Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS06575

Experiment: succinate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C); with MOPS
1,468,682	+				+0.3
1,468,682	+				-1.1
1,468,682	+				+0.2
1,468,682	+				+0.7
1,468,682	+				+1.1
1,468,682	+				-0.2
1,468,683	-				-0.1
1,468,683	-				-0.7
1,468,683	-				-2.3
1,468,683	-				+0.8
1,468,685	+				-1.1
1,468,685	+				-0.5
1,468,685	+				+0.8
1,468,685	+				-0.4
1,468,686	-				-0.7
1,468,686	-				-1.4
1,468,686	-				+1.0
1,468,686	-				+1.5
1,468,686	-				+0.1
1,468,686	-				-0.1
1,468,686	-				+1.2
1,468,686	-				+0.8
1,468,686	-				+1.5
1,468,686	-				+0.6
1,468,777	+				-0.3
1,468,777	+				-0.7
1,468,777	+				-0.8
1,468,777	+				+0.1
1,468,777	+				-0.4
1,468,777	+				+0.1
1,468,777	+				+0.0
1,468,778	-				-0.6
1,468,778	-				-0.5
1,468,778	-				-3.1
1,468,778	-				-0.1
1,468,778	-				-0.1
1,468,778	-				-0.7
1,468,778	-				-0.5
1,468,783	+				-0.3
1,468,783	+				-0.2
1,468,783	+				-0.8
1,468,783	+				+0.6
1,468,783	+				-2.0
1,468,783	+				-1.8
1,468,783	+				-0.4
1,468,783	+				+1.3
1,468,783	+				-0.8
1,468,783	+				+0.7
1,468,783	+				-0.1
1,468,783	+				-0.2
1,468,783	+				-0.8
1,468,783	+				-0.6
1,468,783	+				+0.4
1,468,784	-				-0.5
1,468,784	-				-0.4
1,468,784	-				+0.6
1,468,784	-				+0.6
1,468,784	-				+0.6
1,468,784	-				-0.1
1,468,784	-				-0.3
1,468,784	-				+0.7
1,468,784	-				-2.3
1,468,794	+				+1.1
1,468,811	-				+0.1
1,468,865	+		PFLU_RS06570	0.19	-0.3
1,468,866	-		PFLU_RS06570	0.19	+0.3
1,469,151	-		PFLU_RS06570	0.80	-0.2
1,469,151	-		PFLU_RS06570	0.80	+0.5
1,469,151	-		PFLU_RS06570	0.80	-0.3
1,469,151	-		PFLU_RS06570	0.80	-0.7
1,469,151	-		PFLU_RS06570	0.80	+0.2
1,469,151	-		PFLU_RS06570	0.80	+0.1
1,469,199	+				+0.3
1,469,199	+				+1.0
1,469,199	+				+0.8
1,469,221	+				+0.0
1,469,222	-				-0.4
1,469,222	-				+1.5
1,469,222	-				+0.5
1,469,222	-				+0.2
1,469,241	-				-0.2
1,469,253	+				+0.3
1,469,253	+				+1.1
1,469,253	+				+1.0
1,469,254	-				-0.3
1,469,254	-				-1.5
1,469,254	-				+0.2
1,469,254	-				-0.7
1,469,300	+				-1.7
1,469,300	+				-0.2
1,469,300	+				+0.7
1,469,300	+				+1.2
1,469,352	+				+0.2
1,469,352	+				-0.8
1,469,352	+				+0.1
1,469,352	+				-0.1
1,469,352	+				+0.6
1,469,352	+				+0.8
1,469,353	-				+0.8
1,469,353	-				+0.0
1,469,353	-				-0.1
1,469,353	-				-1.3
1,469,353	-				+0.1
1,469,353	-				-1.9
1,469,353	-				-1.2
1,469,356	-				-1.2
1,469,369	-				-0.2
1,469,445	+				-0.1
1,469,446	-				+0.1
1,469,460	+				+1.0
1,469,460	+				+0.8
1,469,461	-				-1.9
1,469,474	-				+0.9
1,469,486	+				+0.3
1,469,486	+				-0.7
1,469,486	+				-0.9
1,469,487	-				-0.3
1,469,487	-				+0.2
1,469,487	-				+0.1
1,469,487	-				-0.3
1,469,564	+				-0.1
1,469,564	+				-0.7
1,469,564	+				+1.1
1,469,565	-				+0.2
1,469,566	+				-0.3
1,469,566	+				+0.2
1,469,566	+				-1.4
1,469,566	+				+0.1
1,469,566	+				+2.2
1,469,566	+				+0.9
1,469,566	+				-2.5
1,469,567	-				+0.7
1,469,567	-				+0.2
1,469,567	-				+0.6
1,469,567	-				+1.5
1,469,567	-				-0.4
1,469,567	-				+0.5
1,469,567	-				-0.2
1,469,567	-				-0.8
1,469,567	-				+0.4
1,469,567	-				-0.8
1,469,567	-				+0.1
1,469,567	-				+0.3
1,469,567	-				+0.6
1,469,567	-				+0.4
1,469,567	-				+0.2
1,469,567	-				+0.6
1,469,567	-				+1.1
1,469,584	-				+0.1
1,469,641	+				-0.6
1,469,641	+				+1.6
1,469,641	+				+1.2
1,469,642	-				-1.7
1,469,642	-				-0.5
1,469,642	-				-0.0
1,469,642	-				-0.0
1,469,657	+				+0.0
1,470,887	-				-0.2
1,470,887	-				+0.6
1,470,908	-				-0.2
1,470,922	+				-1.0
1,470,951	+				-0.9
1,470,951	+				-0.2
1,470,951	+				-0.8
1,470,952	-				+0.3
1,470,957	+				-0.2
1,470,957	+				+0.1
1,470,957	+				-0.6
1,470,985	-				-0.5
1,470,989	+				+1.1
1,470,989	+				-0.7
1,470,989	+				-0.4
1,470,989	+				-0.6
1,470,989	+				-0.4
1,470,989	+				-0.3
1,470,989	+				+0.9
1,470,990	-				+0.2
1,470,990	-				+2.2
1,470,990	-				+0.4
1,470,990	-				-0.1
1,470,990	-				+0.7
1,470,990	-				-0.6
1,471,005	-				-2.3
1,471,005	-				+1.3
1,471,016	+				+0.4
1,471,016	+				+0.9
1,471,016	+				-0.9
1,471,171	+		PFLU_RS06580	0.11	-0.6
1,471,171	+		PFLU_RS06580	0.11	-3.6
1,471,171	+		PFLU_RS06580	0.11	-1.5
1,471,171	+		PFLU_RS06580	0.11	+0.0
1,471,171	+		PFLU_RS06580	0.11	-1.3
1,471,171	+		PFLU_RS06580	0.11	+1.0
1,471,172	-		PFLU_RS06580	0.11	-0.8
1,471,172	-		PFLU_RS06580	0.11	-0.1
1,471,172	-		PFLU_RS06580	0.11	+0.0
1,471,172	-		PFLU_RS06580	0.11	-1.8
1,471,172	-		PFLU_RS06580	0.11	-0.3
1,471,240	+		PFLU_RS06580	0.17	-2.9
1,471,240	+		PFLU_RS06580	0.17	-1.3
1,471,240	+		PFLU_RS06580	0.17	+0.2
1,471,240	+		PFLU_RS06580	0.17	-1.8
1,471,240	+		PFLU_RS06580	0.17	-0.1
1,471,241	-		PFLU_RS06580	0.17	-0.8
1,471,241	-		PFLU_RS06580	0.17	+0.8
1,471,321	+		PFLU_RS06580	0.25	-0.8
1,471,321	+		PFLU_RS06580	0.25	+0.5
1,471,321	+		PFLU_RS06580	0.25	-0.4
1,471,322	-		PFLU_RS06580	0.25	-0.1
1,471,322	-		PFLU_RS06580	0.25	+1.1
1,471,350	+		PFLU_RS06580	0.27	-0.0
1,471,351	-		PFLU_RS06580	0.27	+0.3
1,471,405	+		PFLU_RS06580	0.32	-0.6
1,471,405	+		PFLU_RS06580	0.32	+0.3
1,471,405	+		PFLU_RS06580	0.32	+0.7
1,471,405	+		PFLU_RS06580	0.32	+0.3
1,471,405	+		PFLU_RS06580	0.32	-1.8
1,471,405	+		PFLU_RS06580	0.32	+0.7
1,471,405	+		PFLU_RS06580	0.32	-0.3
1,471,405	+		PFLU_RS06580	0.32	+0.6
1,471,405	+		PFLU_RS06580	0.32	-0.3
1,471,405	+		PFLU_RS06580	0.32	+0.1
1,471,405	+		PFLU_RS06580	0.32	+0.1
1,471,406	-		PFLU_RS06580	0.32	+0.3
1,471,406	-		PFLU_RS06580	0.32	+0.4
1,471,406	-		PFLU_RS06580	0.32	+0.3
1,471,406	-		PFLU_RS06580	0.32	+0.2
1,471,406	-		PFLU_RS06580	0.32	+0.2
1,471,406	-		PFLU_RS06580	0.32	+0.4
1,471,447	+		PFLU_RS06580	0.36	-2.7
1,471,447	+		PFLU_RS06580	0.36	-0.6
1,471,447	+		PFLU_RS06580	0.36	-1.9
1,471,447	+		PFLU_RS06580	0.36	+1.2
1,471,447	+		PFLU_RS06580	0.36	-1.3
1,471,447	+		PFLU_RS06580	0.36	+0.3
1,471,448	-		PFLU_RS06580	0.36	+0.5
1,471,448	-		PFLU_RS06580	0.36	+0.6
1,471,448	-		PFLU_RS06580	0.36	+0.1
1,471,448	-		PFLU_RS06580	0.36	-0.7
1,471,448	-		PFLU_RS06580	0.36	-1.0
1,471,507	+		PFLU_RS06580	0.42	-0.6
1,471,507	+		PFLU_RS06580	0.42	+0.6
1,471,508	-		PFLU_RS06580	0.42	+0.1
1,471,508	-		PFLU_RS06580	0.42	+0.4
1,471,546	-		PFLU_RS06580	0.45	+0.3
1,471,546	-		PFLU_RS06580	0.45	+1.1
1,471,651	+		PFLU_RS06580	0.55	+0.5
1,471,651	+		PFLU_RS06580	0.55	-0.0
1,471,652	-		PFLU_RS06580	0.55	-1.8
1,471,723	+		PFLU_RS06580	0.61	+0.0
1,471,724	-		PFLU_RS06580	0.61	-0.4
1,471,724	-		PFLU_RS06580	0.61	-0.6