Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_4227
Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MS_media with arsenate 5 mM |
---|---|---|---|---|---|
remove | |||||
31,910 | - | EX28DRAFT_4225 | 0.59 | -1.6 | |
31,910 | - | EX28DRAFT_4225 | 0.59 | -3.3 | |
32,048 | + | EX28DRAFT_4225 | 0.78 | +0.5 | |
32,187 | + | +1.8 | |||
32,187 | + | -0.0 | |||
32,187 | + | +0.5 | |||
32,187 | + | +0.4 | |||
32,188 | - | +0.7 | |||
32,188 | - | -0.4 | |||
32,188 | - | -0.3 | |||
32,232 | + | +0.6 | |||
32,233 | - | +1.2 | |||
32,395 | - | +0.2 | |||
32,429 | + | +0.1 | |||
32,605 | + | +0.4 | |||
32,605 | + | +0.1 | |||
32,606 | - | +0.7 | |||
32,623 | - | +0.7 | |||
32,758 | + | EX28DRAFT_4226 | 0.14 | +0.7 | |
32,758 | + | EX28DRAFT_4226 | 0.14 | -0.6 | |
32,818 | + | EX28DRAFT_4226 | 0.16 | -0.3 | |
32,818 | + | EX28DRAFT_4226 | 0.16 | +0.3 | |
32,818 | + | EX28DRAFT_4226 | 0.16 | -0.0 | |
32,819 | - | EX28DRAFT_4226 | 0.16 | +0.2 | |
32,819 | - | EX28DRAFT_4226 | 0.16 | +0.1 | |
32,819 | - | EX28DRAFT_4226 | 0.16 | +0.2 | |
32,957 | + | +0.5 | |||
32,958 | - | +0.7 | |||
32,962 | - | -0.1 | |||
32,962 | - | -0.2 | |||
32,989 | + | -0.0 | |||
33,168 | + | -1.1 | |||
33,319 | + | +0.0 | |||
33,320 | - | +0.3 | |||
33,462 | - | +0.0 | |||
33,533 | - | +0.5 | |||
33,661 | + | -0.7 | |||
33,661 | + | -0.4 | |||
33,753 | + | +0.3 | |||
33,753 | + | -0.5 | |||
33,755 | - | -0.4 |
Or see this region's nucleotide sequence