Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2484 and EX28DRAFT_2485 are separated by 110 nucleotides EX28DRAFT_2485 and EX28DRAFT_2486 overlap by 1 nucleotides EX28DRAFT_2486 and EX28DRAFT_2487 are separated by 54 nucleotides
EX28DRAFT_2484: EX28DRAFT_2484 - Molecular chaperone, HSP90 family, at 2,514,593 to 2,516,467
_2484
EX28DRAFT_2485: EX28DRAFT_2485 - DNA replication and repair protein RecR, at 2,516,578 to 2,517,183
_2485
EX28DRAFT_2486: EX28DRAFT_2486 - DNA-binding protein, YbaB/EbfC family, at 2,517,183 to 2,517,515
_2486
EX28DRAFT_2487: EX28DRAFT_2487 - DNA polymerase III, subunit gamma and tau, at 2,517,570 to 2,519,498
_2487
EX28DRAFT_2488: EX28DRAFT_2488 - RNA, at 2,518,176 to 2,518,240
_2488
Position (kb)
2516
2517
2518 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2515.633 kb on - strand, within EX28DRAFT_2484 at 2515.647 kb on + strand, within EX28DRAFT_2484 at 2515.658 kb on - strand, within EX28DRAFT_2484 at 2515.745 kb on - strand, within EX28DRAFT_2484 at 2515.787 kb on + strand, within EX28DRAFT_2484 at 2515.788 kb on - strand, within EX28DRAFT_2484 at 2515.984 kb on - strand, within EX28DRAFT_2484 at 2516.086 kb on - strand, within EX28DRAFT_2484 at 2516.470 kb on - strand at 2516.494 kb on - strand at 2516.505 kb on - strand at 2516.715 kb on + strand, within EX28DRAFT_2485 at 2516.717 kb on + strand, within EX28DRAFT_2485 at 2516.717 kb on + strand, within EX28DRAFT_2485 at 2516.718 kb on - strand, within EX28DRAFT_2485 at 2516.718 kb on - strand, within EX28DRAFT_2485 at 2516.906 kb on + strand, within EX28DRAFT_2485 at 2516.906 kb on + strand, within EX28DRAFT_2485 at 2516.907 kb on - strand, within EX28DRAFT_2485 at 2516.907 kb on - strand, within EX28DRAFT_2485 at 2517.516 kb on - strand at 2517.516 kb on - strand at 2517.554 kb on + strand at 2517.555 kb on - strand at 2517.555 kb on - strand at 2517.555 kb on - strand at 2517.555 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,515,633 - EX28DRAFT_2484 0.55 -0.1 2,515,647 + EX28DRAFT_2484 0.56 -0.1 2,515,658 - EX28DRAFT_2484 0.57 -0.2 2,515,745 - EX28DRAFT_2484 0.61 -1.0 2,515,787 + EX28DRAFT_2484 0.64 -1.4 2,515,788 - EX28DRAFT_2484 0.64 -1.6 2,515,984 - EX28DRAFT_2484 0.74 +1.1 2,516,086 - EX28DRAFT_2484 0.80 -0.5 2,516,470 - -1.1 2,516,494 - -0.9 2,516,505 - -0.7 2,516,715 + EX28DRAFT_2485 0.23 -1.1 2,516,717 + EX28DRAFT_2485 0.23 -1.8 2,516,717 + EX28DRAFT_2485 0.23 -1.0 2,516,718 - EX28DRAFT_2485 0.23 -3.4 2,516,718 - EX28DRAFT_2485 0.23 -2.9 2,516,906 + EX28DRAFT_2485 0.54 -1.5 2,516,906 + EX28DRAFT_2485 0.54 -2.1 2,516,907 - EX28DRAFT_2485 0.54 +0.2 2,516,907 - EX28DRAFT_2485 0.54 -1.1 2,517,516 - -1.1 2,517,516 - -2.9 2,517,554 + -2.3 2,517,555 - -1.8 2,517,555 - -1.1 2,517,555 - -1.1 2,517,555 - -0.8
Or see this region's nucleotide sequence