Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0768 and EX28DRAFT_0769 are separated by 97 nucleotides EX28DRAFT_0769 and EX28DRAFT_0770 are separated by 107 nucleotides EX28DRAFT_0770 and EX28DRAFT_0771 are separated by 37 nucleotides
EX28DRAFT_0768: EX28DRAFT_0768 - NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain, at 765,065 to 766,798
_0768
EX28DRAFT_0769: EX28DRAFT_0769 - Uncharacterized proteins, homologs of microcin C7 resistance protein MccF, at 766,896 to 767,810
_0769
EX28DRAFT_0770: EX28DRAFT_0770 - Transglycosylase SLT domain, at 767,918 to 768,529
_0770
EX28DRAFT_0771: EX28DRAFT_0771 - Predicted glycosyltransferase, at 768,567 to 769,298
_0771
Position (kb) 766
767
768 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 766.018 kb on + strand, within EX28DRAFT_0768 at 766.228 kb on + strand, within EX28DRAFT_0768 at 766.229 kb on - strand, within EX28DRAFT_0768 at 766.232 kb on + strand, within EX28DRAFT_0768 at 766.288 kb on + strand, within EX28DRAFT_0768 at 766.289 kb on - strand, within EX28DRAFT_0768 at 766.445 kb on - strand, within EX28DRAFT_0768 at 766.627 kb on - strand at 766.643 kb on - strand at 766.699 kb on + strand at 766.699 kb on + strand at 766.699 kb on + strand at 766.699 kb on + strand at 766.700 kb on - strand at 766.700 kb on - strand at 766.700 kb on - strand at 766.700 kb on - strand at 766.700 kb on - strand at 766.703 kb on + strand at 766.704 kb on - strand at 766.704 kb on - strand at 766.704 kb on - strand at 766.731 kb on - strand at 766.807 kb on + strand at 766.808 kb on - strand at 766.837 kb on - strand at 766.849 kb on + strand at 766.850 kb on - strand at 766.850 kb on - strand at 766.853 kb on - strand at 766.873 kb on - strand at 766.873 kb on - strand at 766.883 kb on + strand at 766.883 kb on + strand at 766.883 kb on + strand at 766.897 kb on + strand at 767.172 kb on + strand, within EX28DRAFT_0769 at 767.173 kb on - strand, within EX28DRAFT_0769 at 767.836 kb on + strand at 767.837 kb on - strand at 767.844 kb on + strand at 767.844 kb on + strand at 767.844 kb on + strand at 767.844 kb on + strand at 767.845 kb on - strand at 767.858 kb on + strand at 767.860 kb on + strand at 767.861 kb on - strand at 767.861 kb on - strand at 767.861 kb on - strand at 767.904 kb on + strand at 767.910 kb on + strand at 767.910 kb on + strand at 767.911 kb on - strand at 767.911 kb on - strand at 768.200 kb on + strand, within EX28DRAFT_0770 at 768.200 kb on + strand, within EX28DRAFT_0770 at 768.286 kb on + strand, within EX28DRAFT_0770 at 768.336 kb on - strand, within EX28DRAFT_0770 at 768.491 kb on + strand at 768.493 kb on + strand at 768.494 kb on - strand at 768.528 kb on - strand at 768.528 kb on - strand at 768.528 kb on - strand at 768.528 kb on - strand at 768.614 kb on - strand at 768.618 kb on - strand at 768.751 kb on + strand, within EX28DRAFT_0771
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 766,018 + EX28DRAFT_0768 0.55 -0.5 766,228 + EX28DRAFT_0768 0.67 -0.4 766,229 - EX28DRAFT_0768 0.67 +0.2 766,232 + EX28DRAFT_0768 0.67 -0.1 766,288 + EX28DRAFT_0768 0.71 -1.1 766,289 - EX28DRAFT_0768 0.71 +0.3 766,445 - EX28DRAFT_0768 0.80 -0.2 766,627 - -1.6 766,643 - -2.0 766,699 + -0.3 766,699 + -0.1 766,699 + -0.8 766,699 + +0.5 766,700 - -1.0 766,700 - -0.1 766,700 - -1.0 766,700 - -0.3 766,700 - +0.3 766,703 + -0.1 766,704 - -1.7 766,704 - +0.2 766,704 - -0.3 766,731 - -4.8 766,807 + -0.3 766,808 - -1.3 766,837 - +0.7 766,849 + -0.4 766,850 - -0.6 766,850 - -0.3 766,853 - -2.1 766,873 - +0.5 766,873 - +0.2 766,883 + -3.0 766,883 + +1.7 766,883 + -0.4 766,897 + +0.8 767,172 + EX28DRAFT_0769 0.30 -0.5 767,173 - EX28DRAFT_0769 0.30 -1.8 767,836 + +1.0 767,837 - -0.3 767,844 + -0.1 767,844 + +0.5 767,844 + -0.1 767,844 + +0.1 767,845 - -0.0 767,858 + -0.4 767,860 + +0.4 767,861 - -0.0 767,861 - -0.8 767,861 - -0.5 767,904 + -0.2 767,910 + +0.1 767,910 + -1.2 767,911 - +0.6 767,911 - -0.6 768,200 + EX28DRAFT_0770 0.46 -0.2 768,200 + EX28DRAFT_0770 0.46 -1.1 768,286 + EX28DRAFT_0770 0.60 +0.2 768,336 - EX28DRAFT_0770 0.68 -0.5 768,491 + -0.3 768,493 + -0.2 768,494 - -0.5 768,528 - -1.1 768,528 - -0.4 768,528 - -0.3 768,528 - -0.2 768,614 - -0.2 768,618 - -0.1 768,751 + EX28DRAFT_0771 0.25 -0.5
Or see this region's nucleotide sequence