Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_14780 and OH686_14785 are separated by 231 nucleotides OH686_14785 and OH686_14790 are separated by 8 nucleotides OH686_14790 and OH686_14795 are separated by 126 nucleotides
OH686_14780: OH686_14780 - HD-GYP domain, at 3,106,457 to 3,107,701
_14780
OH686_14785: OH686_14785 - hypothetical protein, at 3,107,933 to 3,108,100
_14785
OH686_14790: OH686_14790 - hypothetical protein, at 3,108,109 to 3,108,939
_14790
OH686_14795: OH686_14795 - hypothetical protein, at 3,109,066 to 3,110,169
_14795
Position (kb)
3107
3108
3109 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3106.940 kb on + strand, within OH686_14780 at 3106.940 kb on + strand, within OH686_14780 at 3106.940 kb on + strand, within OH686_14780 at 3106.940 kb on + strand, within OH686_14780 at 3106.940 kb on + strand, within OH686_14780 at 3106.941 kb on - strand, within OH686_14780 at 3106.941 kb on - strand, within OH686_14780 at 3106.941 kb on - strand, within OH686_14780 at 3106.941 kb on - strand, within OH686_14780 at 3106.941 kb on - strand, within OH686_14780 at 3106.941 kb on - strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.946 kb on + strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3106.947 kb on - strand, within OH686_14780 at 3107.082 kb on + strand, within OH686_14780 at 3107.082 kb on + strand, within OH686_14780 at 3107.082 kb on + strand, within OH686_14780 at 3107.083 kb on - strand, within OH686_14780 at 3107.083 kb on - strand, within OH686_14780 at 3107.083 kb on - strand, within OH686_14780 at 3107.303 kb on + strand, within OH686_14780 at 3107.303 kb on + strand, within OH686_14780 at 3107.303 kb on + strand, within OH686_14780 at 3107.303 kb on + strand, within OH686_14780 at 3107.304 kb on - strand, within OH686_14780 at 3107.304 kb on - strand, within OH686_14780 at 3107.304 kb on - strand, within OH686_14780 at 3107.330 kb on + strand, within OH686_14780 at 3107.330 kb on + strand, within OH686_14780 at 3107.330 kb on + strand, within OH686_14780 at 3107.330 kb on + strand, within OH686_14780 at 3107.331 kb on - strand, within OH686_14780 at 3107.331 kb on - strand, within OH686_14780 at 3107.331 kb on - strand, within OH686_14780 at 3107.331 kb on - strand, within OH686_14780 at 3107.403 kb on + strand, within OH686_14780 at 3107.404 kb on - strand, within OH686_14780 at 3107.404 kb on - strand, within OH686_14780 at 3107.404 kb on - strand, within OH686_14780 at 3107.404 kb on - strand, within OH686_14780 at 3107.436 kb on - strand, within OH686_14780 at 3107.436 kb on - strand, within OH686_14780 at 3107.607 kb on + strand at 3107.722 kb on + strand at 3107.722 kb on + strand at 3107.722 kb on + strand at 3107.722 kb on + strand at 3107.722 kb on + strand at 3107.722 kb on + strand at 3107.723 kb on - strand at 3107.723 kb on - strand at 3107.723 kb on - strand at 3107.723 kb on - strand at 3107.907 kb on - strand at 3107.907 kb on - strand at 3107.907 kb on - strand at 3107.944 kb on - strand at 3107.988 kb on + strand, within OH686_14785 at 3107.988 kb on + strand, within OH686_14785 at 3107.988 kb on + strand, within OH686_14785 at 3107.988 kb on + strand, within OH686_14785 at 3107.988 kb on + strand, within OH686_14785 at 3107.988 kb on + strand, within OH686_14785 at 3107.989 kb on - strand, within OH686_14785 at 3107.989 kb on - strand, within OH686_14785 at 3107.989 kb on - strand, within OH686_14785 at 3108.014 kb on - strand, within OH686_14785 at 3108.098 kb on + strand at 3108.098 kb on + strand at 3108.098 kb on + strand at 3108.214 kb on + strand, within OH686_14790 at 3108.214 kb on + strand, within OH686_14790 at 3108.214 kb on + strand, within OH686_14790 at 3108.214 kb on + strand, within OH686_14790 at 3108.214 kb on + strand, within OH686_14790 at 3108.214 kb on + strand, within OH686_14790 at 3108.214 kb on + strand, within OH686_14790 at 3108.214 kb on + strand, within OH686_14790 at 3108.214 kb on + strand, within OH686_14790 at 3108.214 kb on + strand, within OH686_14790 at 3108.214 kb on + strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.215 kb on - strand, within OH686_14790 at 3108.223 kb on + strand, within OH686_14790 at 3108.223 kb on + strand, within OH686_14790 at 3108.223 kb on + strand, within OH686_14790 at 3108.223 kb on + strand, within OH686_14790 at 3108.223 kb on + strand, within OH686_14790 at 3108.223 kb on + strand, within OH686_14790 at 3108.223 kb on + strand, within OH686_14790 at 3108.223 kb on + strand, within OH686_14790 at 3108.223 kb on + strand, within OH686_14790 at 3108.224 kb on - strand, within OH686_14790 at 3108.224 kb on - strand, within OH686_14790 at 3108.224 kb on - strand, within OH686_14790 at 3108.224 kb on - strand, within OH686_14790 at 3108.224 kb on - strand, within OH686_14790 at 3108.224 kb on - strand, within OH686_14790 at 3108.224 kb on - strand, within OH686_14790 at 3108.224 kb on - strand, within OH686_14790 at 3108.224 kb on - strand, within OH686_14790 at 3108.235 kb on + strand, within OH686_14790 at 3108.236 kb on - strand, within OH686_14790 at 3108.679 kb on + strand, within OH686_14790 at 3108.679 kb on + strand, within OH686_14790 at 3108.679 kb on + strand, within OH686_14790 at 3108.679 kb on + strand, within OH686_14790 at 3108.679 kb on + strand, within OH686_14790 at 3108.679 kb on + strand, within OH686_14790 at 3108.679 kb on + strand, within OH686_14790 at 3108.679 kb on + strand, within OH686_14790 at 3108.680 kb on - strand, within OH686_14790 at 3108.680 kb on - strand, within OH686_14790 at 3108.734 kb on - strand, within OH686_14790 at 3108.739 kb on + strand, within OH686_14790 at 3108.739 kb on + strand, within OH686_14790 at 3108.739 kb on + strand, within OH686_14790 at 3108.739 kb on + strand, within OH686_14790 at 3108.740 kb on - strand, within OH686_14790 at 3108.740 kb on - strand, within OH686_14790 at 3108.740 kb on - strand, within OH686_14790 at 3108.740 kb on - strand, within OH686_14790 at 3109.037 kb on + strand at 3109.038 kb on - strand at 3109.072 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 3,106,940 + OH686_14780 0.39 -0.7 3,106,940 + OH686_14780 0.39 +0.1 3,106,940 + OH686_14780 0.39 +0.7 3,106,940 + OH686_14780 0.39 +1.1 3,106,940 + OH686_14780 0.39 -0.9 3,106,941 - OH686_14780 0.39 -0.3 3,106,941 - OH686_14780 0.39 +0.3 3,106,941 - OH686_14780 0.39 -0.5 3,106,941 - OH686_14780 0.39 -0.5 3,106,941 - OH686_14780 0.39 -0.3 3,106,941 - OH686_14780 0.39 -0.9 3,106,946 + OH686_14780 0.39 -0.8 3,106,946 + OH686_14780 0.39 -0.5 3,106,946 + OH686_14780 0.39 +1.0 3,106,946 + OH686_14780 0.39 +0.1 3,106,946 + OH686_14780 0.39 +0.6 3,106,946 + OH686_14780 0.39 -1.6 3,106,946 + OH686_14780 0.39 +0.2 3,106,946 + OH686_14780 0.39 -1.2 3,106,946 + OH686_14780 0.39 +0.7 3,106,946 + OH686_14780 0.39 -0.1 3,106,946 + OH686_14780 0.39 +1.7 3,106,946 + OH686_14780 0.39 -0.7 3,106,946 + OH686_14780 0.39 +0.7 3,106,946 + OH686_14780 0.39 +0.8 3,106,946 + OH686_14780 0.39 -0.1 3,106,946 + OH686_14780 0.39 +0.0 3,106,946 + OH686_14780 0.39 +0.1 3,106,946 + OH686_14780 0.39 +0.0 3,106,946 + OH686_14780 0.39 +0.6 3,106,946 + OH686_14780 0.39 +0.4 3,106,946 + OH686_14780 0.39 -1.9 3,106,946 + OH686_14780 0.39 -1.1 3,106,946 + OH686_14780 0.39 +0.4 3,106,946 + OH686_14780 0.39 -0.4 3,106,946 + OH686_14780 0.39 +0.4 3,106,946 + OH686_14780 0.39 +0.5 3,106,946 + OH686_14780 0.39 -0.2 3,106,946 + OH686_14780 0.39 -0.1 3,106,946 + OH686_14780 0.39 -0.3 3,106,946 + OH686_14780 0.39 +0.1 3,106,946 + OH686_14780 0.39 +0.2 3,106,946 + OH686_14780 0.39 +0.9 3,106,946 + OH686_14780 0.39 +0.3 3,106,946 + OH686_14780 0.39 +0.6 3,106,946 + OH686_14780 0.39 -0.8 3,106,946 + OH686_14780 0.39 -0.2 3,106,946 + OH686_14780 0.39 +1.1 3,106,947 - OH686_14780 0.39 +0.4 3,106,947 - OH686_14780 0.39 +0.1 3,106,947 - OH686_14780 0.39 +0.4 3,106,947 - OH686_14780 0.39 -0.1 3,106,947 - OH686_14780 0.39 -0.6 3,106,947 - OH686_14780 0.39 -0.1 3,106,947 - OH686_14780 0.39 +0.5 3,106,947 - OH686_14780 0.39 -0.4 3,106,947 - OH686_14780 0.39 -0.6 3,106,947 - OH686_14780 0.39 -1.1 3,106,947 - OH686_14780 0.39 +1.3 3,106,947 - OH686_14780 0.39 -0.7 3,106,947 - OH686_14780 0.39 -0.1 3,106,947 - OH686_14780 0.39 +0.2 3,106,947 - OH686_14780 0.39 -0.8 3,106,947 - OH686_14780 0.39 -1.0 3,106,947 - OH686_14780 0.39 +0.7 3,106,947 - OH686_14780 0.39 +0.8 3,106,947 - OH686_14780 0.39 +0.4 3,106,947 - OH686_14780 0.39 +0.9 3,106,947 - OH686_14780 0.39 +0.0 3,106,947 - OH686_14780 0.39 -0.3 3,106,947 - OH686_14780 0.39 -0.1 3,106,947 - OH686_14780 0.39 -0.4 3,106,947 - OH686_14780 0.39 +0.9 3,106,947 - OH686_14780 0.39 +0.6 3,106,947 - OH686_14780 0.39 -0.6 3,107,082 + OH686_14780 0.50 -1.1 3,107,082 + OH686_14780 0.50 +1.8 3,107,082 + OH686_14780 0.50 +0.9 3,107,083 - OH686_14780 0.50 +0.1 3,107,083 - OH686_14780 0.50 +0.2 3,107,083 - OH686_14780 0.50 +0.2 3,107,303 + OH686_14780 0.68 +0.1 3,107,303 + OH686_14780 0.68 -1.1 3,107,303 + OH686_14780 0.68 +1.3 3,107,303 + OH686_14780 0.68 -0.2 3,107,304 - OH686_14780 0.68 -0.1 3,107,304 - OH686_14780 0.68 +0.2 3,107,304 - OH686_14780 0.68 +1.0 3,107,330 + OH686_14780 0.70 +0.2 3,107,330 + OH686_14780 0.70 -0.4 3,107,330 + OH686_14780 0.70 -0.2 3,107,330 + OH686_14780 0.70 +0.3 3,107,331 - OH686_14780 0.70 +1.0 3,107,331 - OH686_14780 0.70 -0.1 3,107,331 - OH686_14780 0.70 -0.0 3,107,331 - OH686_14780 0.70 -0.0 3,107,403 + OH686_14780 0.76 +0.9 3,107,404 - OH686_14780 0.76 +0.3 3,107,404 - OH686_14780 0.76 +0.2 3,107,404 - OH686_14780 0.76 +1.1 3,107,404 - OH686_14780 0.76 -2.1 3,107,436 - OH686_14780 0.79 -0.2 3,107,436 - OH686_14780 0.79 +0.9 3,107,607 + -0.4 3,107,722 + +1.0 3,107,722 + -0.3 3,107,722 + +0.3 3,107,722 + +0.6 3,107,722 + -1.4 3,107,722 + -1.4 3,107,723 - +0.2 3,107,723 - -0.7 3,107,723 - -0.9 3,107,723 - -0.5 3,107,907 - +0.8 3,107,907 - -0.0 3,107,907 - +0.3 3,107,944 - -1.4 3,107,988 + OH686_14785 0.33 -1.4 3,107,988 + OH686_14785 0.33 +0.1 3,107,988 + OH686_14785 0.33 -0.3 3,107,988 + OH686_14785 0.33 +1.0 3,107,988 + OH686_14785 0.33 -0.0 3,107,988 + OH686_14785 0.33 +1.3 3,107,989 - OH686_14785 0.33 -1.2 3,107,989 - OH686_14785 0.33 -0.3 3,107,989 - OH686_14785 0.33 -0.0 3,108,014 - OH686_14785 0.48 -0.6 3,108,098 + -0.4 3,108,098 + +1.3 3,108,098 + +0.6 3,108,214 + OH686_14790 0.13 +0.3 3,108,214 + OH686_14790 0.13 -0.1 3,108,214 + OH686_14790 0.13 +0.9 3,108,214 + OH686_14790 0.13 -1.3 3,108,214 + OH686_14790 0.13 -0.1 3,108,214 + OH686_14790 0.13 +0.6 3,108,214 + OH686_14790 0.13 -2.2 3,108,214 + OH686_14790 0.13 -0.1 3,108,214 + OH686_14790 0.13 -0.4 3,108,214 + OH686_14790 0.13 -0.7 3,108,214 + OH686_14790 0.13 -0.6 3,108,215 - OH686_14790 0.13 -0.8 3,108,215 - OH686_14790 0.13 +0.0 3,108,215 - OH686_14790 0.13 -1.2 3,108,215 - OH686_14790 0.13 -0.1 3,108,215 - OH686_14790 0.13 +0.2 3,108,215 - OH686_14790 0.13 -0.3 3,108,215 - OH686_14790 0.13 -0.6 3,108,215 - OH686_14790 0.13 +0.2 3,108,215 - OH686_14790 0.13 +0.6 3,108,215 - OH686_14790 0.13 -2.1 3,108,215 - OH686_14790 0.13 -0.3 3,108,215 - OH686_14790 0.13 +0.1 3,108,215 - OH686_14790 0.13 -0.3 3,108,215 - OH686_14790 0.13 +0.0 3,108,215 - OH686_14790 0.13 -0.6 3,108,223 + OH686_14790 0.14 -0.7 3,108,223 + OH686_14790 0.14 -0.6 3,108,223 + OH686_14790 0.14 -1.7 3,108,223 + OH686_14790 0.14 -0.1 3,108,223 + OH686_14790 0.14 +0.2 3,108,223 + OH686_14790 0.14 -1.3 3,108,223 + OH686_14790 0.14 +0.2 3,108,223 + OH686_14790 0.14 +0.3 3,108,223 + OH686_14790 0.14 -0.1 3,108,224 - OH686_14790 0.14 +0.2 3,108,224 - OH686_14790 0.14 +0.3 3,108,224 - OH686_14790 0.14 -0.7 3,108,224 - OH686_14790 0.14 +0.0 3,108,224 - OH686_14790 0.14 -0.3 3,108,224 - OH686_14790 0.14 +0.6 3,108,224 - OH686_14790 0.14 -0.2 3,108,224 - OH686_14790 0.14 -0.1 3,108,224 - OH686_14790 0.14 +0.4 3,108,235 + OH686_14790 0.15 +0.3 3,108,236 - OH686_14790 0.15 -0.8 3,108,679 + OH686_14790 0.69 +0.3 3,108,679 + OH686_14790 0.69 +0.0 3,108,679 + OH686_14790 0.69 +0.9 3,108,679 + OH686_14790 0.69 +0.2 3,108,679 + OH686_14790 0.69 +0.4 3,108,679 + OH686_14790 0.69 +0.3 3,108,679 + OH686_14790 0.69 +0.4 3,108,679 + OH686_14790 0.69 +0.3 3,108,680 - OH686_14790 0.69 -1.1 3,108,680 - OH686_14790 0.69 +1.1 3,108,734 - OH686_14790 0.75 -0.6 3,108,739 + OH686_14790 0.76 -1.8 3,108,739 + OH686_14790 0.76 -1.3 3,108,739 + OH686_14790 0.76 +0.8 3,108,739 + OH686_14790 0.76 -0.6 3,108,740 - OH686_14790 0.76 +0.7 3,108,740 - OH686_14790 0.76 -0.0 3,108,740 - OH686_14790 0.76 +0.8 3,108,740 - OH686_14790 0.76 -1.1 3,109,037 + +0.3 3,109,038 - +0.5 3,109,072 + -0.2
Or see this region's nucleotide sequence