Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2045

Experiment: MS_media with arsenate 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2044 and EX28DRAFT_2045 are separated by 114 nucleotidesEX28DRAFT_2045 and EX28DRAFT_2046 overlap by 1 nucleotides EX28DRAFT_2044: EX28DRAFT_2044 - thioredoxin-disulfide reductase, at 2,063,422 to 2,064,417 _2044 EX28DRAFT_2045: EX28DRAFT_2045 - thiol reductant ABC exporter, CydD subunit, at 2,064,532 to 2,066,298 _2045 EX28DRAFT_2046: EX28DRAFT_2046 - thiol reductant ABC exporter, CydC subunit, at 2,066,298 to 2,068,019 _2046 Position (kb) 2064 2065 2066 2067Strain fitness (log2 ratio) -1 0 1at 2064.445 kb on + strandat 2064.557 kb on + strandat 2064.941 kb on - strand, within EX28DRAFT_2045at 2066.316 kb on + strandat 2066.475 kb on - strand, within EX28DRAFT_2046at 2066.589 kb on + strand, within EX28DRAFT_2046

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM
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2,064,445 + +0.2
2,064,557 + +0.2
2,064,941 - EX28DRAFT_2045 0.23 -1.0
2,066,316 + +0.2
2,066,475 - EX28DRAFT_2046 0.10 -1.6
2,066,589 + EX28DRAFT_2046 0.17 -0.1

Or see this region's nucleotide sequence