Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2480 and EX28DRAFT_2481 are separated by 92 nucleotides EX28DRAFT_2481 and EX28DRAFT_2482 are separated by 62 nucleotides
EX28DRAFT_2480: EX28DRAFT_2480 - transporter, monovalent cation:proton antiporter-2 (CPA2) family, at 2,509,531 to 2,511,207
_2480
EX28DRAFT_2481: EX28DRAFT_2481 - Sugar kinases, ribokinase family, at 2,511,300 to 2,512,604
_2481
EX28DRAFT_2482: EX28DRAFT_2482 - ferrochelatase (EC 4.99.1.1), at 2,512,667 to 2,513,629
_2482
Position (kb)
2511
2512
2513 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2510.775 kb on + strand, within EX28DRAFT_2480 at 2510.775 kb on + strand, within EX28DRAFT_2480 at 2510.776 kb on - strand, within EX28DRAFT_2480 at 2510.911 kb on - strand, within EX28DRAFT_2480 at 2511.000 kb on + strand, within EX28DRAFT_2480 at 2511.080 kb on - strand at 2511.097 kb on + strand at 2511.097 kb on + strand at 2511.097 kb on + strand at 2511.120 kb on + strand at 2511.120 kb on + strand at 2511.121 kb on - strand at 2511.153 kb on + strand at 2511.154 kb on - strand at 2511.389 kb on - strand at 2511.406 kb on + strand at 2511.411 kb on - strand at 2511.411 kb on - strand at 2511.411 kb on - strand at 2511.411 kb on - strand at 2511.434 kb on - strand, within EX28DRAFT_2481 at 2511.453 kb on - strand, within EX28DRAFT_2481 at 2511.453 kb on - strand, within EX28DRAFT_2481 at 2511.453 kb on - strand, within EX28DRAFT_2481 at 2511.453 kb on - strand, within EX28DRAFT_2481 at 2511.483 kb on - strand, within EX28DRAFT_2481 at 2511.577 kb on + strand, within EX28DRAFT_2481 at 2511.577 kb on + strand, within EX28DRAFT_2481 at 2511.578 kb on - strand, within EX28DRAFT_2481 at 2511.578 kb on - strand, within EX28DRAFT_2481 at 2511.578 kb on - strand, within EX28DRAFT_2481 at 2511.625 kb on + strand, within EX28DRAFT_2481 at 2511.733 kb on + strand, within EX28DRAFT_2481 at 2511.733 kb on + strand, within EX28DRAFT_2481 at 2511.734 kb on - strand, within EX28DRAFT_2481 at 2511.771 kb on + strand, within EX28DRAFT_2481 at 2511.772 kb on - strand, within EX28DRAFT_2481 at 2511.950 kb on - strand, within EX28DRAFT_2481 at 2511.950 kb on - strand, within EX28DRAFT_2481 at 2512.022 kb on - strand, within EX28DRAFT_2481 at 2512.094 kb on + strand, within EX28DRAFT_2481 at 2512.094 kb on + strand, within EX28DRAFT_2481 at 2512.095 kb on - strand, within EX28DRAFT_2481 at 2512.095 kb on - strand, within EX28DRAFT_2481 at 2512.119 kb on - strand, within EX28DRAFT_2481 at 2512.161 kb on - strand, within EX28DRAFT_2481 at 2512.301 kb on - strand, within EX28DRAFT_2481 at 2512.301 kb on - strand, within EX28DRAFT_2481 at 2512.301 kb on - strand, within EX28DRAFT_2481 at 2512.314 kb on - strand, within EX28DRAFT_2481 at 2512.571 kb on - strand at 2512.571 kb on - strand at 2512.626 kb on - strand at 2512.641 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,510,775 + EX28DRAFT_2480 0.74 +0.1 2,510,775 + EX28DRAFT_2480 0.74 -2.5 2,510,776 - EX28DRAFT_2480 0.74 -0.3 2,510,911 - EX28DRAFT_2480 0.82 -0.7 2,511,000 + EX28DRAFT_2480 0.88 +0.1 2,511,080 - +0.4 2,511,097 + -0.4 2,511,097 + -0.2 2,511,097 + +1.3 2,511,120 + +0.1 2,511,120 + +0.6 2,511,121 - -0.2 2,511,153 + +0.6 2,511,154 - -1.3 2,511,389 - +0.8 2,511,406 + -1.1 2,511,411 - -0.2 2,511,411 - -1.1 2,511,411 - -0.1 2,511,411 - +0.9 2,511,434 - EX28DRAFT_2481 0.10 +0.0 2,511,453 - EX28DRAFT_2481 0.12 +1.4 2,511,453 - EX28DRAFT_2481 0.12 +2.4 2,511,453 - EX28DRAFT_2481 0.12 -1.1 2,511,453 - EX28DRAFT_2481 0.12 +0.4 2,511,483 - EX28DRAFT_2481 0.14 +0.1 2,511,577 + EX28DRAFT_2481 0.21 -2.1 2,511,577 + EX28DRAFT_2481 0.21 -0.1 2,511,578 - EX28DRAFT_2481 0.21 +0.2 2,511,578 - EX28DRAFT_2481 0.21 -1.3 2,511,578 - EX28DRAFT_2481 0.21 -0.1 2,511,625 + EX28DRAFT_2481 0.25 +3.6 2,511,733 + EX28DRAFT_2481 0.33 +0.2 2,511,733 + EX28DRAFT_2481 0.33 -0.9 2,511,734 - EX28DRAFT_2481 0.33 +0.3 2,511,771 + EX28DRAFT_2481 0.36 -0.2 2,511,772 - EX28DRAFT_2481 0.36 -0.3 2,511,950 - EX28DRAFT_2481 0.50 +1.7 2,511,950 - EX28DRAFT_2481 0.50 +0.9 2,512,022 - EX28DRAFT_2481 0.55 +0.1 2,512,094 + EX28DRAFT_2481 0.61 +0.7 2,512,094 + EX28DRAFT_2481 0.61 +1.0 2,512,095 - EX28DRAFT_2481 0.61 -1.6 2,512,095 - EX28DRAFT_2481 0.61 +0.5 2,512,119 - EX28DRAFT_2481 0.63 +1.9 2,512,161 - EX28DRAFT_2481 0.66 +0.3 2,512,301 - EX28DRAFT_2481 0.77 +0.3 2,512,301 - EX28DRAFT_2481 0.77 +0.6 2,512,301 - EX28DRAFT_2481 0.77 -1.3 2,512,314 - EX28DRAFT_2481 0.78 +0.2 2,512,571 - +0.4 2,512,571 - +0.2 2,512,626 - -0.3 2,512,641 + +0.2
Or see this region's nucleotide sequence