Experiment: succinate (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS03005 and PFLU_RS03010 are separated by 114 nucleotides PFLU_RS03010 and PFLU_RS03015 are separated by 168 nucleotides
PFLU_RS03005: PFLU_RS03005 - hybrid sensor histidine kinase/response regulator, at 690,811 to 693,582
_RS03005
PFLU_RS03010: PFLU_RS03010 - phosphoribosylamine--glycine ligase, at 693,697 to 694,989
_RS03010
PFLU_RS03015: PFLU_RS03015 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH, at 695,158 to 696,765
_RS03015
Position (kb) 693
694
695 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 692.700 kb on - strand, within PFLU_RS03005 at 692.700 kb on - strand, within PFLU_RS03005 at 693.000 kb on - strand, within PFLU_RS03005 at 693.059 kb on + strand, within PFLU_RS03005 at 693.116 kb on + strand, within PFLU_RS03005 at 693.116 kb on + strand, within PFLU_RS03005 at 693.117 kb on - strand, within PFLU_RS03005 at 693.153 kb on - strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.281 kb on + strand, within PFLU_RS03005 at 693.282 kb on - strand, within PFLU_RS03005 at 693.282 kb on - strand, within PFLU_RS03005 at 693.358 kb on + strand at 693.559 kb on + strand at 693.559 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.598 kb on + strand at 693.599 kb on - strand at 693.599 kb on - strand at 693.599 kb on - strand at 693.616 kb on - strand at 693.616 kb on - strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.619 kb on + strand at 693.620 kb on - strand at 693.620 kb on - strand at 693.620 kb on - strand at 693.620 kb on - strand at 693.620 kb on - strand at 693.681 kb on + strand at 693.681 kb on + strand at 693.681 kb on + strand at 693.681 kb on + strand at 693.682 kb on - strand at 693.682 kb on - strand at 693.682 kb on - strand at 693.698 kb on + strand at 693.698 kb on + strand at 693.698 kb on + strand at 693.698 kb on + strand at 693.698 kb on + strand at 693.699 kb on - strand at 693.699 kb on - strand at 693.699 kb on - strand at 694.069 kb on + strand, within PFLU_RS03010 at 694.295 kb on + strand, within PFLU_RS03010 at 695.011 kb on - strand at 695.030 kb on + strand at 695.030 kb on + strand at 695.030 kb on + strand at 695.030 kb on + strand at 695.031 kb on - strand at 695.031 kb on - strand at 695.031 kb on - strand at 695.133 kb on - strand at 695.979 kb on - strand, within PFLU_RS03015
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C); with MOPS remove 692,700 - PFLU_RS03005 0.68 +1.3 692,700 - PFLU_RS03005 0.68 +1.3 693,000 - PFLU_RS03005 0.79 +0.7 693,059 + PFLU_RS03005 0.81 +2.3 693,116 + PFLU_RS03005 0.83 -0.5 693,116 + PFLU_RS03005 0.83 +1.3 693,117 - PFLU_RS03005 0.83 +0.3 693,153 - PFLU_RS03005 0.84 +0.3 693,281 + PFLU_RS03005 0.89 +0.7 693,281 + PFLU_RS03005 0.89 +0.7 693,281 + PFLU_RS03005 0.89 +0.3 693,281 + PFLU_RS03005 0.89 +2.3 693,281 + PFLU_RS03005 0.89 +2.3 693,281 + PFLU_RS03005 0.89 +0.7 693,282 - PFLU_RS03005 0.89 +3.9 693,282 - PFLU_RS03005 0.89 +1.3 693,358 + +0.7 693,559 + +1.3 693,559 + +0.3 693,598 + +2.3 693,598 + +1.4 693,598 + +0.1 693,598 + -0.4 693,598 + +0.5 693,598 + +0.2 693,598 + -0.3 693,599 - -0.3 693,599 - +0.0 693,599 - +0.1 693,616 - +0.3 693,616 - +0.3 693,619 + +0.7 693,619 + -0.7 693,619 + -0.5 693,619 + +0.3 693,619 + -1.3 693,619 + -0.1 693,619 + +0.1 693,619 + -0.9 693,619 + -0.1 693,620 - -1.9 693,620 - +0.5 693,620 - -1.0 693,620 - -0.6 693,620 - +0.0 693,681 + +0.9 693,681 + -0.7 693,681 + +1.0 693,681 + -1.3 693,682 - -0.9 693,682 - +0.4 693,682 - +1.0 693,698 + +0.7 693,698 + +0.0 693,698 + +0.6 693,698 + +0.3 693,698 + +0.1 693,699 - +1.0 693,699 - -0.8 693,699 - -1.3 694,069 + PFLU_RS03010 0.29 +1.3 694,295 + PFLU_RS03010 0.46 +0.3 695,011 - +0.4 695,030 + -0.9 695,030 + +0.5 695,030 + -1.8 695,030 + -0.6 695,031 - +1.6 695,031 - -0.4 695,031 - -2.3 695,133 - -0.7 695,979 - PFLU_RS03015 0.51 -0.0
Or see this region's nucleotide sequence