.72	+0.4
5,819,746	-		PFLU_RS26050	0.74	+1.3
5,819,760	+		PFLU_RS26050	0.74	+0.8
5,819,760	+		PFLU_RS26050	0.74	+0.2
5,819,760	+		PFLU_RS26050	0.74	-0.6
5,819,760	+		PFLU_RS26050	0.74	+0.8
5,819,760	+		PFLU_RS26050	0.74	+1.1
5,819,760	+		PFLU_RS26050	0.74	+0.3
5,819,760	+		PFLU_RS26050	0.74	+0.3
5,819,761	-		PFLU_RS26050	0.74	-1.0
5,819,761	-		PFLU_RS26050	0.74	+0.6
5,819,761	-		PFLU_RS26050	0.74	+1.7
5,819,761	-		PFLU_RS26050	0.74	+0.4
5,819,761	-		PFLU_RS26050	0.74	-0.3
5,819,761	-		PFLU_RS26050	0.74	+1.4
5,819,761	-		PFLU_RS26050	0.74	+0.1
5,819,761	-		PFLU_RS26050	0.74	-0.7
5,819,787	+		PFLU_RS26050	0.75	+0.5
5,819,788	-		PFLU_RS26050	0.75	+0.0
5,819,866	+		PFLU_RS26050	0.79	-0.4
5,819,890	+		PFLU_RS26050	0.80	+0.2
5,819,890	+		PFLU_RS26050	0.80	-0.3
5,819,890	+		PFLU_RS26050	0.80	+0.1
5,819,892	+		PFLU_RS26050	0.80	-0.0
5,819,892	+		PFLU_RS26050	0.80	-0.9
5,819,892	+		PFLU_RS26050	0.80	+0.7
5,819,892	+		PFLU_RS26050	0.80	-0.3
5,819,892	+		PFLU_RS26050	0.80	+1.0
5,819,892	+		PFLU_RS26050	0.80	+0.4
5,819,892	+		PFLU_RS26050	0.80	+0.4
5,819,892	+		PFLU_RS26050	0.80	-0.7
5,819,892	+		PFLU_RS26050	0.80	-0.1
5,819,892	+		PFLU_RS26050	0.80	+1.1
5,819,892	+		PFLU_RS26050	0.80	+0.4
5,819,892	+		PFLU_RS26050	0.80	+0.6
5,819,892	+		PFLU_RS26050	0.80	-0.0
5,819,892	+		PFLU_RS26050	0.80	-0.3
5,819,892	+		PFLU_RS26050	0.80	-0.3
5,819,892	+		PFLU_RS26050	0.80	+0.5
5,819,892	+		PFLU_RS26050	0.80	+0.0
5,819,892	+		PFLU_RS26050	0.80	+0.2
5,819,893	-		PFLU_RS26050	0.80	-0.3
5,819,893	-		PFLU_RS26050	0.80	+0.7
5,819,893	-		PFLU_RS26050	0.80	-3.0
5,819,893	-		PFLU_RS26050	0.80	+0.7
5,819,893	-		PFLU_RS26050	0.80	+0.4
5,819,893	-		PFLU_RS26050	0.80	+0.2
5,819,893	-		PFLU_RS26050	0.80	+0.8
5,819,893	-		PFLU_RS26050	0.80	+0.0
5,819,893	-		PFLU_RS26050	0.80	+0.1
5,819,893	-		PFLU_RS26050	0.80	-1.3
5,819,893	-		PFLU_RS26050	0.80	+0.2
5,819,893	-		PFLU_RS26050	0.80	-0.4
5,819,893	-		PFLU_RS26050	0.80	-0.9
5,819,893	-		PFLU_RS26050	0.80	-0.4
5,819,893	-		PFLU_RS26050	0.80	+0.4
5,819,893	-		PFLU_RS26050	0.80	+0.5
5,819,893	-		PFLU_RS26050	0.80	+0.9
5,819,893	-		PFLU_RS26050	0.80	+0.6
5,819,893	-		PFLU_RS26050	0.80	+0.9
5,819,958	-		PFLU_RS26050	0.82	-0.0
5,819,964	-		PFLU_RS26050	0.83	+0.2
5,819,964	-		PFLU_RS26050	0.83	-0.0
5,819,972	+		PFLU_RS26050	0.83	+1.8
5,819,972	+		PFLU_RS26050	0.83	+0.4
5,819,972	+		PFLU_RS26050	0.83	-1.2
5,819,972	+		PFLU_RS26050	0.83	+1.0
5,819,972	+		PFLU_RS26050	0.83	+0.0
5,819,972	+		PFLU_RS26050	0.83	+2.2
5,819,972	+		PFLU_RS26050	0.83	-0.0
5,819,972	+		PFLU_RS26050	0.83	-1.3
5,819,972	+		PFLU_RS26050	0.83	+1.2
5,819,972	+		PFLU_RS26050	0.83	+0.2
5,819,972	+		PFLU_RS26050	0.83	+0.5
5,819,972	+		PFLU_RS26050	0.83	+0.2
5,819,973	-		PFLU_RS26050	0.83	+0.4
5,819,973	-		PFLU_RS26050	0.83	-2.4
5,819,973	-		PFLU_RS26050	0.83	+1.0
5,819,973	-		PFLU_RS26050	0.83	+1.0
5,819,973	-		PFLU_RS26050	0.83	-0.2
5,819,973	-		PFLU_RS26050	0.83	+0.4
5,819,973	-		PFLU_RS26050	0.83	+0.6
5,819,974	+		PFLU_RS26050	0.83	-0.0
5,819,974	+		PFLU_RS26050	0.83	+0.4
5,819,974	+		PFLU_RS26050	0.83	+0.5
5,819,974	+		PFLU_RS26050	0.83	-1.0
5,819,974	+		PFLU_RS26050	0.83	+0.8
5,819,974	+		PFLU_RS26050	0.83	+0.7
5,819,974	+		PFLU_RS26050	0.83	+1.5
5,819,974	+		PFLU_RS26050	0.83	+0.1
5,819,974	+		PFLU_RS26050	0.83	-0.7
5,819,974	+		PFLU_RS26050	0.83	+0.8
5,819,974	+		PFLU_RS26050	0.83	-0.9
5,819,974	+		PFLU_RS26050	0.83	-0.0
5,819,974	+		PFLU_RS26050	0.83	-0.4
5,819,974	+		PFLU_RS26050	0.83	-0.3
5,819,974	+		PFLU_RS26050	0.83	+0.3
5,819,974	+		PFLU_RS26050	0.83	+0.2
5,819,974	+		PFLU_RS26050	0.83	+0.2
5,819,974	+		PFLU_RS26050	0.83	-0.6
5,819,974	+		PFLU_RS26050	0.83	+0.4
5,819,974	+		PFLU_RS26050	0.83	-0.3
5,819,974	+		PFLU_RS26050	0.83	+1.5
5,819,974	+		PFLU_RS26050	0.83	+0.9
5,819,974	+		PFLU_RS26050	0.83	-0.1
5,819,974	+		PFLU_RS26050	0.83	+0.2
5,819,974	+		PFLU_RS26050	0.83	+1.7
5,819,974	+		PFLU_RS26050	0.83	-1.1
5,819,974	+		PFLU_RS26050	0.83	-0.5
5,819,975	-		PFLU_RS26050	0.83	+0.5
5,819,975	-		PFLU_RS26050	0.83	-0.6
5,819,975	-		PFLU_RS26050	0.83	+0.9
5,819,975	-		PFLU_RS26050	0.83	+1.0
5,819,975	-		PFLU_RS26050	0.83	+1.5
5,819,975	-		PFLU_RS26050	0.83	-0.6
5,819,975	-		PFLU_RS26050	0.83	+0.0
5,819,975	-		PFLU_RS26050	0.83	+0.8
5,819,975	-		PFLU_RS26050	0.83	+0.4
5,819,975	-		PFLU_RS26050	0.83	-0.1
5,819,975	-		PFLU_RS26050	0.83	+1.1
5,819,975	-		PFLU_RS26050	0.83	+0.5
5,819,975	-		PFLU_RS26050	0.83	+0.4
5,819,975	-		PFLU_RS26050	0.83	-0.8
5,819,975	-		PFLU_RS26050	0.83	-0.6
5,819,975	-		PFLU_RS26050	0.83	-0.6
5,819,975	-		PFLU_RS26050	0.83	-0.4
5,819,975	-		PFLU_RS26050	0.83	-0.7
5,819,975	-		PFLU_RS26050	0.83	+0.7
5,819,975	-		PFLU_RS26050	0.83	-0.3
5,819,975	-		PFLU_RS26050	0.83	+1.2
5,819,975	-		PFLU_RS26050	0.83	+0.7
5,819,975	-		PFLU_RS26050	0.83	+1.3
5,819,975	-		PFLU_RS26050	0.83	+1.1
5,819,975	-		PFLU_RS26050	0.83	+0.9
5,819,975	-		PFLU_RS26050	0.83	-0.8
5,819,975	-		PFLU_RS26050	0.83	+0.6
5,819,975	-		PFLU_RS26050	0.83	-0.8
5,819,975	-		PFLU_RS26050	0.83	+1.0
5,819,975	-		PFLU_RS26050	0.83	-0.1
5,819,975	-		PFLU_RS26050	0.83	+0.6
5,819,999	+		PFLU_RS26050	0.84	-0.3
5,819,999	+		PFLU_RS26050	0.84	+0.2
5,820,031	-		PFLU_RS26050	0.85	-1.4
5,820,042	+		PFLU_RS26050	0.86	-1.6
5,820,042	+		PFLU_RS26050	0.86	+1.1
5,820,042	+		PFLU_RS26050	0.86	+0.4
5,820,042	+		PFLU_RS26050	0.86	+0.3
5,820,042	+		PFLU_RS26050	0.86	-0.4
5,820,042	+		PFLU_RS26050	0.86	-0.5
5,820,042	+		PFLU_RS26050	0.86	-0.3
5,820,042	+		PFLU_RS26050	0.86	-0.9
5,820,043	-		PFLU_RS26050	0.86	-0.1
5,820,043	-		PFLU_RS26050	0.86	-0.2
5,820,043	-		PFLU_RS26050	0.86	-0.6
5,820,043	-		PFLU_RS26050	0.86	+0.1
5,820,043	-		PFLU_RS26050	0.86	-1.2
5,820,109	+		PFLU_RS26050	0.89	-2.4
5,820,109	+		PFLU_RS26050	0.89	-1.4
5,820,109	+		PFLU_RS26050	0.89	+0.3
5,820,110	-		PFLU_RS26050	0.89	-1.1
5,820,110	-		PFLU_RS26050	0.89	+0.1
5,820,110	-		PFLU_RS26050	0.89	-0.5
5,820,110	-		PFLU_RS26050	0.89	-1.8
5,820,218	+				-0.6
5,820,237	+				-1.0
5,820,238	-				-0.6
5,820,265	+				+0.2
5,820,265	+				+0.9
5,820,265	+				-0.7
5,820,265	+				+1.2
5,820,265	+				-2.0
5,820,265	+				+0.7
5,820,265	+				+0.8
5,820,265	+				+0.1
5,820,265	+				-0.6
5,820,265	+				-0.1
5,820,265	+				+1.9
5,820,265	+				-2.0
5,820,265	+				-0.3
5,820,265	+				-0.8
5,820,265	+				-1.3
5,820,265	+				-0.9
5,820,265	+				+0.2
5,820,265	+				+0.4
5,820,266	-				-0.0
5,820,266	-				+0.9
5,820,266	-				+0.8
5,820,266	-				+0.3
5,820,266	-				-0.8
5,820,266	-				+0.2
5,820,266	-				+1.0
5,820,266	-				+0.9
5,820,266	-				+0.5
5,820,266	-				+0.1
5,820,266	-				+0.1
5,820,266	-				+0.4
5,820,266	-				-0.6
5,820,266	-				-0.1
5,820,266	-				+0.8
5,820,266	-				-0.6
5,820,266	-				+0.8
5,820,266	-				+0.6
5,820,266	-				-1.1
5,820,266	-				+0.3
5,820,266	-				+0.2
5,820,266	-				+0.1
5,820,266	-				+0.7
5,820,266	-				+0.4
5,820,266	-				+1.0
5,820,304	+				-0.1
5,820,304	+				-2.9
5,820,304	+				-0.3
5,820,304	+				-2.0
5,820,304	+				-1.9
5,820,304	+				+0.3
5,820,304	+				+0.7
5,820,305	-				+1.2
5,820,305	-				+0.0
5,820,305	-				+0.2
5,820,329	+				+0.1
5,820,393	+				+1.8
5,820,393	+				-1.4
5,820,393	+				+1.2
5,820,393	+				-1.2
5,820,394	-				-0.8
5,820,394	-				+1.1
5,820,394	-				+1.2
5,820,394	-				-1.7
5,820,394	-				+0.4
5,820,419	+				+0.3
5,820,517	+		PFLU_RS26055	0.16	+0.2
5,820,517	+		PFLU_RS26055	0.16	-0.2
5,820,517	+		PFLU_RS26055	0.16	+1.0
5,820,517	+		PFLU_RS26055	0.16	-0.6
5,820,517	+		PFLU_RS26055	0.16	+0.5
5,820,518	-		PFLU_RS26055	0.16	+1.0
5,820,518	-		PFLU_RS26055	0.16	-0.6
5,820,518	-		PFLU_RS26055	0.16	+2.0
5,820,518	-		PFLU_RS26055	0.16	+0.9
5,820,518	-		PFLU_RS26055	0.16	-0.1
5,820,518	-		PFLU_RS26055	0.16	+0.3
5,820,518	-		PFLU_RS26055	0.16	+1.1
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5,820,666	+		PFLU_RS26055	0.33	-1.0
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5,820,666	+		PFLU_RS26055	0.33	+0.6
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5,820,667	-		PFLU_RS26055	0.33	-2.5
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