Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1029

Experiment: m.b. nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 10 mM
1,189,688	+				-0.8
1,189,689	-				+0.3
1,189,694	-				-0.6
1,189,725	+				+0.8
1,189,726	-				-0.9
1,189,726	-				+0.1
1,189,728	+				-2.1
1,189,729	-				-0.2
1,189,777	+				-0.5
1,189,794	-		Echvi_1028	0.12	-0.3
1,189,815	+		Echvi_1028	0.14	+0.4
1,189,815	+		Echvi_1028	0.14	+1.0
1,189,816	-		Echvi_1028	0.15	+1.5
1,189,827	+		Echvi_1028	0.16	+0.1
1,189,838	-		Echvi_1028	0.17	-1.6
1,189,838	-		Echvi_1028	0.17	+0.6
1,189,860	+		Echvi_1028	0.20	+0.2
1,189,860	+		Echvi_1028	0.20	+0.4
1,189,860	+		Echvi_1028	0.20	+1.5
1,189,861	-		Echvi_1028	0.20	+0.8
1,189,874	-		Echvi_1028	0.22	-0.3
1,189,879	-		Echvi_1028	0.23	+0.3
1,189,882	+		Echvi_1028	0.23	-0.1
1,189,917	+		Echvi_1028	0.28	-0.3
1,189,917	+		Echvi_1028	0.28	+0.7
1,189,918	-		Echvi_1028	0.28	-1.4
1,189,921	+		Echvi_1028	0.28	-2.6
1,189,922	-		Echvi_1028	0.28	-1.2
1,189,922	-		Echvi_1028	0.28	+0.0
1,189,922	-		Echvi_1028	0.28	+0.0
1,189,924	+		Echvi_1028	0.29	+1.9
1,189,924	+		Echvi_1028	0.29	-0.4
1,189,942	+		Echvi_1028	0.31	-0.1
1,189,947	+		Echvi_1028	0.32	+0.2
1,189,948	-		Echvi_1028	0.32	-1.6
1,189,948	-		Echvi_1028	0.32	-0.7
1,189,972	+		Echvi_1028	0.35	-0.8
1,189,972	+		Echvi_1028	0.35	+1.0
1,189,973	-		Echvi_1028	0.35	-0.1
1,189,973	-		Echvi_1028	0.35	+0.7
1,189,973	-		Echvi_1028	0.35	-0.6
1,189,978	-		Echvi_1028	0.36	-0.3
1,189,990	+		Echvi_1028	0.37	-0.8
1,189,990	+		Echvi_1028	0.37	-0.4
1,189,993	+		Echvi_1028	0.38	-2.0
1,189,993	+		Echvi_1028	0.38	-0.4
1,190,017	+		Echvi_1028	0.41	-0.8
1,190,018	-		Echvi_1028	0.41	-0.0
1,190,028	+		Echvi_1028	0.42	+1.9
1,190,028	+		Echvi_1028	0.42	+0.1
1,190,028	+		Echvi_1028	0.42	-1.4
1,190,028	+		Echvi_1028	0.42	-0.0
1,190,028	+		Echvi_1028	0.42	+1.2
1,190,029	-		Echvi_1028	0.42	-0.7
1,190,029	-		Echvi_1028	0.42	+0.8
1,190,029	-		Echvi_1028	0.42	+0.1
1,190,029	-		Echvi_1028	0.42	-0.2
1,190,029	-		Echvi_1028	0.42	+0.7
1,190,029	-		Echvi_1028	0.42	-1.0
1,190,037	-		Echvi_1028	0.43	+0.5
1,190,050	-		Echvi_1028	0.45	-1.6
1,190,052	+		Echvi_1028	0.45	+0.8
1,190,052	+		Echvi_1028	0.45	-0.2
1,190,053	-		Echvi_1028	0.45	+0.1
1,190,053	-		Echvi_1028	0.45	-0.1
1,190,053	-		Echvi_1028	0.45	-1.0
1,190,053	-		Echvi_1028	0.45	-0.0
1,190,073	+		Echvi_1028	0.48	-1.3
1,190,074	-		Echvi_1028	0.48	-0.5
1,190,106	+		Echvi_1028	0.52	+0.6
1,190,116	-		Echvi_1028	0.54	-1.4
1,190,127	+		Echvi_1028	0.55	-0.1
1,190,127	+		Echvi_1028	0.55	+0.1
1,190,149	+		Echvi_1028	0.58	+0.6
1,190,149	+		Echvi_1028	0.58	+0.6
1,190,150	-		Echvi_1028	0.58	-0.5
1,190,167	-		Echvi_1028	0.60	+0.3
1,190,189	+		Echvi_1028	0.63	+0.7
1,190,235	+		Echvi_1028	0.69	+1.3
1,190,250	+		Echvi_1028	0.71	-2.1
1,190,250	+		Echvi_1028	0.71	-0.0
1,190,250	+		Echvi_1028	0.71	-0.1
1,190,250	+		Echvi_1028	0.71	-1.9
1,190,250	+		Echvi_1028	0.71	-0.6
1,190,250	+		Echvi_1028	0.71	-0.1
1,190,251	-		Echvi_1028	0.71	+0.3
1,190,251	-		Echvi_1028	0.71	-1.4
1,190,251	-		Echvi_1028	0.71	-1.0
1,190,253	+		Echvi_1028	0.72	+0.0
1,190,253	+		Echvi_1028	0.72	+2.4
1,190,254	-		Echvi_1028	0.72	-1.1
1,190,254	-		Echvi_1028	0.72	+0.1
1,190,255	+		Echvi_1028	0.72	+0.9
1,190,255	+		Echvi_1028	0.72	+0.1
1,190,255	+		Echvi_1028	0.72	+1.7
1,190,255	+		Echvi_1028	0.72	+1.3
1,190,255	+		Echvi_1028	0.72	-0.5
1,190,255	+		Echvi_1028	0.72	+0.1
1,190,255	+		Echvi_1028	0.72	-1.1
1,190,256	-		Echvi_1028	0.72	-0.5
1,190,256	-		Echvi_1028	0.72	+0.2
1,190,256	-		Echvi_1028	0.72	-0.4
1,190,256	-		Echvi_1028	0.72	-1.2
1,190,256	-		Echvi_1028	0.72	-0.2
1,190,256	-		Echvi_1028	0.72	+0.5
1,190,256	-		Echvi_1028	0.72	-0.1
1,190,256	-		Echvi_1028	0.72	+0.5
1,190,256	-		Echvi_1028	0.72	+0.1
1,190,266	+		Echvi_1028	0.73	-0.9
1,190,286	+		Echvi_1028	0.76	-0.0
1,190,286	+		Echvi_1028	0.76	-0.3
1,190,287	-		Echvi_1028	0.76	-0.6
1,190,293	+		Echvi_1028	0.77	+0.7
1,190,293	+		Echvi_1028	0.77	+0.7
1,190,293	+		Echvi_1028	0.77	+1.5
1,190,294	-		Echvi_1028	0.77	+0.5
1,190,318	+		Echvi_1028	0.80	-0.2
1,190,318	+		Echvi_1028	0.80	+0.9
1,190,340	+		Echvi_1028	0.83	-0.0
1,190,341	-		Echvi_1028	0.83	+0.6
1,190,344	+		Echvi_1028	0.84	-0.3
1,190,361	+		Echvi_1028	0.86	+0.2
1,190,361	+		Echvi_1028	0.86	+0.3
1,190,365	+		Echvi_1028	0.86	+0.7
1,190,365	+		Echvi_1028	0.86	+0.0
1,190,365	+		Echvi_1028	0.86	-0.2
1,190,365	+		Echvi_1028	0.86	-1.3
1,190,365	+		Echvi_1028	0.86	+0.4
1,190,365	+		Echvi_1028	0.86	-0.7
1,190,365	+		Echvi_1028	0.86	-0.8
1,190,366	-		Echvi_1028	0.86	+0.5
1,190,366	-		Echvi_1028	0.86	-0.1
1,190,380	-		Echvi_1028	0.88	-0.2
1,190,380	-		Echvi_1028	0.88	+0.4
1,190,382	+		Echvi_1028	0.88	-0.5
1,190,406	+				-0.3
1,190,407	-				-0.8
1,190,411	+				-0.1
1,190,414	-				-0.4
1,190,418	+				+0.1
1,190,428	+				+0.5
1,190,428	+				+0.8
1,190,428	+				-0.3
1,190,431	+				+0.5
1,190,431	+				-1.2
1,190,431	+				-1.4
1,190,431	+				+0.2
1,190,431	+				+0.6
1,190,432	-				+1.0
1,190,432	-				+0.0
1,190,469	+				+0.1
1,190,472	+				-1.8
1,190,472	+				-0.4
1,190,472	+				-0.9
1,190,472	+				+1.4
1,190,473	-				+0.2
1,190,473	-				-0.8
1,190,482	+				+0.6
1,190,499	+				-0.4
1,190,525	+				+0.4
1,190,525	+				-0.0
1,190,535	+				-1.0
1,190,535	+				-0.5
1,190,535	+				-0.0
1,190,536	-				+0.2
1,190,539	+				+1.1
1,190,539	+				-0.3
1,190,540	-				-2.0
1,190,581	-				+0.9
1,190,630	+				-0.4
1,190,640	+				+1.2
1,190,640	+				+0.0
1,190,640	+				+0.3
1,190,756	+		Echvi_1029	0.21	-0.2
1,190,756	+		Echvi_1029	0.21	+0.7
1,190,756	+		Echvi_1029	0.21	-1.3
1,190,757	-		Echvi_1029	0.21	+0.5
1,190,757	-		Echvi_1029	0.21	-0.4
1,190,757	-		Echvi_1029	0.21	+0.4
1,190,757	-		Echvi_1029	0.21	+0.1
1,190,757	-		Echvi_1029	0.21	-0.5
1,190,757	-		Echvi_1029	0.21	-0.7
1,190,774	+		Echvi_1029	0.23	-0.6
1,190,774	+		Echvi_1029	0.23	+0.4
1,190,775	-		Echvi_1029	0.23	-0.9
1,190,777	-		Echvi_1029	0.24	+0.6
1,190,777	-		Echvi_1029	0.24	+0.5
1,190,787	-		Echvi_1029	0.25	+0.2
1,190,864	+		Echvi_1029	0.37	+0.8
1,190,864	+		Echvi_1029	0.37	+1.2
1,190,864	+		Echvi_1029	0.37	-2.7
1,190,865	-		Echvi_1029	0.37	+1.1
1,190,894	+		Echvi_1029	0.42	+2.1
1,190,894	+		Echvi_1029	0.42	-0.7
1,190,894	+		Echvi_1029	0.42	-0.4
1,190,894	+		Echvi_1029	0.42	-1.1
1,190,894	+		Echvi_1029	0.42	-0.5
1,190,894	+		Echvi_1029	0.42	+1.2
1,190,895	-		Echvi_1029	0.42	+0.6
1,190,895	-		Echvi_1029	0.42	+1.7
1,190,897	-		Echvi_1029	0.42	-1.2
1,190,900	+		Echvi_1029	0.42	+0.1
1,190,969	-		Echvi_1029	0.53	+0.8
1,190,977	+		Echvi_1029	0.54	+0.3
1,191,114	+		Echvi_1029	0.75	-0.3
1,191,129	-		Echvi_1029	0.77	-1.9
1,191,221	+				-0.1
1,191,222	-				-0.2
1,191,222	-				-0.3
1,191,222	-				+1.0
1,191,222	-				-0.1
1,191,234	-				-1.0
1,191,234	-				+0.8
1,191,270	+				-0.4
1,191,490	-		Echvi_1030	0.31	-1.8
1,191,490	-		Echvi_1030	0.31	-0.6
1,191,495	-		Echvi_1030	0.33	-1.9
1,191,515	+		Echvi_1030	0.37	+1.4
1,191,515	+		Echvi_1030	0.37	-1.4
1,191,532	+		Echvi_1030	0.41	-0.5
1,191,532	+		Echvi_1030	0.41	+0.0
1,191,533	-		Echvi_1030	0.42	-1.0
1,191,553	+		Echvi_1030	0.46	-0.6
1,191,575	+		Echvi_1030	0.52	+0.5
1,191,575	+		Echvi_1030	0.52	-0.2
1,191,575	+		Echvi_1030	0.52	-0.9
1,191,575	+		Echvi_1030	0.52	+1.3
1,191,575	+		Echvi_1030	0.52	-0.1
1,191,578	+		Echvi_1030	0.52	+0.6
1,191,578	+		Echvi_1030	0.52	-0.2
1,191,578	+		Echvi_1030	0.52	-0.6
1,191,605	+		Echvi_1030	0.59	-1.3
1,191,605	+		Echvi_1030	0.59	+0.2
1,191,606	-		Echvi_1030	0.59	+1.0
1,191,644	+		Echvi_1030	0.68	+0.9
1,191,644	+		Echvi_1030	0.68	+0.3
1,191,644	+		Echvi_1030	0.68	+0.7
1,191,645	-		Echvi_1030	0.68	+0.2
1,191,657	+		Echvi_1030	0.71	+0.3
1,191,749	+				-1.1
1,191,749	+				-0.3
1,191,782	+				+0.3
1,191,782	+				+0.6
1,191,783	-				+1.3
1,191,783	-				+0.7
1,191,812	+				-0.9
1,191,815	-				+0.2
1,191,815	-				+0.8
1,191,815	-				+0.6
1,191,818	+				+0.2
1,191,818	+				+0.1
1,191,819	-				-0.6
1,191,832	-				+1.1
1,191,834	+				+1.5
1,191,883	+				-0.8
1,191,907	+				+0.2
1,191,920	-				-0.9
1,191,920	-				+1.1
1,191,921	+				+1.6
1,191,942	+				+0.9
1,191,942	+				+0.5
1,191,942	+				+1.3
1,191,942	+				-0.1
1,191,943	-				-0.1
1,191,943	-				-0.5
1,191,943	-				-0.4
1,191,949	+				+0.0
1,191,950	-				+0.3
1,192,021	-				-1.0
1,192,021	-				-0.4
1,192,021	-				+0.2
1,192,021	-				+0.3
1,192,024	-				+0.5
1,192,024	-				-0.1
1,192,082	+				-1.0
1,192,130	+				+0.7
1,192,130	+				-0.5
1,192,130	+				+0.2
1,192,131	-				+0.2
1,192,134	+				+0.2
1,192,134	+				+0.4
1,192,135	-				+0.4
1,192,135	-				-2.5
1,192,137	+				+0.0
1,192,149	+				-0.1
1,192,149	+				-1.2
1,192,149	+				+1.0
1,192,149	+				+0.6
1,192,150	-				-0.3
1,192,178	+				+0.2
1,192,179	-				-1.1
1,192,198	+				-0.7
1,192,198	+				+0.4
1,192,198	+				-1.1
1,192,199	-				+0.4
1,192,252	+				-0.3
1,192,265	-				-0.6
1,192,265	-				-2.0