Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_12635 and OH686_12640 are separated by 13 nucleotides OH686_12640 and OH686_12645 overlap by 8 nucleotides OH686_12645 and OH686_12650 are separated by 3 nucleotides
OH686_12635: OH686_12635 - ribosomal protein L34, at 2,657,417 to 2,657,551
_12635
OH686_12640: OH686_12640 - ribonuclease P protein component, at 2,657,565 to 2,657,960
_12640
OH686_12645: OH686_12645 - putative membrane protein insertion efficiency factor, at 2,657,953 to 2,658,189
_12645
OH686_12650: OH686_12650 - Inner membrane protein translocase and chaperone YidC, long form, at 2,658,193 to 2,659,863
_12650
Position (kb)
2657
2658
2659 Strain fitness (log2 ratio)
-1
0
1 at 2656.964 kb on - strand at 2657.007 kb on + strand at 2657.008 kb on - strand at 2657.011 kb on + strand at 2657.012 kb on - strand at 2657.060 kb on + strand at 2657.060 kb on + strand at 2657.061 kb on - strand at 2657.061 kb on - strand at 2657.061 kb on - strand at 2657.061 kb on - strand at 2657.061 kb on - strand at 2657.076 kb on - strand at 2657.076 kb on - strand at 2657.089 kb on + strand at 2657.117 kb on - strand at 2657.185 kb on + strand at 2657.185 kb on + strand at 2657.186 kb on - strand at 2657.251 kb on - strand at 2657.253 kb on + strand at 2657.253 kb on + strand at 2657.253 kb on + strand at 2657.253 kb on + strand at 2657.253 kb on + strand at 2657.253 kb on + strand at 2657.254 kb on - strand at 2657.260 kb on + strand at 2657.260 kb on + strand at 2657.260 kb on + strand at 2657.260 kb on + strand at 2657.260 kb on + strand at 2657.261 kb on - strand at 2657.261 kb on - strand at 2657.266 kb on + strand at 2657.266 kb on + strand at 2657.267 kb on - strand at 2657.267 kb on - strand at 2657.296 kb on + strand at 2657.296 kb on + strand at 2657.305 kb on + strand at 2657.305 kb on + strand at 2657.306 kb on - strand at 2657.306 kb on - strand at 2657.306 kb on - strand at 2657.306 kb on - strand at 2657.306 kb on - strand at 2657.552 kb on + strand at 2657.552 kb on + strand at 2657.938 kb on + strand at 2657.958 kb on + strand at 2657.958 kb on + strand at 2657.972 kb on + strand at 2658.031 kb on + strand, within OH686_12645 at 2658.031 kb on + strand, within OH686_12645 at 2658.049 kb on + strand, within OH686_12645 at 2658.049 kb on + strand, within OH686_12645 at 2658.049 kb on + strand, within OH686_12645 at 2658.049 kb on + strand, within OH686_12645 at 2658.049 kb on + strand, within OH686_12645 at 2658.049 kb on + strand, within OH686_12645 at 2658.049 kb on + strand, within OH686_12645 at 2658.049 kb on + strand, within OH686_12645 at 2658.145 kb on + strand, within OH686_12645 at 2658.145 kb on + strand, within OH686_12645
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 2,656,964 - -1.1 2,657,007 + -0.1 2,657,008 - -0.2 2,657,011 + -0.7 2,657,012 - -0.3 2,657,060 + +0.5 2,657,060 + -1.0 2,657,061 - -1.5 2,657,061 - +0.4 2,657,061 - -1.7 2,657,061 - -1.1 2,657,061 - -0.4 2,657,076 - +0.4 2,657,076 - +0.3 2,657,089 + -0.4 2,657,117 - -0.7 2,657,185 + -0.1 2,657,185 + -1.4 2,657,186 - +0.1 2,657,251 - +0.3 2,657,253 + +0.8 2,657,253 + -0.1 2,657,253 + +0.7 2,657,253 + -0.4 2,657,253 + +0.1 2,657,253 + +0.2 2,657,254 - -0.7 2,657,260 + -0.2 2,657,260 + +0.8 2,657,260 + -1.1 2,657,260 + +0.1 2,657,260 + +0.1 2,657,261 - -1.2 2,657,261 - +0.3 2,657,266 + -0.1 2,657,266 + +0.1 2,657,267 - -0.5 2,657,267 - -0.3 2,657,296 + +1.1 2,657,296 + -0.3 2,657,305 + +0.5 2,657,305 + +0.2 2,657,306 - -0.2 2,657,306 - -0.8 2,657,306 - +0.3 2,657,306 - -0.6 2,657,306 - -0.1 2,657,552 + -0.2 2,657,552 + -0.8 2,657,938 + -1.0 2,657,958 + -0.9 2,657,958 + +0.0 2,657,972 + -0.2 2,658,031 + OH686_12645 0.33 +0.1 2,658,031 + OH686_12645 0.33 -0.4 2,658,049 + OH686_12645 0.41 -0.9 2,658,049 + OH686_12645 0.41 -0.7 2,658,049 + OH686_12645 0.41 +0.5 2,658,049 + OH686_12645 0.41 -0.6 2,658,049 + OH686_12645 0.41 -0.5 2,658,049 + OH686_12645 0.41 -1.3 2,658,049 + OH686_12645 0.41 -0.8 2,658,049 + OH686_12645 0.41 -0.6 2,658,145 + OH686_12645 0.81 -0.6 2,658,145 + OH686_12645 0.81 -0.9
Or see this region's nucleotide sequence