Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1732 and EX28DRAFT_1733 are separated by 101 nucleotides EX28DRAFT_1733 and EX28DRAFT_1734 are separated by 127 nucleotides EX28DRAFT_1734 and EX28DRAFT_1735 are separated by 48 nucleotides EX28DRAFT_1735 and EX28DRAFT_1736 are separated by 50 nucleotides
EX28DRAFT_1732: EX28DRAFT_1732 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 1,746,886 to 1,747,557
_1732
EX28DRAFT_1733: EX28DRAFT_1733 - Predicted membrane-bound metal-dependent hydrolases, at 1,747,659 to 1,748,249
_1733
EX28DRAFT_1734: EX28DRAFT_1734 - Predicted Na+/dicarboxylate symporter, at 1,748,377 to 1,749,768
_1734
EX28DRAFT_1735: EX28DRAFT_1735 - Cell division activator CedA, at 1,749,817 to 1,750,209
_1735
EX28DRAFT_1736: EX28DRAFT_1736 - Catalase, at 1,750,260 to 1,752,509
_1736
Position (kb)
1748
1749
1750 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 1747.512 kb on + strand at 1747.512 kb on + strand at 1747.612 kb on + strand at 1747.623 kb on + strand at 1747.626 kb on - strand at 1747.656 kb on - strand at 1747.702 kb on + strand at 1747.703 kb on - strand at 1747.757 kb on + strand, within EX28DRAFT_1733 at 1747.757 kb on + strand, within EX28DRAFT_1733 at 1747.758 kb on - strand, within EX28DRAFT_1733 at 1747.758 kb on - strand, within EX28DRAFT_1733 at 1747.808 kb on + strand, within EX28DRAFT_1733 at 1747.987 kb on - strand, within EX28DRAFT_1733 at 1747.991 kb on - strand, within EX28DRAFT_1733 at 1748.131 kb on - strand, within EX28DRAFT_1733 at 1748.226 kb on - strand at 1748.294 kb on - strand at 1748.359 kb on + strand at 1748.360 kb on - strand at 1748.417 kb on + strand at 1748.417 kb on + strand at 1748.417 kb on + strand at 1748.418 kb on - strand at 1748.418 kb on - strand at 1748.418 kb on - strand at 1748.424 kb on - strand at 1748.501 kb on + strand at 1748.528 kb on - strand, within EX28DRAFT_1734 at 1748.559 kb on + strand, within EX28DRAFT_1734 at 1748.559 kb on + strand, within EX28DRAFT_1734 at 1748.560 kb on - strand, within EX28DRAFT_1734 at 1748.627 kb on + strand, within EX28DRAFT_1734 at 1748.638 kb on - strand, within EX28DRAFT_1734 at 1748.836 kb on + strand, within EX28DRAFT_1734 at 1748.836 kb on + strand, within EX28DRAFT_1734 at 1748.836 kb on + strand, within EX28DRAFT_1734 at 1748.836 kb on + strand, within EX28DRAFT_1734 at 1748.836 kb on + strand, within EX28DRAFT_1734 at 1748.837 kb on - strand, within EX28DRAFT_1734 at 1748.837 kb on - strand, within EX28DRAFT_1734 at 1748.837 kb on - strand, within EX28DRAFT_1734 at 1748.837 kb on - strand, within EX28DRAFT_1734 at 1748.837 kb on - strand, within EX28DRAFT_1734 at 1749.195 kb on + strand, within EX28DRAFT_1734 at 1749.195 kb on + strand, within EX28DRAFT_1734 at 1749.196 kb on - strand, within EX28DRAFT_1734 at 1749.819 kb on - strand at 1749.933 kb on - strand, within EX28DRAFT_1735 at 1749.933 kb on - strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.016 kb on + strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.017 kb on - strand, within EX28DRAFT_1735 at 1750.020 kb on + strand, within EX28DRAFT_1735 at 1750.020 kb on + strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.021 kb on - strand, within EX28DRAFT_1735 at 1750.023 kb on + strand, within EX28DRAFT_1735 at 1750.102 kb on - strand, within EX28DRAFT_1735 at 1750.197 kb on + strand at 1750.197 kb on + strand at 1750.198 kb on - strand at 1750.215 kb on + strand at 1750.216 kb on - strand at 1750.222 kb on - strand at 1750.224 kb on + strand at 1750.394 kb on + strand at 1750.394 kb on + strand at 1750.668 kb on + strand, within EX28DRAFT_1736 at 1750.754 kb on - strand, within EX28DRAFT_1736
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,747,512 + -1.0 1,747,512 + +0.1 1,747,612 + -0.2 1,747,623 + +0.5 1,747,626 - +1.2 1,747,656 - +0.3 1,747,702 + -0.3 1,747,703 - +0.8 1,747,757 + EX28DRAFT_1733 0.17 -0.2 1,747,757 + EX28DRAFT_1733 0.17 -1.7 1,747,758 - EX28DRAFT_1733 0.17 +1.7 1,747,758 - EX28DRAFT_1733 0.17 +0.6 1,747,808 + EX28DRAFT_1733 0.25 +0.3 1,747,987 - EX28DRAFT_1733 0.55 -0.5 1,747,991 - EX28DRAFT_1733 0.56 -1.3 1,748,131 - EX28DRAFT_1733 0.80 -0.4 1,748,226 - -0.5 1,748,294 - +0.2 1,748,359 + +0.1 1,748,360 - -4.3 1,748,417 + +1.2 1,748,417 + -0.7 1,748,417 + -0.4 1,748,418 - -0.1 1,748,418 - -0.2 1,748,418 - -1.4 1,748,424 - -0.1 1,748,501 + -2.5 1,748,528 - EX28DRAFT_1734 0.11 -0.2 1,748,559 + EX28DRAFT_1734 0.13 -0.6 1,748,559 + EX28DRAFT_1734 0.13 +0.3 1,748,560 - EX28DRAFT_1734 0.13 +0.0 1,748,627 + EX28DRAFT_1734 0.18 -0.3 1,748,638 - EX28DRAFT_1734 0.19 -1.5 1,748,836 + EX28DRAFT_1734 0.33 -0.3 1,748,836 + EX28DRAFT_1734 0.33 -1.3 1,748,836 + EX28DRAFT_1734 0.33 -0.7 1,748,836 + EX28DRAFT_1734 0.33 -0.5 1,748,836 + EX28DRAFT_1734 0.33 -0.7 1,748,837 - EX28DRAFT_1734 0.33 +0.8 1,748,837 - EX28DRAFT_1734 0.33 -0.8 1,748,837 - EX28DRAFT_1734 0.33 +0.2 1,748,837 - EX28DRAFT_1734 0.33 -4.8 1,748,837 - EX28DRAFT_1734 0.33 -0.2 1,749,195 + EX28DRAFT_1734 0.59 +0.1 1,749,195 + EX28DRAFT_1734 0.59 -0.0 1,749,196 - EX28DRAFT_1734 0.59 +0.2 1,749,819 - -1.5 1,749,933 - EX28DRAFT_1735 0.30 -0.2 1,749,933 - EX28DRAFT_1735 0.30 -0.9 1,750,016 + EX28DRAFT_1735 0.51 +0.3 1,750,016 + EX28DRAFT_1735 0.51 +0.4 1,750,016 + EX28DRAFT_1735 0.51 -0.8 1,750,016 + EX28DRAFT_1735 0.51 -1.6 1,750,016 + EX28DRAFT_1735 0.51 -0.8 1,750,016 + EX28DRAFT_1735 0.51 +0.5 1,750,016 + EX28DRAFT_1735 0.51 -0.7 1,750,017 - EX28DRAFT_1735 0.51 -0.2 1,750,017 - EX28DRAFT_1735 0.51 -1.9 1,750,017 - EX28DRAFT_1735 0.51 -2.4 1,750,017 - EX28DRAFT_1735 0.51 +0.0 1,750,017 - EX28DRAFT_1735 0.51 -3.3 1,750,017 - EX28DRAFT_1735 0.51 -0.4 1,750,020 + EX28DRAFT_1735 0.52 -0.0 1,750,020 + EX28DRAFT_1735 0.52 -0.9 1,750,021 - EX28DRAFT_1735 0.52 -0.9 1,750,021 - EX28DRAFT_1735 0.52 -0.6 1,750,021 - EX28DRAFT_1735 0.52 -0.6 1,750,021 - EX28DRAFT_1735 0.52 +1.0 1,750,021 - EX28DRAFT_1735 0.52 -0.7 1,750,021 - EX28DRAFT_1735 0.52 +0.5 1,750,023 + EX28DRAFT_1735 0.52 -0.7 1,750,102 - EX28DRAFT_1735 0.73 -0.4 1,750,197 + +0.1 1,750,197 + +0.5 1,750,198 - -0.5 1,750,215 + -1.4 1,750,216 - -0.0 1,750,222 - -0.4 1,750,224 + +0.2 1,750,394 + -0.6 1,750,394 + +0.3 1,750,668 + EX28DRAFT_1736 0.18 -1.4 1,750,754 - EX28DRAFT_1736 0.22 -0.4
Or see this region's nucleotide sequence