Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2376 and EX28DRAFT_2377 are separated by 108 nucleotides EX28DRAFT_2377 and EX28DRAFT_2378 overlap by 4 nucleotides EX28DRAFT_2378 and EX28DRAFT_2379 overlap by 4 nucleotides
EX28DRAFT_2376: EX28DRAFT_2376 - Arabinose efflux permease, at 2,396,553 to 2,397,800
_2376
EX28DRAFT_2377: EX28DRAFT_2377 - ABC-type Fe3+-siderophore transport system, permease component, at 2,397,909 to 2,398,913
_2377
EX28DRAFT_2378: EX28DRAFT_2378 - ABC-type enterobactin transport system, permease component, at 2,398,910 to 2,399,902
_2378
EX28DRAFT_2379: EX28DRAFT_2379 - ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components, at 2,399,899 to 2,400,699
_2379
Position (kb)
2397
2398
2399 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2396.930 kb on + strand, within EX28DRAFT_2376 at 2396.931 kb on - strand, within EX28DRAFT_2376 at 2397.171 kb on + strand, within EX28DRAFT_2376 at 2397.461 kb on - strand, within EX28DRAFT_2376 at 2397.558 kb on - strand, within EX28DRAFT_2376 at 2397.817 kb on + strand at 2397.818 kb on - strand at 2397.865 kb on + strand at 2397.865 kb on + strand at 2397.866 kb on - strand at 2397.908 kb on + strand at 2397.908 kb on + strand at 2397.908 kb on + strand at 2397.908 kb on + strand at 2397.909 kb on - strand at 2398.345 kb on + strand, within EX28DRAFT_2377 at 2398.346 kb on - strand, within EX28DRAFT_2377 at 2398.346 kb on - strand, within EX28DRAFT_2377 at 2398.437 kb on + strand, within EX28DRAFT_2377 at 2398.648 kb on + strand, within EX28DRAFT_2377 at 2398.885 kb on + strand at 2398.933 kb on - strand at 2399.088 kb on + strand, within EX28DRAFT_2378 at 2399.392 kb on + strand, within EX28DRAFT_2378 at 2399.549 kb on - strand, within EX28DRAFT_2378
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,396,930 + EX28DRAFT_2376 0.30 +0.3 2,396,931 - EX28DRAFT_2376 0.30 +0.1 2,397,171 + EX28DRAFT_2376 0.50 +0.3 2,397,461 - EX28DRAFT_2376 0.73 -0.9 2,397,558 - EX28DRAFT_2376 0.81 +0.9 2,397,817 + -1.5 2,397,818 - -0.4 2,397,865 + +0.1 2,397,865 + +0.3 2,397,866 - -0.1 2,397,908 + -0.7 2,397,908 + -0.1 2,397,908 + +0.0 2,397,908 + -0.8 2,397,909 - -0.3 2,398,345 + EX28DRAFT_2377 0.43 -0.8 2,398,346 - EX28DRAFT_2377 0.43 -1.4 2,398,346 - EX28DRAFT_2377 0.43 -0.5 2,398,437 + EX28DRAFT_2377 0.53 -0.2 2,398,648 + EX28DRAFT_2377 0.74 -0.1 2,398,885 + -1.2 2,398,933 - -3.9 2,399,088 + EX28DRAFT_2378 0.18 +0.8 2,399,392 + EX28DRAFT_2378 0.49 +1.1 2,399,549 - EX28DRAFT_2378 0.64 -0.7
Or see this region's nucleotide sequence