Experiment: succinate (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS06860 and PFLU_RS06865 are separated by 112 nucleotides PFLU_RS06865 and PFLU_RS06870 overlap by 1 nucleotides PFLU_RS06870 and PFLU_RS06875 are separated by 186 nucleotides
PFLU_RS06860: PFLU_RS06860 - DUF479 domain-containing protein, at 1,536,480 to 1,537,064
_RS06860
PFLU_RS06865: PFLU_RS06865 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,537,177 to 1,537,968
_RS06865
PFLU_RS06870: PFLU_RS06870 - GNAT family N-acetyltransferase, at 1,537,968 to 1,538,723
_RS06870
PFLU_RS06875: PFLU_RS06875 - serine hydrolase, at 1,538,910 to 1,539,983
_RS06875
Position (kb) 1537
1538
1539 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1536.981 kb on + strand, within PFLU_RS06860 at 1536.981 kb on + strand, within PFLU_RS06860 at 1536.982 kb on - strand, within PFLU_RS06860 at 1537.014 kb on + strand at 1537.014 kb on + strand at 1537.014 kb on + strand at 1537.015 kb on - strand at 1537.062 kb on + strand at 1537.062 kb on + strand at 1537.107 kb on + strand at 1537.107 kb on + strand at 1537.107 kb on + strand at 1537.107 kb on + strand at 1537.107 kb on + strand at 1537.107 kb on + strand at 1537.107 kb on + strand at 1537.107 kb on + strand at 1537.107 kb on + strand at 1537.107 kb on + strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.108 kb on - strand at 1537.175 kb on - strand at 1537.204 kb on + strand at 1537.204 kb on + strand at 1537.204 kb on + strand at 1537.205 kb on - strand at 1537.205 kb on - strand at 1537.205 kb on - strand at 1537.405 kb on + strand, within PFLU_RS06865 at 1537.405 kb on + strand, within PFLU_RS06865 at 1537.405 kb on + strand, within PFLU_RS06865 at 1537.425 kb on - strand, within PFLU_RS06865 at 1537.494 kb on + strand, within PFLU_RS06865 at 1537.494 kb on + strand, within PFLU_RS06865 at 1537.495 kb on - strand, within PFLU_RS06865 at 1537.495 kb on - strand, within PFLU_RS06865 at 1537.623 kb on + strand, within PFLU_RS06865 at 1537.623 kb on + strand, within PFLU_RS06865 at 1537.662 kb on + strand, within PFLU_RS06865 at 1537.663 kb on - strand, within PFLU_RS06865 at 1537.663 kb on - strand, within PFLU_RS06865 at 1537.663 kb on - strand, within PFLU_RS06865 at 1537.810 kb on + strand, within PFLU_RS06865 at 1537.950 kb on - strand at 1538.101 kb on + strand, within PFLU_RS06870 at 1538.101 kb on + strand, within PFLU_RS06870 at 1538.101 kb on + strand, within PFLU_RS06870 at 1538.101 kb on + strand, within PFLU_RS06870 at 1538.101 kb on + strand, within PFLU_RS06870 at 1538.101 kb on + strand, within PFLU_RS06870 at 1538.101 kb on + strand, within PFLU_RS06870 at 1538.102 kb on - strand, within PFLU_RS06870 at 1538.102 kb on - strand, within PFLU_RS06870 at 1538.102 kb on - strand, within PFLU_RS06870 at 1538.102 kb on - strand, within PFLU_RS06870 at 1538.102 kb on - strand, within PFLU_RS06870 at 1538.102 kb on - strand, within PFLU_RS06870 at 1538.102 kb on - strand, within PFLU_RS06870 at 1538.203 kb on + strand, within PFLU_RS06870 at 1538.203 kb on + strand, within PFLU_RS06870 at 1538.203 kb on + strand, within PFLU_RS06870 at 1538.203 kb on + strand, within PFLU_RS06870 at 1538.204 kb on - strand, within PFLU_RS06870 at 1538.204 kb on - strand, within PFLU_RS06870 at 1538.284 kb on + strand, within PFLU_RS06870 at 1538.284 kb on + strand, within PFLU_RS06870 at 1538.284 kb on + strand, within PFLU_RS06870 at 1538.284 kb on + strand, within PFLU_RS06870 at 1538.284 kb on + strand, within PFLU_RS06870 at 1538.285 kb on - strand, within PFLU_RS06870 at 1538.285 kb on - strand, within PFLU_RS06870 at 1538.285 kb on - strand, within PFLU_RS06870 at 1538.376 kb on - strand, within PFLU_RS06870 at 1538.376 kb on - strand, within PFLU_RS06870 at 1538.443 kb on + strand, within PFLU_RS06870 at 1538.443 kb on + strand, within PFLU_RS06870 at 1538.443 kb on + strand, within PFLU_RS06870 at 1538.443 kb on + strand, within PFLU_RS06870 at 1538.443 kb on + strand, within PFLU_RS06870 at 1538.443 kb on + strand, within PFLU_RS06870 at 1538.444 kb on - strand, within PFLU_RS06870 at 1538.444 kb on - strand, within PFLU_RS06870 at 1538.444 kb on - strand, within PFLU_RS06870 at 1538.444 kb on - strand, within PFLU_RS06870 at 1538.444 kb on - strand, within PFLU_RS06870 at 1538.551 kb on + strand, within PFLU_RS06870 at 1538.551 kb on + strand, within PFLU_RS06870 at 1538.551 kb on + strand, within PFLU_RS06870 at 1538.551 kb on + strand, within PFLU_RS06870 at 1538.551 kb on + strand, within PFLU_RS06870 at 1538.551 kb on + strand, within PFLU_RS06870 at 1538.551 kb on + strand, within PFLU_RS06870 at 1538.551 kb on + strand, within PFLU_RS06870 at 1538.551 kb on + strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.552 kb on - strand, within PFLU_RS06870 at 1538.785 kb on + strand at 1538.785 kb on + strand at 1538.785 kb on + strand at 1538.785 kb on + strand at 1538.785 kb on + strand at 1538.785 kb on + strand at 1538.785 kb on + strand at 1538.786 kb on - strand at 1538.786 kb on - strand at 1538.786 kb on - strand at 1538.786 kb on - strand at 1538.786 kb on - strand at 1538.786 kb on - strand at 1538.786 kb on - strand at 1538.786 kb on - strand at 1538.786 kb on - strand at 1538.789 kb on + strand at 1538.789 kb on + strand at 1538.789 kb on + strand at 1538.789 kb on + strand at 1538.789 kb on + strand at 1538.789 kb on + strand at 1538.789 kb on + strand at 1538.790 kb on - strand at 1538.790 kb on - strand at 1538.790 kb on - strand at 1538.790 kb on - strand at 1538.790 kb on - strand at 1538.790 kb on - strand at 1538.815 kb on + strand at 1538.816 kb on - strand at 1538.816 kb on - strand at 1538.816 kb on - strand at 1538.816 kb on - strand at 1538.871 kb on + strand at 1539.040 kb on - strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.123 kb on + strand, within PFLU_RS06875 at 1539.124 kb on - strand, within PFLU_RS06875 at 1539.124 kb on - strand, within PFLU_RS06875 at 1539.124 kb on - strand, within PFLU_RS06875 at 1539.124 kb on - strand, within PFLU_RS06875 at 1539.124 kb on - strand, within PFLU_RS06875 at 1539.124 kb on - strand, within PFLU_RS06875 at 1539.124 kb on - strand, within PFLU_RS06875 at 1539.124 kb on - strand, within PFLU_RS06875 at 1539.124 kb on - strand, within PFLU_RS06875 at 1539.124 kb on - strand, within PFLU_RS06875 at 1539.132 kb on + strand, within PFLU_RS06875 at 1539.203 kb on - strand, within PFLU_RS06875 at 1539.342 kb on + strand, within PFLU_RS06875 at 1539.342 kb on + strand, within PFLU_RS06875 at 1539.342 kb on + strand, within PFLU_RS06875 at 1539.343 kb on - strand, within PFLU_RS06875 at 1539.343 kb on - strand, within PFLU_RS06875 at 1539.348 kb on + strand, within PFLU_RS06875 at 1539.384 kb on + strand, within PFLU_RS06875 at 1539.384 kb on + strand, within PFLU_RS06875 at 1539.384 kb on + strand, within PFLU_RS06875 at 1539.384 kb on + strand, within PFLU_RS06875 at 1539.385 kb on - strand, within PFLU_RS06875 at 1539.385 kb on - strand, within PFLU_RS06875 at 1539.482 kb on + strand, within PFLU_RS06875 at 1539.482 kb on + strand, within PFLU_RS06875 at 1539.482 kb on + strand, within PFLU_RS06875 at 1539.482 kb on + strand, within PFLU_RS06875 at 1539.482 kb on + strand, within PFLU_RS06875 at 1539.482 kb on + strand, within PFLU_RS06875 at 1539.483 kb on - strand, within PFLU_RS06875 at 1539.483 kb on - strand, within PFLU_RS06875 at 1539.525 kb on + strand, within PFLU_RS06875 at 1539.525 kb on + strand, within PFLU_RS06875 at 1539.525 kb on + strand, within PFLU_RS06875 at 1539.526 kb on - strand, within PFLU_RS06875 at 1539.526 kb on - strand, within PFLU_RS06875 at 1539.526 kb on - strand, within PFLU_RS06875 at 1539.526 kb on - strand, within PFLU_RS06875 at 1539.526 kb on - strand, within PFLU_RS06875 at 1539.534 kb on + strand, within PFLU_RS06875 at 1539.535 kb on - strand, within PFLU_RS06875 at 1539.621 kb on + strand, within PFLU_RS06875 at 1539.622 kb on - strand, within PFLU_RS06875 at 1539.622 kb on - strand, within PFLU_RS06875 at 1539.622 kb on - strand, within PFLU_RS06875 at 1539.622 kb on - strand, within PFLU_RS06875 at 1539.622 kb on - strand, within PFLU_RS06875 at 1539.622 kb on - strand, within PFLU_RS06875 at 1539.627 kb on + strand, within PFLU_RS06875 at 1539.628 kb on - strand, within PFLU_RS06875
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C); with MOPS remove 1,536,981 + PFLU_RS06860 0.86 -0.7 1,536,981 + PFLU_RS06860 0.86 +0.9 1,536,982 - PFLU_RS06860 0.86 -1.3 1,537,014 + -1.5 1,537,014 + +0.9 1,537,014 + +0.1 1,537,015 - +0.8 1,537,062 + -0.4 1,537,062 + +0.9 1,537,107 + -0.1 1,537,107 + -0.0 1,537,107 + -0.7 1,537,107 + +0.4 1,537,107 + +0.9 1,537,107 + +0.6 1,537,107 + +0.9 1,537,107 + +1.0 1,537,107 + -0.3 1,537,107 + -1.1 1,537,108 - +0.5 1,537,108 - +0.1 1,537,108 - -1.5 1,537,108 - -0.2 1,537,108 - -2.2 1,537,108 - -0.1 1,537,108 - -0.0 1,537,108 - -1.2 1,537,108 - +0.4 1,537,108 - -0.5 1,537,108 - +1.2 1,537,108 - +0.1 1,537,108 - +0.3 1,537,108 - +0.2 1,537,108 - +0.3 1,537,108 - -0.3 1,537,108 - +0.5 1,537,108 - -2.0 1,537,108 - +0.1 1,537,108 - -0.2 1,537,108 - +1.9 1,537,175 - +1.4 1,537,204 + +0.3 1,537,204 + +0.5 1,537,204 + -0.9 1,537,205 - +0.3 1,537,205 - +0.4 1,537,205 - +1.0 1,537,405 + PFLU_RS06865 0.29 -0.2 1,537,405 + PFLU_RS06865 0.29 -0.0 1,537,405 + PFLU_RS06865 0.29 +0.6 1,537,425 - PFLU_RS06865 0.31 +0.3 1,537,494 + PFLU_RS06865 0.40 -1.3 1,537,494 + PFLU_RS06865 0.40 -1.6 1,537,495 - PFLU_RS06865 0.40 -1.0 1,537,495 - PFLU_RS06865 0.40 -0.2 1,537,623 + PFLU_RS06865 0.56 -1.0 1,537,623 + PFLU_RS06865 0.56 -0.3 1,537,662 + PFLU_RS06865 0.61 +0.3 1,537,663 - PFLU_RS06865 0.61 -0.7 1,537,663 - PFLU_RS06865 0.61 -0.3 1,537,663 - PFLU_RS06865 0.61 -0.4 1,537,810 + PFLU_RS06865 0.80 -0.7 1,537,950 - +0.3 1,538,101 + PFLU_RS06870 0.18 +0.5 1,538,101 + PFLU_RS06870 0.18 -0.1 1,538,101 + PFLU_RS06870 0.18 +1.0 1,538,101 + PFLU_RS06870 0.18 -2.0 1,538,101 + PFLU_RS06870 0.18 +0.1 1,538,101 + PFLU_RS06870 0.18 -0.4 1,538,101 + PFLU_RS06870 0.18 -0.2 1,538,102 - PFLU_RS06870 0.18 +0.2 1,538,102 - PFLU_RS06870 0.18 -1.0 1,538,102 - PFLU_RS06870 0.18 +0.1 1,538,102 - PFLU_RS06870 0.18 -1.4 1,538,102 - PFLU_RS06870 0.18 +1.1 1,538,102 - PFLU_RS06870 0.18 -1.3 1,538,102 - PFLU_RS06870 0.18 -1.0 1,538,203 + PFLU_RS06870 0.31 -1.2 1,538,203 + PFLU_RS06870 0.31 +0.0 1,538,203 + PFLU_RS06870 0.31 -0.2 1,538,203 + PFLU_RS06870 0.31 -0.2 1,538,204 - PFLU_RS06870 0.31 -0.7 1,538,204 - PFLU_RS06870 0.31 +0.5 1,538,284 + PFLU_RS06870 0.42 +0.3 1,538,284 + PFLU_RS06870 0.42 -3.1 1,538,284 + PFLU_RS06870 0.42 -1.7 1,538,284 + PFLU_RS06870 0.42 +0.0 1,538,284 + PFLU_RS06870 0.42 -0.6 1,538,285 - PFLU_RS06870 0.42 -1.5 1,538,285 - PFLU_RS06870 0.42 -0.9 1,538,285 - PFLU_RS06870 0.42 +0.3 1,538,376 - PFLU_RS06870 0.54 -0.5 1,538,376 - PFLU_RS06870 0.54 -0.0 1,538,443 + PFLU_RS06870 0.63 +0.6 1,538,443 + PFLU_RS06870 0.63 +0.4 1,538,443 + PFLU_RS06870 0.63 +0.7 1,538,443 + PFLU_RS06870 0.63 -0.9 1,538,443 + PFLU_RS06870 0.63 -1.0 1,538,443 + PFLU_RS06870 0.63 -0.1 1,538,444 - PFLU_RS06870 0.63 -0.7 1,538,444 - PFLU_RS06870 0.63 -0.1 1,538,444 - PFLU_RS06870 0.63 +0.2 1,538,444 - PFLU_RS06870 0.63 -0.4 1,538,444 - PFLU_RS06870 0.63 +0.1 1,538,551 + PFLU_RS06870 0.77 -1.0 1,538,551 + PFLU_RS06870 0.77 -0.7 1,538,551 + PFLU_RS06870 0.77 -0.9 1,538,551 + PFLU_RS06870 0.77 -1.5 1,538,551 + PFLU_RS06870 0.77 +0.7 1,538,551 + PFLU_RS06870 0.77 +1.8 1,538,551 + PFLU_RS06870 0.77 +0.3 1,538,551 + PFLU_RS06870 0.77 -0.8 1,538,551 + PFLU_RS06870 0.77 +0.8 1,538,552 - PFLU_RS06870 0.77 +0.7 1,538,552 - PFLU_RS06870 0.77 -0.4 1,538,552 - PFLU_RS06870 0.77 -0.9 1,538,552 - PFLU_RS06870 0.77 +0.4 1,538,552 - PFLU_RS06870 0.77 +0.3 1,538,552 - PFLU_RS06870 0.77 +0.1 1,538,552 - PFLU_RS06870 0.77 -2.3 1,538,552 - PFLU_RS06870 0.77 +0.8 1,538,552 - PFLU_RS06870 0.77 -1.7 1,538,552 - PFLU_RS06870 0.77 -0.5 1,538,552 - PFLU_RS06870 0.77 -1.4 1,538,785 + +1.8 1,538,785 + -0.9 1,538,785 + -0.3 1,538,785 + -1.2 1,538,785 + -0.7 1,538,785 + -0.1 1,538,785 + -1.0 1,538,786 - +0.5 1,538,786 - -0.1 1,538,786 - +0.8 1,538,786 - -0.4 1,538,786 - -0.6 1,538,786 - +0.5 1,538,786 - -0.3 1,538,786 - +1.4 1,538,786 - +0.3 1,538,789 + -0.6 1,538,789 + +1.3 1,538,789 + +0.8 1,538,789 + -1.6 1,538,789 + +0.6 1,538,789 + -1.2 1,538,789 + -0.2 1,538,790 - -0.3 1,538,790 - +0.8 1,538,790 - -1.4 1,538,790 - +0.5 1,538,790 - -0.2 1,538,790 - -0.6 1,538,815 + +0.5 1,538,816 - -1.7 1,538,816 - -2.0 1,538,816 - -1.6 1,538,816 - +0.3 1,538,871 + -0.6 1,539,040 - PFLU_RS06875 0.12 -0.2 1,539,123 + PFLU_RS06875 0.20 +0.1 1,539,123 + PFLU_RS06875 0.20 -3.1 1,539,123 + PFLU_RS06875 0.20 +0.1 1,539,123 + PFLU_RS06875 0.20 +1.0 1,539,123 + PFLU_RS06875 0.20 -0.4 1,539,123 + PFLU_RS06875 0.20 +0.5 1,539,123 + PFLU_RS06875 0.20 +1.3 1,539,123 + PFLU_RS06875 0.20 +0.3 1,539,123 + PFLU_RS06875 0.20 -0.1 1,539,123 + PFLU_RS06875 0.20 -3.2 1,539,123 + PFLU_RS06875 0.20 -1.0 1,539,123 + PFLU_RS06875 0.20 -0.4 1,539,123 + PFLU_RS06875 0.20 -0.3 1,539,123 + PFLU_RS06875 0.20 -0.7 1,539,123 + PFLU_RS06875 0.20 +0.5 1,539,123 + PFLU_RS06875 0.20 -2.2 1,539,123 + PFLU_RS06875 0.20 -0.1 1,539,123 + PFLU_RS06875 0.20 -1.3 1,539,124 - PFLU_RS06875 0.20 -2.0 1,539,124 - PFLU_RS06875 0.20 +0.4 1,539,124 - PFLU_RS06875 0.20 +0.0 1,539,124 - PFLU_RS06875 0.20 -0.5 1,539,124 - PFLU_RS06875 0.20 -0.4 1,539,124 - PFLU_RS06875 0.20 -0.6 1,539,124 - PFLU_RS06875 0.20 +0.0 1,539,124 - PFLU_RS06875 0.20 +0.1 1,539,124 - PFLU_RS06875 0.20 -2.5 1,539,124 - PFLU_RS06875 0.20 +0.8 1,539,132 + PFLU_RS06875 0.21 +0.4 1,539,203 - PFLU_RS06875 0.27 -0.2 1,539,342 + PFLU_RS06875 0.40 -0.2 1,539,342 + PFLU_RS06875 0.40 +0.2 1,539,342 + PFLU_RS06875 0.40 -0.1 1,539,343 - PFLU_RS06875 0.40 -0.3 1,539,343 - PFLU_RS06875 0.40 +0.6 1,539,348 + PFLU_RS06875 0.41 -0.0 1,539,384 + PFLU_RS06875 0.44 +0.6 1,539,384 + PFLU_RS06875 0.44 -1.6 1,539,384 + PFLU_RS06875 0.44 -0.7 1,539,384 + PFLU_RS06875 0.44 +1.0 1,539,385 - PFLU_RS06875 0.44 -0.2 1,539,385 - PFLU_RS06875 0.44 -0.3 1,539,482 + PFLU_RS06875 0.53 +1.0 1,539,482 + PFLU_RS06875 0.53 -0.7 1,539,482 + PFLU_RS06875 0.53 -1.4 1,539,482 + PFLU_RS06875 0.53 -0.4 1,539,482 + PFLU_RS06875 0.53 -1.6 1,539,482 + PFLU_RS06875 0.53 +0.2 1,539,483 - PFLU_RS06875 0.53 +0.1 1,539,483 - PFLU_RS06875 0.53 -0.2 1,539,525 + PFLU_RS06875 0.57 +0.1 1,539,525 + PFLU_RS06875 0.57 +0.1 1,539,525 + PFLU_RS06875 0.57 -0.0 1,539,526 - PFLU_RS06875 0.57 +0.5 1,539,526 - PFLU_RS06875 0.57 -0.6 1,539,526 - PFLU_RS06875 0.57 +0.3 1,539,526 - PFLU_RS06875 0.57 +1.0 1,539,526 - PFLU_RS06875 0.57 +1.3 1,539,534 + PFLU_RS06875 0.58 +0.0 1,539,535 - PFLU_RS06875 0.58 +0.6 1,539,621 + PFLU_RS06875 0.66 +0.3 1,539,622 - PFLU_RS06875 0.66 -1.2 1,539,622 - PFLU_RS06875 0.66 -0.0 1,539,622 - PFLU_RS06875 0.66 +1.2 1,539,622 - PFLU_RS06875 0.66 -0.3 1,539,622 - PFLU_RS06875 0.66 -1.0 1,539,622 - PFLU_RS06875 0.66 +0.6 1,539,627 + PFLU_RS06875 0.67 -0.2 1,539,628 - PFLU_RS06875 0.67 +0.3
Or see this region's nucleotide sequence