Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_3771

Experiment: MS_media with arsenate 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_3770 and EX28DRAFT_3771 overlap by 4 nucleotidesEX28DRAFT_3771 and EX28DRAFT_3772 are separated by 38 nucleotides EX28DRAFT_3770: EX28DRAFT_3770 - lipid-A-disaccharide synthase (EC 2.4.1.182), at 450,813 to 451,961 _3770 EX28DRAFT_3771: EX28DRAFT_3771 - RNase HII (EC 3.1.26.4), at 451,958 to 452,554 _3771 EX28DRAFT_3772: EX28DRAFT_3772 - DNA-directed DNA polymerase III (polc), at 452,593 to 456,075 _3772 Position (kb) 451 452 453Strain fitness (log2 ratio) -2 -1 0 1at 452.267 kb on + strand, within EX28DRAFT_3771at 452.368 kb on + strand, within EX28DRAFT_3771at 452.417 kb on + strand, within EX28DRAFT_3771at 452.417 kb on + strand, within EX28DRAFT_3771at 452.417 kb on + strand, within EX28DRAFT_3771at 452.426 kb on + strand, within EX28DRAFT_3771at 452.572 kb on + strandat 452.572 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM
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452,267 + EX28DRAFT_3771 0.52 -0.8
452,368 + EX28DRAFT_3771 0.69 +0.6
452,417 + EX28DRAFT_3771 0.77 -0.5
452,417 + EX28DRAFT_3771 0.77 -1.8
452,417 + EX28DRAFT_3771 0.77 +0.3
452,426 + EX28DRAFT_3771 0.78 -2.4
452,572 + +0.2
452,572 + +0.4

Or see this region's nucleotide sequence