Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3136 and EX28DRAFT_3137 are separated by 147 nucleotides EX28DRAFT_3137 and EX28DRAFT_3138 overlap by 4 nucleotides EX28DRAFT_3138 and EX28DRAFT_3139 are separated by 336 nucleotides
EX28DRAFT_3136: EX28DRAFT_3136 - Siderophore-interacting protein, at 435,907 to 436,671
_3136
EX28DRAFT_3137: EX28DRAFT_3137 - Predicted transcriptional regulators, at 436,819 to 437,313
_3137
EX28DRAFT_3138: EX28DRAFT_3138 - Methyl-accepting chemotaxis protein, at 437,310 to 438,869
_3138
EX28DRAFT_3139: EX28DRAFT_3139 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor, at 439,206 to 440,726
_3139
Position (kb) 437
438
439 Strain fitness (log2 ratio) -1
0
1 at 436.400 kb on + strand, within EX28DRAFT_3136 at 436.412 kb on + strand, within EX28DRAFT_3136 at 436.412 kb on + strand, within EX28DRAFT_3136 at 436.412 kb on + strand, within EX28DRAFT_3136 at 436.432 kb on + strand, within EX28DRAFT_3136 at 436.432 kb on + strand, within EX28DRAFT_3136 at 436.515 kb on + strand, within EX28DRAFT_3136 at 436.638 kb on + strand at 436.662 kb on + strand at 436.663 kb on - strand at 436.663 kb on - strand at 436.695 kb on - strand at 436.702 kb on - strand at 437.213 kb on + strand, within EX28DRAFT_3137 at 437.474 kb on + strand, within EX28DRAFT_3138 at 437.474 kb on + strand, within EX28DRAFT_3138 at 437.475 kb on - strand, within EX28DRAFT_3138 at 437.475 kb on - strand, within EX28DRAFT_3138 at 438.275 kb on + strand, within EX28DRAFT_3138 at 438.309 kb on - strand, within EX28DRAFT_3138 at 438.392 kb on + strand, within EX28DRAFT_3138 at 438.497 kb on - strand, within EX28DRAFT_3138 at 438.631 kb on + strand, within EX28DRAFT_3138 at 438.632 kb on - strand, within EX28DRAFT_3138 at 438.632 kb on - strand, within EX28DRAFT_3138 at 438.632 kb on - strand, within EX28DRAFT_3138 at 438.735 kb on - strand at 438.861 kb on + strand at 438.979 kb on - strand at 439.079 kb on + strand at 439.200 kb on - strand at 439.424 kb on + strand, within EX28DRAFT_3139 at 439.424 kb on + strand, within EX28DRAFT_3139 at 439.473 kb on + strand, within EX28DRAFT_3139 at 439.473 kb on + strand, within EX28DRAFT_3139 at 439.473 kb on + strand, within EX28DRAFT_3139 at 439.474 kb on - strand, within EX28DRAFT_3139 at 439.503 kb on - strand, within EX28DRAFT_3139 at 439.628 kb on + strand, within EX28DRAFT_3139
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 436,400 + EX28DRAFT_3136 0.64 +0.5 436,412 + EX28DRAFT_3136 0.66 +0.4 436,412 + EX28DRAFT_3136 0.66 +0.3 436,412 + EX28DRAFT_3136 0.66 +0.5 436,432 + EX28DRAFT_3136 0.69 -0.7 436,432 + EX28DRAFT_3136 0.69 -0.2 436,515 + EX28DRAFT_3136 0.79 +0.9 436,638 + -0.2 436,662 + -0.6 436,663 - +0.7 436,663 - -0.1 436,695 - +1.7 436,702 - -0.0 437,213 + EX28DRAFT_3137 0.80 -1.6 437,474 + EX28DRAFT_3138 0.11 -0.1 437,474 + EX28DRAFT_3138 0.11 -0.1 437,475 - EX28DRAFT_3138 0.11 -0.1 437,475 - EX28DRAFT_3138 0.11 -0.2 438,275 + EX28DRAFT_3138 0.62 +0.5 438,309 - EX28DRAFT_3138 0.64 -1.3 438,392 + EX28DRAFT_3138 0.69 -0.4 438,497 - EX28DRAFT_3138 0.76 -0.3 438,631 + EX28DRAFT_3138 0.85 -0.0 438,632 - EX28DRAFT_3138 0.85 -0.2 438,632 - EX28DRAFT_3138 0.85 -0.3 438,632 - EX28DRAFT_3138 0.85 +0.7 438,735 - +0.6 438,861 + -0.5 438,979 - +1.0 439,079 + +0.2 439,200 - -0.1 439,424 + EX28DRAFT_3139 0.14 -0.2 439,424 + EX28DRAFT_3139 0.14 +0.2 439,473 + EX28DRAFT_3139 0.18 +0.3 439,473 + EX28DRAFT_3139 0.18 +0.3 439,473 + EX28DRAFT_3139 0.18 +0.4 439,474 - EX28DRAFT_3139 0.18 +0.2 439,503 - EX28DRAFT_3139 0.20 +0.7 439,628 + EX28DRAFT_3139 0.28 +0.0
Or see this region's nucleotide sequence