Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2036 and EX28DRAFT_2037 are separated by 1 nucleotides EX28DRAFT_2037 and EX28DRAFT_2038 are separated by 10 nucleotides
EX28DRAFT_2036: EX28DRAFT_2036 - DMSO reductase anchor subunit, at 2,050,943 to 2,051,806
_2036
EX28DRAFT_2037: EX28DRAFT_2037 - DMSO reductase, iron-sulfur subunit, at 2,051,808 to 2,052,425
_2037
EX28DRAFT_2038: EX28DRAFT_2038 - anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family, at 2,052,436 to 2,054,880
_2038
Position (kb)
2051
2052
2053 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2050.810 kb on + strand at 2050.811 kb on - strand at 2050.927 kb on - strand at 2050.960 kb on + strand at 2050.961 kb on - strand at 2050.961 kb on - strand at 2050.964 kb on + strand at 2050.965 kb on - strand at 2050.972 kb on + strand at 2050.983 kb on + strand at 2051.062 kb on - strand, within EX28DRAFT_2036 at 2051.368 kb on - strand, within EX28DRAFT_2036 at 2051.368 kb on - strand, within EX28DRAFT_2036 at 2051.397 kb on + strand, within EX28DRAFT_2036 at 2051.397 kb on + strand, within EX28DRAFT_2036 at 2051.398 kb on - strand, within EX28DRAFT_2036 at 2051.853 kb on - strand at 2051.853 kb on - strand at 2052.080 kb on - strand, within EX28DRAFT_2037 at 2052.307 kb on + strand, within EX28DRAFT_2037 at 2052.402 kb on - strand at 2052.523 kb on - strand at 2052.652 kb on - strand at 2052.736 kb on + strand, within EX28DRAFT_2038 at 2052.737 kb on - strand, within EX28DRAFT_2038 at 2052.827 kb on + strand, within EX28DRAFT_2038 at 2052.828 kb on - strand, within EX28DRAFT_2038 at 2052.828 kb on - strand, within EX28DRAFT_2038 at 2052.828 kb on - strand, within EX28DRAFT_2038 at 2052.828 kb on - strand, within EX28DRAFT_2038 at 2052.848 kb on + strand, within EX28DRAFT_2038 at 2052.848 kb on + strand, within EX28DRAFT_2038 at 2052.849 kb on - strand, within EX28DRAFT_2038 at 2052.924 kb on - strand, within EX28DRAFT_2038 at 2053.025 kb on + strand, within EX28DRAFT_2038 at 2053.025 kb on + strand, within EX28DRAFT_2038 at 2053.026 kb on - strand, within EX28DRAFT_2038 at 2053.026 kb on - strand, within EX28DRAFT_2038 at 2053.026 kb on - strand, within EX28DRAFT_2038 at 2053.029 kb on + strand, within EX28DRAFT_2038 at 2053.119 kb on + strand, within EX28DRAFT_2038 at 2053.182 kb on - strand, within EX28DRAFT_2038 at 2053.236 kb on - strand, within EX28DRAFT_2038 at 2053.317 kb on - strand, within EX28DRAFT_2038
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,050,810 + +0.6 2,050,811 - +0.6 2,050,927 - +0.8 2,050,960 + -0.3 2,050,961 - -1.3 2,050,961 - -1.0 2,050,964 + +0.3 2,050,965 - -1.4 2,050,972 + +0.3 2,050,983 + +0.3 2,051,062 - EX28DRAFT_2036 0.14 +0.2 2,051,368 - EX28DRAFT_2036 0.49 -0.4 2,051,368 - EX28DRAFT_2036 0.49 -0.4 2,051,397 + EX28DRAFT_2036 0.53 -0.9 2,051,397 + EX28DRAFT_2036 0.53 -0.4 2,051,398 - EX28DRAFT_2036 0.53 +0.7 2,051,853 - +1.2 2,051,853 - -0.5 2,052,080 - EX28DRAFT_2037 0.44 -0.7 2,052,307 + EX28DRAFT_2037 0.81 -1.2 2,052,402 - +1.8 2,052,523 - +0.5 2,052,652 - +0.4 2,052,736 + EX28DRAFT_2038 0.12 -0.4 2,052,737 - EX28DRAFT_2038 0.12 -0.7 2,052,827 + EX28DRAFT_2038 0.16 +0.3 2,052,828 - EX28DRAFT_2038 0.16 +0.6 2,052,828 - EX28DRAFT_2038 0.16 -0.1 2,052,828 - EX28DRAFT_2038 0.16 +0.7 2,052,828 - EX28DRAFT_2038 0.16 -0.5 2,052,848 + EX28DRAFT_2038 0.17 -3.4 2,052,848 + EX28DRAFT_2038 0.17 +0.9 2,052,849 - EX28DRAFT_2038 0.17 +0.1 2,052,924 - EX28DRAFT_2038 0.20 -0.8 2,053,025 + EX28DRAFT_2038 0.24 -0.6 2,053,025 + EX28DRAFT_2038 0.24 -0.3 2,053,026 - EX28DRAFT_2038 0.24 -0.1 2,053,026 - EX28DRAFT_2038 0.24 -0.6 2,053,026 - EX28DRAFT_2038 0.24 +1.2 2,053,029 + EX28DRAFT_2038 0.24 +1.5 2,053,119 + EX28DRAFT_2038 0.28 -1.6 2,053,182 - EX28DRAFT_2038 0.31 +0.3 2,053,236 - EX28DRAFT_2038 0.33 +0.8 2,053,317 - EX28DRAFT_2038 0.36 +1.1
Or see this region's nucleotide sequence