Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0333 and EX28DRAFT_0334 are separated by 6 nucleotides EX28DRAFT_0334 and EX28DRAFT_0335 are separated by 92 nucleotides
EX28DRAFT_0333: EX28DRAFT_0333 - proton-translocating NADH-quinone oxidoreductase, chain M, at 294,565 to 296,094
_0333
EX28DRAFT_0334: EX28DRAFT_0334 - proton-translocating NADH-quinone oxidoreductase, chain N, at 296,101 to 297,558
_0334
EX28DRAFT_0335: EX28DRAFT_0335 - Chemotaxis signal transduction protein, at 297,651 to 298,655
_0335
Position (kb) 296
297
298 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 295.551 kb on + strand, within EX28DRAFT_0333 at 295.552 kb on - strand, within EX28DRAFT_0333 at 295.556 kb on - strand, within EX28DRAFT_0333 at 295.681 kb on - strand, within EX28DRAFT_0333 at 295.867 kb on + strand, within EX28DRAFT_0333 at 295.868 kb on - strand, within EX28DRAFT_0333 at 296.079 kb on + strand at 296.092 kb on + strand at 296.108 kb on + strand at 296.576 kb on - strand, within EX28DRAFT_0334 at 296.576 kb on - strand, within EX28DRAFT_0334 at 296.632 kb on + strand, within EX28DRAFT_0334 at 297.504 kb on + strand at 297.508 kb on + strand at 297.652 kb on + strand at 297.652 kb on + strand at 297.653 kb on - strand at 298.007 kb on + strand, within EX28DRAFT_0335 at 298.007 kb on + strand, within EX28DRAFT_0335 at 298.171 kb on + strand, within EX28DRAFT_0335 at 298.172 kb on - strand, within EX28DRAFT_0335 at 298.172 kb on - strand, within EX28DRAFT_0335 at 298.252 kb on + strand, within EX28DRAFT_0335 at 298.252 kb on + strand, within EX28DRAFT_0335 at 298.253 kb on - strand, within EX28DRAFT_0335 at 298.395 kb on - strand, within EX28DRAFT_0335 at 298.523 kb on + strand, within EX28DRAFT_0335
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 295,551 + EX28DRAFT_0333 0.64 -2.7 295,552 - EX28DRAFT_0333 0.65 -1.7 295,556 - EX28DRAFT_0333 0.65 -3.8 295,681 - EX28DRAFT_0333 0.73 -4.4 295,867 + EX28DRAFT_0333 0.85 -2.2 295,868 - EX28DRAFT_0333 0.85 -1.2 296,079 + -1.4 296,092 + +0.1 296,108 + -1.0 296,576 - EX28DRAFT_0334 0.33 -3.6 296,576 - EX28DRAFT_0334 0.33 -0.9 296,632 + EX28DRAFT_0334 0.36 -1.4 297,504 + -0.1 297,508 + -0.3 297,652 + -0.1 297,652 + +0.1 297,653 - +0.4 298,007 + EX28DRAFT_0335 0.35 -0.4 298,007 + EX28DRAFT_0335 0.35 -1.2 298,171 + EX28DRAFT_0335 0.52 -1.1 298,172 - EX28DRAFT_0335 0.52 +0.0 298,172 - EX28DRAFT_0335 0.52 -2.6 298,252 + EX28DRAFT_0335 0.60 -2.4 298,252 + EX28DRAFT_0335 0.60 -0.4 298,253 - EX28DRAFT_0335 0.60 +0.3 298,395 - EX28DRAFT_0335 0.74 -4.4 298,523 + EX28DRAFT_0335 0.87 -0.5
Or see this region's nucleotide sequence