Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3923 and EX28DRAFT_3924 are separated by 99 nucleotides EX28DRAFT_3924 and EX28DRAFT_3925 are separated by 102 nucleotides EX28DRAFT_3925 and EX28DRAFT_3926 are separated by 145 nucleotides
EX28DRAFT_3923: EX28DRAFT_3923 - Predicted transcriptional regulators, at 132,885 to 133,610
_3923
EX28DRAFT_3924: EX28DRAFT_3924 - hydroxyisourate hydrolase, at 133,710 to 134,120
_3924
EX28DRAFT_3925: EX28DRAFT_3925 - Uncharacterized conserved protein, at 134,223 to 135,182
_3925
EX28DRAFT_3926: EX28DRAFT_3926 - Predicted ATPase, at 135,328 to 136,416
_3926
Position (kb) 134
135
136 Strain fitness (log2 ratio) -1
0
1
2
3 at 133.326 kb on + strand, within EX28DRAFT_3923 at 133.327 kb on - strand, within EX28DRAFT_3923 at 133.373 kb on + strand, within EX28DRAFT_3923 at 133.374 kb on - strand, within EX28DRAFT_3923 at 133.374 kb on - strand, within EX28DRAFT_3923 at 133.511 kb on + strand, within EX28DRAFT_3923 at 133.511 kb on + strand, within EX28DRAFT_3923 at 133.512 kb on - strand, within EX28DRAFT_3923 at 133.690 kb on + strand at 133.691 kb on - strand at 133.960 kb on - strand, within EX28DRAFT_3924 at 133.961 kb on + strand, within EX28DRAFT_3924 at 133.961 kb on + strand, within EX28DRAFT_3924 at 133.961 kb on + strand, within EX28DRAFT_3924 at 133.987 kb on - strand, within EX28DRAFT_3924 at 134.118 kb on + strand at 134.121 kb on + strand at 134.202 kb on + strand at 134.203 kb on - strand at 134.203 kb on - strand at 134.301 kb on - strand at 134.396 kb on - strand, within EX28DRAFT_3925 at 134.396 kb on - strand, within EX28DRAFT_3925 at 134.493 kb on + strand, within EX28DRAFT_3925 at 134.748 kb on - strand, within EX28DRAFT_3925 at 134.794 kb on - strand, within EX28DRAFT_3925 at 134.795 kb on + strand, within EX28DRAFT_3925 at 134.970 kb on - strand, within EX28DRAFT_3925 at 134.979 kb on + strand, within EX28DRAFT_3925 at 135.059 kb on + strand, within EX28DRAFT_3925 at 135.091 kb on - strand at 135.114 kb on + strand at 135.132 kb on + strand at 135.132 kb on + strand at 135.295 kb on + strand at 135.439 kb on + strand, within EX28DRAFT_3926 at 135.439 kb on + strand, within EX28DRAFT_3926 at 135.439 kb on + strand, within EX28DRAFT_3926 at 135.440 kb on - strand, within EX28DRAFT_3926 at 135.589 kb on + strand, within EX28DRAFT_3926 at 135.596 kb on - strand, within EX28DRAFT_3926 at 135.602 kb on + strand, within EX28DRAFT_3926 at 135.602 kb on + strand, within EX28DRAFT_3926 at 135.603 kb on - strand, within EX28DRAFT_3926 at 135.603 kb on - strand, within EX28DRAFT_3926 at 135.726 kb on + strand, within EX28DRAFT_3926 at 135.727 kb on - strand, within EX28DRAFT_3926 at 135.791 kb on - strand, within EX28DRAFT_3926 at 135.806 kb on + strand, within EX28DRAFT_3926 at 135.871 kb on - strand, within EX28DRAFT_3926 at 135.883 kb on + strand, within EX28DRAFT_3926
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 133,326 + EX28DRAFT_3923 0.61 -1.0 133,327 - EX28DRAFT_3923 0.61 +0.3 133,373 + EX28DRAFT_3923 0.67 +0.2 133,374 - EX28DRAFT_3923 0.67 +1.6 133,374 - EX28DRAFT_3923 0.67 +0.8 133,511 + EX28DRAFT_3923 0.86 +0.7 133,511 + EX28DRAFT_3923 0.86 +2.0 133,512 - EX28DRAFT_3923 0.86 +0.3 133,690 + -0.0 133,691 - -0.6 133,960 - EX28DRAFT_3924 0.61 +0.2 133,961 + EX28DRAFT_3924 0.61 +0.6 133,961 + EX28DRAFT_3924 0.61 +0.6 133,961 + EX28DRAFT_3924 0.61 +0.1 133,987 - EX28DRAFT_3924 0.67 -0.1 134,118 + +3.2 134,121 + +0.6 134,202 + +0.7 134,203 - +0.3 134,203 - +0.6 134,301 - +0.7 134,396 - EX28DRAFT_3925 0.18 +0.2 134,396 - EX28DRAFT_3925 0.18 +0.0 134,493 + EX28DRAFT_3925 0.28 +0.8 134,748 - EX28DRAFT_3925 0.55 +0.2 134,794 - EX28DRAFT_3925 0.59 +0.2 134,795 + EX28DRAFT_3925 0.60 +0.1 134,970 - EX28DRAFT_3925 0.78 +0.1 134,979 + EX28DRAFT_3925 0.79 -0.8 135,059 + EX28DRAFT_3925 0.87 +1.1 135,091 - +0.3 135,114 + +0.1 135,132 + -0.3 135,132 + +1.5 135,295 + -0.7 135,439 + EX28DRAFT_3926 0.10 +0.0 135,439 + EX28DRAFT_3926 0.10 -0.4 135,439 + EX28DRAFT_3926 0.10 +1.0 135,440 - EX28DRAFT_3926 0.10 -0.1 135,589 + EX28DRAFT_3926 0.24 +0.4 135,596 - EX28DRAFT_3926 0.25 -0.2 135,602 + EX28DRAFT_3926 0.25 +0.4 135,602 + EX28DRAFT_3926 0.25 -0.2 135,603 - EX28DRAFT_3926 0.25 -0.6 135,603 - EX28DRAFT_3926 0.25 +0.5 135,726 + EX28DRAFT_3926 0.37 -0.5 135,727 - EX28DRAFT_3926 0.37 -0.2 135,791 - EX28DRAFT_3926 0.43 +0.2 135,806 + EX28DRAFT_3926 0.44 +0.9 135,871 - EX28DRAFT_3926 0.50 -0.9 135,883 + EX28DRAFT_3926 0.51 +1.6
Or see this region's nucleotide sequence