Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1710 and EX28DRAFT_1711 are separated by 44 nucleotides EX28DRAFT_1711 and EX28DRAFT_1712 are separated by 10 nucleotides EX28DRAFT_1712 and EX28DRAFT_1713 are separated by 40 nucleotides
EX28DRAFT_1710: EX28DRAFT_1710 - acetyl-CoA acetyltransferases, at 1,726,025 to 1,727,206
_1710
EX28DRAFT_1711: EX28DRAFT_1711 - H+/gluconate symporter and related permeases, at 1,727,251 to 1,728,642
_1711
EX28DRAFT_1712: EX28DRAFT_1712 - 3-hydroxybutyrate dehydrogenase, at 1,728,653 to 1,729,423
_1712
EX28DRAFT_1713: EX28DRAFT_1713 - Uncharacterized conserved protein, at 1,729,464 to 1,730,906
_1713
Position (kb)
1727
1728
1729 Strain fitness (log2 ratio)
-2
-1
0
1 at 1726.300 kb on - strand, within EX28DRAFT_1710 at 1726.660 kb on + strand, within EX28DRAFT_1710 at 1726.862 kb on + strand, within EX28DRAFT_1710 at 1727.118 kb on - strand at 1727.227 kb on + strand at 1727.227 kb on + strand at 1727.235 kb on - strand at 1727.320 kb on - strand at 1727.320 kb on - strand at 1727.434 kb on + strand, within EX28DRAFT_1711 at 1727.434 kb on + strand, within EX28DRAFT_1711 at 1727.434 kb on + strand, within EX28DRAFT_1711 at 1727.434 kb on + strand, within EX28DRAFT_1711 at 1727.435 kb on - strand, within EX28DRAFT_1711 at 1727.582 kb on - strand, within EX28DRAFT_1711 at 1727.745 kb on + strand, within EX28DRAFT_1711 at 1727.746 kb on - strand, within EX28DRAFT_1711 at 1727.746 kb on - strand, within EX28DRAFT_1711 at 1727.817 kb on + strand, within EX28DRAFT_1711 at 1727.818 kb on - strand, within EX28DRAFT_1711 at 1727.818 kb on - strand, within EX28DRAFT_1711 at 1727.859 kb on + strand, within EX28DRAFT_1711 at 1727.979 kb on - strand, within EX28DRAFT_1711 at 1728.381 kb on + strand, within EX28DRAFT_1711 at 1728.382 kb on - strand, within EX28DRAFT_1711 at 1728.436 kb on - strand, within EX28DRAFT_1711 at 1728.489 kb on + strand, within EX28DRAFT_1711 at 1728.585 kb on + strand at 1728.724 kb on - strand at 1728.921 kb on + strand, within EX28DRAFT_1712 at 1729.128 kb on + strand, within EX28DRAFT_1712 at 1729.129 kb on - strand, within EX28DRAFT_1712 at 1729.519 kb on + strand at 1729.519 kb on + strand at 1729.520 kb on - strand at 1729.572 kb on + strand at 1729.582 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,726,300 - EX28DRAFT_1710 0.23 -0.5 1,726,660 + EX28DRAFT_1710 0.54 -0.2 1,726,862 + EX28DRAFT_1710 0.71 +0.2 1,727,118 - +0.2 1,727,227 + +1.1 1,727,227 + +0.9 1,727,235 - +0.3 1,727,320 - -0.2 1,727,320 - -0.5 1,727,434 + EX28DRAFT_1711 0.13 -1.0 1,727,434 + EX28DRAFT_1711 0.13 +0.2 1,727,434 + EX28DRAFT_1711 0.13 -0.1 1,727,434 + EX28DRAFT_1711 0.13 +0.0 1,727,435 - EX28DRAFT_1711 0.13 +0.2 1,727,582 - EX28DRAFT_1711 0.24 -2.1 1,727,745 + EX28DRAFT_1711 0.35 +0.7 1,727,746 - EX28DRAFT_1711 0.36 -0.4 1,727,746 - EX28DRAFT_1711 0.36 +0.0 1,727,817 + EX28DRAFT_1711 0.41 -0.7 1,727,818 - EX28DRAFT_1711 0.41 -1.3 1,727,818 - EX28DRAFT_1711 0.41 -0.4 1,727,859 + EX28DRAFT_1711 0.44 -1.1 1,727,979 - EX28DRAFT_1711 0.52 -1.2 1,728,381 + EX28DRAFT_1711 0.81 +0.3 1,728,382 - EX28DRAFT_1711 0.81 +0.6 1,728,436 - EX28DRAFT_1711 0.85 +0.6 1,728,489 + EX28DRAFT_1711 0.89 +0.2 1,728,585 + -0.4 1,728,724 - -0.0 1,728,921 + EX28DRAFT_1712 0.35 +0.0 1,729,128 + EX28DRAFT_1712 0.62 +0.3 1,729,129 - EX28DRAFT_1712 0.62 -0.6 1,729,519 + +0.1 1,729,519 + -0.5 1,729,520 - -0.8 1,729,572 + +0.9 1,729,582 + -1.7
Or see this region's nucleotide sequence