Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_00885 and OH686_00890 are separated by 107 nucleotides OH686_00890 and OH686_00895 overlap by 1 nucleotides OH686_00895 and OH686_00900 are separated by 261 nucleotides
OH686_00885: OH686_00885 - Acyl-CoA dehydrogenase, at 176,723 to 177,952
_00885
OH686_00890: OH686_00890 - hypothetical protein, at 178,060 to 178,242
_00890
OH686_00895: OH686_00895 - Integral membrane protein TerC, at 178,242 to 179,228
_00895
OH686_00900: OH686_00900 - Phosphate-binding protein, at 179,490 to 180,851
_00900
Position (kb) 178
179
180 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 177.431 kb on + strand, within OH686_00885 at 177.670 kb on - strand, within OH686_00885 at 177.670 kb on - strand, within OH686_00885 at 177.670 kb on - strand, within OH686_00885 at 177.680 kb on + strand, within OH686_00885 at 177.680 kb on + strand, within OH686_00885 at 177.680 kb on + strand, within OH686_00885 at 177.680 kb on + strand, within OH686_00885 at 177.680 kb on + strand, within OH686_00885 at 177.680 kb on + strand, within OH686_00885 at 177.681 kb on - strand, within OH686_00885 at 177.681 kb on - strand, within OH686_00885 at 177.681 kb on - strand, within OH686_00885 at 177.681 kb on - strand, within OH686_00885 at 177.681 kb on - strand, within OH686_00885 at 177.681 kb on - strand, within OH686_00885 at 177.681 kb on - strand, within OH686_00885 at 177.827 kb on + strand, within OH686_00885 at 177.828 kb on - strand, within OH686_00885 at 177.833 kb on + strand at 177.833 kb on + strand at 177.834 kb on - strand at 177.834 kb on - strand at 177.834 kb on - strand at 177.834 kb on - strand at 177.879 kb on + strand at 177.880 kb on - strand at 177.880 kb on - strand at 177.880 kb on - strand at 177.880 kb on - strand at 177.880 kb on - strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.917 kb on + strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 177.918 kb on - strand at 178.004 kb on + strand at 178.004 kb on + strand at 178.005 kb on - strand at 178.005 kb on - strand at 178.013 kb on - strand at 178.013 kb on - strand at 178.013 kb on - strand at 178.028 kb on - strand at 178.028 kb on - strand at 178.028 kb on - strand at 178.028 kb on - strand at 178.028 kb on - strand at 178.028 kb on - strand at 178.186 kb on + strand, within OH686_00890 at 178.186 kb on + strand, within OH686_00890 at 178.186 kb on + strand, within OH686_00890 at 178.186 kb on + strand, within OH686_00890 at 178.187 kb on - strand, within OH686_00890 at 178.187 kb on - strand, within OH686_00890 at 178.187 kb on - strand, within OH686_00890 at 178.187 kb on - strand, within OH686_00890 at 178.187 kb on - strand, within OH686_00890 at 178.314 kb on + strand at 178.405 kb on + strand, within OH686_00895 at 178.405 kb on + strand, within OH686_00895 at 178.405 kb on + strand, within OH686_00895 at 178.405 kb on + strand, within OH686_00895 at 178.405 kb on + strand, within OH686_00895 at 178.405 kb on + strand, within OH686_00895 at 178.405 kb on + strand, within OH686_00895 at 178.406 kb on - strand, within OH686_00895 at 178.406 kb on - strand, within OH686_00895 at 178.406 kb on - strand, within OH686_00895 at 178.414 kb on + strand, within OH686_00895 at 178.414 kb on + strand, within OH686_00895 at 178.414 kb on + strand, within OH686_00895 at 178.415 kb on - strand, within OH686_00895 at 178.415 kb on - strand, within OH686_00895 at 178.415 kb on - strand, within OH686_00895 at 178.450 kb on + strand, within OH686_00895 at 178.450 kb on + strand, within OH686_00895 at 178.451 kb on - strand, within OH686_00895 at 178.492 kb on + strand, within OH686_00895 at 178.492 kb on + strand, within OH686_00895 at 178.492 kb on + strand, within OH686_00895 at 178.492 kb on + strand, within OH686_00895 at 178.492 kb on + strand, within OH686_00895 at 178.603 kb on + strand, within OH686_00895 at 178.603 kb on + strand, within OH686_00895 at 178.603 kb on + strand, within OH686_00895 at 178.604 kb on - strand, within OH686_00895 at 178.790 kb on + strand, within OH686_00895 at 178.790 kb on + strand, within OH686_00895 at 178.790 kb on + strand, within OH686_00895 at 178.790 kb on + strand, within OH686_00895 at 178.790 kb on + strand, within OH686_00895 at 178.790 kb on + strand, within OH686_00895 at 178.791 kb on - strand, within OH686_00895 at 178.791 kb on - strand, within OH686_00895 at 178.791 kb on - strand, within OH686_00895 at 178.791 kb on - strand, within OH686_00895 at 178.791 kb on - strand, within OH686_00895 at 178.791 kb on - strand, within OH686_00895 at 178.791 kb on - strand, within OH686_00895 at 178.792 kb on + strand, within OH686_00895 at 178.792 kb on + strand, within OH686_00895 at 178.792 kb on + strand, within OH686_00895 at 178.792 kb on + strand, within OH686_00895 at 178.792 kb on + strand, within OH686_00895 at 178.792 kb on + strand, within OH686_00895 at 178.792 kb on + strand, within OH686_00895 at 178.792 kb on + strand, within OH686_00895 at 178.792 kb on + strand, within OH686_00895 at 178.792 kb on + strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.793 kb on - strand, within OH686_00895 at 178.897 kb on + strand, within OH686_00895 at 178.898 kb on - strand, within OH686_00895 at 178.987 kb on + strand, within OH686_00895 at 178.987 kb on + strand, within OH686_00895 at 178.987 kb on + strand, within OH686_00895 at 178.988 kb on - strand, within OH686_00895 at 178.988 kb on - strand, within OH686_00895 at 178.988 kb on - strand, within OH686_00895 at 178.988 kb on - strand, within OH686_00895 at 178.988 kb on - strand, within OH686_00895 at 178.988 kb on - strand, within OH686_00895 at 179.021 kb on - strand, within OH686_00895 at 179.059 kb on + strand, within OH686_00895 at 179.059 kb on + strand, within OH686_00895 at 179.060 kb on - strand, within OH686_00895 at 179.060 kb on - strand, within OH686_00895 at 179.060 kb on - strand, within OH686_00895 at 179.060 kb on - strand, within OH686_00895 at 179.068 kb on + strand, within OH686_00895 at 179.068 kb on + strand, within OH686_00895 at 179.068 kb on + strand, within OH686_00895 at 179.069 kb on - strand, within OH686_00895 at 179.069 kb on - strand, within OH686_00895 at 179.069 kb on - strand, within OH686_00895 at 179.069 kb on - strand, within OH686_00895 at 179.069 kb on - strand, within OH686_00895 at 179.069 kb on - strand, within OH686_00895 at 179.217 kb on + strand at 179.217 kb on + strand at 179.217 kb on + strand at 179.217 kb on + strand at 179.218 kb on - strand at 179.218 kb on - strand at 179.218 kb on - strand at 179.342 kb on + strand at 179.342 kb on + strand at 179.342 kb on + strand at 179.342 kb on + strand at 179.342 kb on + strand at 179.342 kb on + strand at 179.342 kb on + strand at 179.343 kb on - strand at 179.343 kb on - strand at 179.494 kb on + strand at 179.494 kb on + strand at 179.494 kb on + strand at 179.494 kb on + strand at 179.494 kb on + strand at 179.494 kb on + strand at 179.495 kb on - strand at 179.495 kb on - strand at 179.495 kb on - strand at 179.495 kb on - strand at 179.495 kb on - strand at 179.495 kb on - strand at 179.495 kb on - strand at 179.496 kb on + strand at 179.496 kb on + strand at 179.496 kb on + strand at 179.496 kb on + strand at 179.496 kb on + strand at 179.496 kb on + strand at 179.496 kb on + strand at 179.496 kb on + strand at 179.496 kb on + strand at 179.497 kb on - strand at 179.497 kb on - strand at 179.497 kb on - strand at 179.698 kb on - strand, within OH686_00900 at 179.698 kb on - strand, within OH686_00900 at 179.698 kb on - strand, within OH686_00900 at 179.734 kb on + strand, within OH686_00900 at 179.734 kb on + strand, within OH686_00900 at 179.734 kb on + strand, within OH686_00900 at 179.734 kb on + strand, within OH686_00900 at 179.735 kb on - strand, within OH686_00900 at 179.845 kb on + strand, within OH686_00900 at 179.984 kb on + strand, within OH686_00900 at 179.998 kb on + strand, within OH686_00900 at 179.998 kb on + strand, within OH686_00900 at 179.998 kb on + strand, within OH686_00900 at 179.999 kb on - strand, within OH686_00900 at 179.999 kb on - strand, within OH686_00900 at 179.999 kb on - strand, within OH686_00900 at 180.025 kb on + strand, within OH686_00900 at 180.026 kb on - strand, within OH686_00900 at 180.112 kb on + strand, within OH686_00900 at 180.112 kb on + strand, within OH686_00900 at 180.112 kb on + strand, within OH686_00900 at 180.113 kb on - strand, within OH686_00900 at 180.113 kb on - strand, within OH686_00900
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 177,431 + OH686_00885 0.58 -2.0 177,670 - OH686_00885 0.77 -1.8 177,670 - OH686_00885 0.77 +0.1 177,670 - OH686_00885 0.77 +0.1 177,680 + OH686_00885 0.78 -0.1 177,680 + OH686_00885 0.78 -0.9 177,680 + OH686_00885 0.78 -0.7 177,680 + OH686_00885 0.78 +0.6 177,680 + OH686_00885 0.78 +1.7 177,680 + OH686_00885 0.78 +0.4 177,681 - OH686_00885 0.78 +1.1 177,681 - OH686_00885 0.78 -1.1 177,681 - OH686_00885 0.78 -0.3 177,681 - OH686_00885 0.78 -0.4 177,681 - OH686_00885 0.78 +0.1 177,681 - OH686_00885 0.78 +0.8 177,681 - OH686_00885 0.78 +0.4 177,827 + OH686_00885 0.90 +0.1 177,828 - OH686_00885 0.90 -0.7 177,833 + -1.4 177,833 + -1.1 177,834 - +0.8 177,834 - +0.6 177,834 - +0.7 177,834 - -0.8 177,879 + -0.2 177,880 - -0.2 177,880 - +0.1 177,880 - -1.9 177,880 - -0.7 177,880 - +0.8 177,917 + +0.4 177,917 + -0.5 177,917 + -0.2 177,917 + -1.0 177,917 + +0.1 177,917 + -0.1 177,917 + +0.2 177,917 + -0.3 177,917 + -0.7 177,917 + +0.0 177,917 + +0.4 177,917 + -1.0 177,917 + -0.8 177,917 + -0.0 177,917 + -1.2 177,917 + +0.8 177,917 + +0.3 177,917 + -0.1 177,918 - -0.7 177,918 - -1.1 177,918 - -0.4 177,918 - +1.1 177,918 - +0.5 177,918 - -0.2 177,918 - -0.2 177,918 - -0.2 177,918 - -0.1 177,918 - -0.4 177,918 - +0.3 177,918 - +0.4 177,918 - +0.6 177,918 - +0.6 177,918 - -2.8 178,004 + -0.1 178,004 + -1.2 178,005 - -1.2 178,005 - +0.6 178,013 - +0.7 178,013 - -2.0 178,013 - -0.2 178,028 - +0.1 178,028 - +0.2 178,028 - -0.4 178,028 - +0.4 178,028 - +0.0 178,028 - +1.7 178,186 + OH686_00890 0.69 +0.3 178,186 + OH686_00890 0.69 -0.3 178,186 + OH686_00890 0.69 -0.0 178,186 + OH686_00890 0.69 -0.6 178,187 - OH686_00890 0.69 -1.1 178,187 - OH686_00890 0.69 -0.0 178,187 - OH686_00890 0.69 -0.6 178,187 - OH686_00890 0.69 +1.1 178,187 - OH686_00890 0.69 +0.7 178,314 + +0.1 178,405 + OH686_00895 0.17 -0.6 178,405 + OH686_00895 0.17 +1.2 178,405 + OH686_00895 0.17 -0.2 178,405 + OH686_00895 0.17 +0.2 178,405 + OH686_00895 0.17 -0.1 178,405 + OH686_00895 0.17 -0.2 178,405 + OH686_00895 0.17 -0.1 178,406 - OH686_00895 0.17 -0.3 178,406 - OH686_00895 0.17 -1.1 178,406 - OH686_00895 0.17 +0.3 178,414 + OH686_00895 0.17 -0.3 178,414 + OH686_00895 0.17 +0.6 178,414 + OH686_00895 0.17 -0.5 178,415 - OH686_00895 0.18 -0.3 178,415 - OH686_00895 0.18 -0.4 178,415 - OH686_00895 0.18 -0.7 178,450 + OH686_00895 0.21 -0.7 178,450 + OH686_00895 0.21 -2.0 178,451 - OH686_00895 0.21 +0.0 178,492 + OH686_00895 0.25 -0.8 178,492 + OH686_00895 0.25 +0.5 178,492 + OH686_00895 0.25 -1.4 178,492 + OH686_00895 0.25 +0.0 178,492 + OH686_00895 0.25 +0.4 178,603 + OH686_00895 0.37 +0.2 178,603 + OH686_00895 0.37 -2.0 178,603 + OH686_00895 0.37 -0.5 178,604 - OH686_00895 0.37 +0.6 178,790 + OH686_00895 0.56 +0.1 178,790 + OH686_00895 0.56 -0.3 178,790 + OH686_00895 0.56 -0.2 178,790 + OH686_00895 0.56 -0.7 178,790 + OH686_00895 0.56 -0.0 178,790 + OH686_00895 0.56 +0.9 178,791 - OH686_00895 0.56 -0.3 178,791 - OH686_00895 0.56 +0.6 178,791 - OH686_00895 0.56 +0.6 178,791 - OH686_00895 0.56 +0.9 178,791 - OH686_00895 0.56 -0.3 178,791 - OH686_00895 0.56 -1.0 178,791 - OH686_00895 0.56 -0.3 178,792 + OH686_00895 0.56 -0.0 178,792 + OH686_00895 0.56 +1.1 178,792 + OH686_00895 0.56 -0.9 178,792 + OH686_00895 0.56 +0.1 178,792 + OH686_00895 0.56 -0.8 178,792 + OH686_00895 0.56 -2.1 178,792 + OH686_00895 0.56 -0.3 178,792 + OH686_00895 0.56 -0.8 178,792 + OH686_00895 0.56 -0.2 178,792 + OH686_00895 0.56 -0.9 178,793 - OH686_00895 0.56 +0.1 178,793 - OH686_00895 0.56 +0.9 178,793 - OH686_00895 0.56 -0.0 178,793 - OH686_00895 0.56 +0.9 178,793 - OH686_00895 0.56 +1.4 178,793 - OH686_00895 0.56 -0.5 178,793 - OH686_00895 0.56 +0.9 178,793 - OH686_00895 0.56 +0.4 178,793 - OH686_00895 0.56 -0.0 178,793 - OH686_00895 0.56 -0.4 178,793 - OH686_00895 0.56 -0.6 178,897 + OH686_00895 0.66 +0.6 178,898 - OH686_00895 0.66 +1.1 178,987 + OH686_00895 0.75 +0.6 178,987 + OH686_00895 0.75 +0.2 178,987 + OH686_00895 0.75 +0.5 178,988 - OH686_00895 0.76 -0.1 178,988 - OH686_00895 0.76 +0.2 178,988 - OH686_00895 0.76 -0.5 178,988 - OH686_00895 0.76 +0.4 178,988 - OH686_00895 0.76 +0.8 178,988 - OH686_00895 0.76 -1.6 179,021 - OH686_00895 0.79 +0.0 179,059 + OH686_00895 0.83 +0.5 179,059 + OH686_00895 0.83 -0.9 179,060 - OH686_00895 0.83 +0.1 179,060 - OH686_00895 0.83 -0.7 179,060 - OH686_00895 0.83 +0.2 179,060 - OH686_00895 0.83 -0.0 179,068 + OH686_00895 0.84 -0.5 179,068 + OH686_00895 0.84 -1.7 179,068 + OH686_00895 0.84 +0.5 179,069 - OH686_00895 0.84 +1.0 179,069 - OH686_00895 0.84 -0.1 179,069 - OH686_00895 0.84 -0.7 179,069 - OH686_00895 0.84 +0.6 179,069 - OH686_00895 0.84 +0.9 179,069 - OH686_00895 0.84 +0.4 179,217 + +0.9 179,217 + +0.6 179,217 + +0.1 179,217 + +1.1 179,218 - +1.1 179,218 - +0.1 179,218 - -0.1 179,342 + +0.2 179,342 + -0.2 179,342 + +0.3 179,342 + +0.9 179,342 + -0.0 179,342 + +0.8 179,342 + -0.0 179,343 - +1.1 179,343 - +0.1 179,494 + +0.5 179,494 + -0.8 179,494 + -0.2 179,494 + -1.4 179,494 + -0.0 179,494 + -0.8 179,495 - -0.5 179,495 - +0.3 179,495 - -0.5 179,495 - -0.2 179,495 - +0.3 179,495 - +0.2 179,495 - -0.2 179,496 + -0.2 179,496 + -0.6 179,496 + -0.2 179,496 + +0.3 179,496 + +0.6 179,496 + -0.3 179,496 + +0.2 179,496 + +0.1 179,496 + -0.8 179,497 - -0.0 179,497 - -0.2 179,497 - +0.1 179,698 - OH686_00900 0.15 +1.7 179,698 - OH686_00900 0.15 +0.0 179,698 - OH686_00900 0.15 +1.1 179,734 + OH686_00900 0.18 +0.1 179,734 + OH686_00900 0.18 -0.4 179,734 + OH686_00900 0.18 +0.1 179,734 + OH686_00900 0.18 -0.4 179,735 - OH686_00900 0.18 +0.9 179,845 + OH686_00900 0.26 -0.7 179,984 + OH686_00900 0.36 +0.2 179,998 + OH686_00900 0.37 -1.4 179,998 + OH686_00900 0.37 +0.2 179,998 + OH686_00900 0.37 -0.1 179,999 - OH686_00900 0.37 +1.2 179,999 - OH686_00900 0.37 -2.7 179,999 - OH686_00900 0.37 -0.1 180,025 + OH686_00900 0.39 +1.6 180,026 - OH686_00900 0.39 -0.1 180,112 + OH686_00900 0.46 +0.1 180,112 + OH686_00900 0.46 -0.5 180,112 + OH686_00900 0.46 -1.0 180,113 - OH686_00900 0.46 +0.7 180,113 - OH686_00900 0.46 -0.3
Or see this region's nucleotide sequence