Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2519
Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MS_media with arsenate 5 mM |
---|---|---|---|---|---|
remove | |||||
2,548,415 | - | EX28DRAFT_2518 | 0.46 | -1.1 | |
2,548,539 | + | EX28DRAFT_2518 | 0.56 | +0.9 | |
2,548,539 | + | EX28DRAFT_2518 | 0.56 | -1.9 | |
2,548,621 | + | EX28DRAFT_2518 | 0.62 | -0.0 | |
2,548,621 | + | EX28DRAFT_2518 | 0.62 | -0.6 | |
2,548,674 | - | EX28DRAFT_2518 | 0.66 | -0.5 | |
2,548,712 | + | EX28DRAFT_2518 | 0.69 | +0.9 | |
2,548,747 | + | EX28DRAFT_2518 | 0.72 | -0.8 | |
2,548,753 | + | EX28DRAFT_2518 | 0.72 | -0.4 | |
2,549,101 | - | -0.3 | |||
2,549,101 | - | +0.2 | |||
2,549,323 | + | EX28DRAFT_2519 | 0.53 | -0.2 | |
2,549,324 | - | EX28DRAFT_2519 | 0.53 | +1.5 | |
2,549,462 | + | -0.6 | |||
2,549,462 | + | -0.7 | |||
2,549,463 | - | +0.7 | |||
2,549,482 | + | -0.2 | |||
2,549,483 | - | -0.3 | |||
2,549,483 | - | -0.6 | |||
2,549,533 | - | -3.0 | |||
2,549,771 | + | +0.0 | |||
2,550,084 | + | EX28DRAFT_2520 | 0.21 | +0.4 | |
2,550,085 | - | EX28DRAFT_2520 | 0.21 | -1.7 | |
2,550,349 | - | EX28DRAFT_2520 | 0.36 | -2.4 |
Or see this region's nucleotide sequence