Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4404 and EX28DRAFT_4405 are separated by 9 nucleotides EX28DRAFT_4405 and EX28DRAFT_4406 are separated by 94 nucleotides
EX28DRAFT_4404: EX28DRAFT_4404 - ATP-dependent protease HslVU, ATPase subunit, at 66,203 to 67,537
_4404
EX28DRAFT_4405: EX28DRAFT_4405 - ATP-dependent protease HslVU, peptidase subunit, at 67,547 to 68,077
_4405
EX28DRAFT_4406: EX28DRAFT_4406 - cell division protein FtsN, at 68,172 to 69,065
_4406
Position (kb) 67
68
69 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 66.874 kb on + strand, within EX28DRAFT_4404 at 66.875 kb on - strand, within EX28DRAFT_4404 at 67.266 kb on + strand, within EX28DRAFT_4404 at 67.267 kb on - strand, within EX28DRAFT_4404 at 67.267 kb on - strand, within EX28DRAFT_4404 at 67.267 kb on - strand, within EX28DRAFT_4404 at 67.426 kb on + strand at 67.548 kb on + strand at 67.549 kb on - strand at 67.593 kb on + strand at 67.593 kb on + strand at 67.593 kb on + strand at 67.593 kb on + strand at 67.594 kb on - strand at 68.003 kb on - strand, within EX28DRAFT_4405 at 68.063 kb on + strand at 68.063 kb on + strand at 68.063 kb on + strand at 68.064 kb on - strand at 68.064 kb on - strand at 68.064 kb on - strand at 68.064 kb on - strand at 68.066 kb on + strand at 68.066 kb on + strand at 68.066 kb on + strand at 68.067 kb on - strand at 68.142 kb on - strand at 68.148 kb on + strand at 68.149 kb on - strand at 68.149 kb on - strand at 68.300 kb on + strand, within EX28DRAFT_4406 at 68.300 kb on + strand, within EX28DRAFT_4406 at 68.301 kb on - strand, within EX28DRAFT_4406 at 68.301 kb on - strand, within EX28DRAFT_4406 at 68.486 kb on + strand, within EX28DRAFT_4406 at 68.600 kb on - strand, within EX28DRAFT_4406
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 66,874 + EX28DRAFT_4404 0.50 -1.3 66,875 - EX28DRAFT_4404 0.50 -0.2 67,266 + EX28DRAFT_4404 0.80 +0.5 67,267 - EX28DRAFT_4404 0.80 -2.0 67,267 - EX28DRAFT_4404 0.80 -1.6 67,267 - EX28DRAFT_4404 0.80 -0.5 67,426 + -0.7 67,548 + -2.8 67,549 - +0.2 67,593 + +0.2 67,593 + -3.0 67,593 + +0.5 67,593 + +0.8 67,594 - -0.1 68,003 - EX28DRAFT_4405 0.86 -2.0 68,063 + -2.1 68,063 + +0.0 68,063 + +0.5 68,064 - +0.1 68,064 - -0.4 68,064 - -0.7 68,064 - +0.2 68,066 + +0.1 68,066 + +0.2 68,066 + -0.9 68,067 - -0.1 68,142 - -0.2 68,148 + -2.5 68,149 - +0.6 68,149 - -0.2 68,300 + EX28DRAFT_4406 0.14 -1.1 68,300 + EX28DRAFT_4406 0.14 -0.9 68,301 - EX28DRAFT_4406 0.14 -0.2 68,301 - EX28DRAFT_4406 0.14 -4.2 68,486 + EX28DRAFT_4406 0.35 -0.6 68,600 - EX28DRAFT_4406 0.48 -0.3
Or see this region's nucleotide sequence