Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4506 and EX28DRAFT_4507 are separated by 42 nucleotides EX28DRAFT_4507 and EX28DRAFT_4508 are separated by 39 nucleotides EX28DRAFT_4508 and EX28DRAFT_4509 are separated by 0 nucleotides EX28DRAFT_4509 and EX28DRAFT_4510 are separated by 9 nucleotides
EX28DRAFT_4506: EX28DRAFT_4506 - UbiD family decarboxylase, at 71,752 to 73,245
_4506
EX28DRAFT_4507: EX28DRAFT_4507 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases, at 73,288 to 73,989
_4507
EX28DRAFT_4508: EX28DRAFT_4508 - hypothetical protein, at 74,029 to 74,172
_4508
EX28DRAFT_4509: EX28DRAFT_4509 - fatty oxidation complex, beta subunit FadA, at 74,173 to 75,336
_4509
EX28DRAFT_4510: EX28DRAFT_4510 - fatty oxidation complex, alpha subunit FadB, at 75,346 to 77,662
_4510
Position (kb) 74
75
76 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 73.237 kb on - strand at 73.255 kb on + strand at 73.264 kb on + strand at 73.264 kb on + strand at 73.264 kb on + strand at 73.264 kb on + strand at 73.265 kb on - strand at 73.340 kb on + strand at 73.340 kb on + strand at 73.340 kb on + strand at 73.340 kb on + strand at 73.340 kb on + strand at 73.340 kb on + strand at 73.758 kb on - strand, within EX28DRAFT_4507 at 73.883 kb on - strand, within EX28DRAFT_4507 at 73.883 kb on - strand, within EX28DRAFT_4507 at 73.883 kb on - strand, within EX28DRAFT_4507 at 73.988 kb on - strand at 74.030 kb on + strand at 74.030 kb on + strand at 74.103 kb on + strand, within EX28DRAFT_4508 at 74.104 kb on - strand, within EX28DRAFT_4508 at 74.104 kb on - strand, within EX28DRAFT_4508 at 74.174 kb on + strand at 74.175 kb on - strand at 74.284 kb on - strand at 74.379 kb on + strand, within EX28DRAFT_4509 at 74.536 kb on + strand, within EX28DRAFT_4509 at 74.629 kb on - strand, within EX28DRAFT_4509 at 74.629 kb on - strand, within EX28DRAFT_4509 at 74.689 kb on + strand, within EX28DRAFT_4509 at 74.689 kb on + strand, within EX28DRAFT_4509 at 74.690 kb on - strand, within EX28DRAFT_4509 at 74.737 kb on + strand, within EX28DRAFT_4509 at 74.781 kb on + strand, within EX28DRAFT_4509 at 74.781 kb on + strand, within EX28DRAFT_4509 at 74.781 kb on + strand, within EX28DRAFT_4509 at 74.782 kb on - strand, within EX28DRAFT_4509 at 75.177 kb on - strand, within EX28DRAFT_4509 at 75.177 kb on - strand, within EX28DRAFT_4509 at 75.181 kb on - strand, within EX28DRAFT_4509 at 75.399 kb on - strand at 75.446 kb on + strand at 75.467 kb on + strand at 75.556 kb on + strand at 75.834 kb on - strand, within EX28DRAFT_4510 at 75.921 kb on - strand, within EX28DRAFT_4510 at 75.958 kb on + strand, within EX28DRAFT_4510 at 75.959 kb on - strand, within EX28DRAFT_4510 at 75.959 kb on - strand, within EX28DRAFT_4510 at 76.111 kb on - strand, within EX28DRAFT_4510
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 73,237 - -0.4 73,255 + +0.4 73,264 + +0.5 73,264 + -1.9 73,264 + -0.2 73,264 + +0.5 73,265 - -1.1 73,340 + -0.0 73,340 + -2.3 73,340 + -6.3 73,340 + -4.8 73,340 + -5.4 73,340 + -2.2 73,758 - EX28DRAFT_4507 0.67 -1.4 73,883 - EX28DRAFT_4507 0.85 -4.6 73,883 - EX28DRAFT_4507 0.85 -1.0 73,883 - EX28DRAFT_4507 0.85 -1.6 73,988 - +0.6 74,030 + -0.2 74,030 + -0.4 74,103 + EX28DRAFT_4508 0.51 +0.2 74,104 - EX28DRAFT_4508 0.52 +1.9 74,104 - EX28DRAFT_4508 0.52 +0.2 74,174 + -0.2 74,175 - +0.9 74,284 - -0.1 74,379 + EX28DRAFT_4509 0.18 +0.5 74,536 + EX28DRAFT_4509 0.31 +1.2 74,629 - EX28DRAFT_4509 0.39 +0.2 74,629 - EX28DRAFT_4509 0.39 +0.4 74,689 + EX28DRAFT_4509 0.44 +0.5 74,689 + EX28DRAFT_4509 0.44 +2.1 74,690 - EX28DRAFT_4509 0.44 +0.4 74,737 + EX28DRAFT_4509 0.48 -1.1 74,781 + EX28DRAFT_4509 0.52 -0.5 74,781 + EX28DRAFT_4509 0.52 +0.3 74,781 + EX28DRAFT_4509 0.52 +0.2 74,782 - EX28DRAFT_4509 0.52 +0.8 75,177 - EX28DRAFT_4509 0.86 +0.4 75,177 - EX28DRAFT_4509 0.86 -2.7 75,181 - EX28DRAFT_4509 0.87 +2.1 75,399 - -0.9 75,446 + +0.8 75,467 + -0.5 75,556 + +0.1 75,834 - EX28DRAFT_4510 0.21 +0.3 75,921 - EX28DRAFT_4510 0.25 -0.0 75,958 + EX28DRAFT_4510 0.26 -0.3 75,959 - EX28DRAFT_4510 0.26 +0.5 75,959 - EX28DRAFT_4510 0.26 +0.4 76,111 - EX28DRAFT_4510 0.33 +0.7
Or see this region's nucleotide sequence