Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2487 and EX28DRAFT_2489 are separated by 88 nucleotides EX28DRAFT_2489 and EX28DRAFT_2490 are separated by 150 nucleotides EX28DRAFT_2490 and EX28DRAFT_2491 are separated by 50 nucleotides
EX28DRAFT_2487: EX28DRAFT_2487 - DNA polymerase III, subunit gamma and tau, at 2,517,570 to 2,519,498
_2487
EX28DRAFT_2489: EX28DRAFT_2489 - adenine phosphoribosyltransferase (EC 2.4.2.7), at 2,519,587 to 2,520,138
_2489
EX28DRAFT_2490: EX28DRAFT_2490 - Uncharacterized protein conserved in bacteria, at 2,520,289 to 2,520,666
_2490
EX28DRAFT_2491: EX28DRAFT_2491 - restart primosome assembly protein PriC, at 2,520,717 to 2,521,244
_2491
Position (kb)
2519
2520
2521 Strain fitness (log2 ratio)
-1
0
1 at 2519.615 kb on + strand at 2519.841 kb on - strand, within EX28DRAFT_2489 at 2519.959 kb on + strand, within EX28DRAFT_2489 at 2519.959 kb on + strand, within EX28DRAFT_2489 at 2519.959 kb on + strand, within EX28DRAFT_2489 at 2519.959 kb on + strand, within EX28DRAFT_2489 at 2519.960 kb on - strand, within EX28DRAFT_2489 at 2519.983 kb on - strand, within EX28DRAFT_2489 at 2520.340 kb on - strand, within EX28DRAFT_2490 at 2520.409 kb on - strand, within EX28DRAFT_2490 at 2520.513 kb on - strand, within EX28DRAFT_2490 at 2520.654 kb on + strand at 2520.700 kb on + strand at 2520.779 kb on + strand, within EX28DRAFT_2491 at 2520.861 kb on + strand, within EX28DRAFT_2491 at 2520.861 kb on + strand, within EX28DRAFT_2491
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,519,615 + -0.5 2,519,841 - EX28DRAFT_2489 0.46 +0.4 2,519,959 + EX28DRAFT_2489 0.67 +0.1 2,519,959 + EX28DRAFT_2489 0.67 -0.1 2,519,959 + EX28DRAFT_2489 0.67 -1.2 2,519,959 + EX28DRAFT_2489 0.67 +0.0 2,519,960 - EX28DRAFT_2489 0.68 -1.5 2,519,983 - EX28DRAFT_2489 0.72 -1.3 2,520,340 - EX28DRAFT_2490 0.13 +0.2 2,520,409 - EX28DRAFT_2490 0.32 -0.1 2,520,513 - EX28DRAFT_2490 0.59 -1.7 2,520,654 + -0.8 2,520,700 + +0.3 2,520,779 + EX28DRAFT_2491 0.12 +0.6 2,520,861 + EX28DRAFT_2491 0.27 +0.4 2,520,861 + EX28DRAFT_2491 0.27 -0.8
Or see this region's nucleotide sequence