Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0249 and EX28DRAFT_0250 are separated by 16 nucleotides EX28DRAFT_0250 and EX28DRAFT_0251 are separated by 45 nucleotides
EX28DRAFT_0249: EX28DRAFT_0249 - Rhs element Vgr protein, at 205,663 to 208,035
_0249
EX28DRAFT_0250: EX28DRAFT_0250 - PAAR motif, at 208,052 to 208,318
_0250
EX28DRAFT_0251: EX28DRAFT_0251 - hypothetical protein, at 208,364 to 211,159
_0251
Position (kb) 208
209 Strain fitness (log2 ratio) -2
-1
0
1
2 at 207.065 kb on - strand, within EX28DRAFT_0249 at 207.122 kb on - strand, within EX28DRAFT_0249 at 207.193 kb on - strand, within EX28DRAFT_0249 at 207.211 kb on + strand, within EX28DRAFT_0249 at 207.334 kb on - strand, within EX28DRAFT_0249 at 207.579 kb on - strand, within EX28DRAFT_0249 at 207.630 kb on + strand, within EX28DRAFT_0249 at 207.633 kb on + strand, within EX28DRAFT_0249 at 207.710 kb on - strand, within EX28DRAFT_0249 at 207.710 kb on - strand, within EX28DRAFT_0249 at 207.810 kb on + strand at 207.820 kb on - strand at 207.855 kb on + strand at 207.916 kb on - strand at 208.020 kb on - strand at 208.030 kb on - strand at 208.033 kb on + strand at 208.036 kb on + strand at 208.159 kb on + strand, within EX28DRAFT_0250 at 208.234 kb on - strand, within EX28DRAFT_0250 at 208.234 kb on - strand, within EX28DRAFT_0250 at 208.283 kb on - strand, within EX28DRAFT_0250 at 208.343 kb on + strand at 208.363 kb on + strand at 208.380 kb on + strand at 208.381 kb on - strand at 208.418 kb on + strand at 208.442 kb on - strand at 208.444 kb on + strand at 208.445 kb on - strand at 208.511 kb on + strand at 208.538 kb on + strand at 208.545 kb on - strand at 208.592 kb on + strand at 208.684 kb on + strand, within EX28DRAFT_0251 at 208.684 kb on + strand, within EX28DRAFT_0251 at 208.684 kb on + strand, within EX28DRAFT_0251 at 208.726 kb on + strand, within EX28DRAFT_0251 at 208.835 kb on - strand, within EX28DRAFT_0251 at 208.837 kb on - strand, within EX28DRAFT_0251 at 209.184 kb on + strand, within EX28DRAFT_0251
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 207,065 - EX28DRAFT_0249 0.59 -0.0 207,122 - EX28DRAFT_0249 0.61 -0.1 207,193 - EX28DRAFT_0249 0.64 -1.4 207,211 + EX28DRAFT_0249 0.65 +0.1 207,334 - EX28DRAFT_0249 0.70 -0.4 207,579 - EX28DRAFT_0249 0.81 +1.1 207,630 + EX28DRAFT_0249 0.83 +0.1 207,633 + EX28DRAFT_0249 0.83 -0.7 207,710 - EX28DRAFT_0249 0.86 -0.2 207,710 - EX28DRAFT_0249 0.86 +0.3 207,810 + -0.4 207,820 - +0.1 207,855 + +0.2 207,916 - -2.4 208,020 - +0.7 208,030 - +0.3 208,033 + +0.2 208,036 + -0.1 208,159 + EX28DRAFT_0250 0.40 -2.6 208,234 - EX28DRAFT_0250 0.68 -1.9 208,234 - EX28DRAFT_0250 0.68 -0.6 208,283 - EX28DRAFT_0250 0.87 +0.4 208,343 + -1.2 208,363 + -0.3 208,380 + +0.7 208,381 - +1.0 208,418 + -0.8 208,442 - +0.2 208,444 + -0.6 208,445 - +0.4 208,511 + -0.3 208,538 + +0.2 208,545 - +0.3 208,592 + -0.8 208,684 + EX28DRAFT_0251 0.11 +1.8 208,684 + EX28DRAFT_0251 0.11 +0.2 208,684 + EX28DRAFT_0251 0.11 +1.1 208,726 + EX28DRAFT_0251 0.13 -0.1 208,835 - EX28DRAFT_0251 0.17 -0.8 208,837 - EX28DRAFT_0251 0.17 +0.1 209,184 + EX28DRAFT_0251 0.29 +0.9
Or see this region's nucleotide sequence