Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0182 and EX28DRAFT_0183 are separated by 16 nucleotides EX28DRAFT_0183 and EX28DRAFT_0184 are separated by 109 nucleotides EX28DRAFT_0184 and EX28DRAFT_0185 are separated by 120 nucleotides
EX28DRAFT_0182: EX28DRAFT_0182 - 4-hydroxy-tetrahydrodipicolinate synthase, at 131,566 to 132,444
_0182
EX28DRAFT_0183: EX28DRAFT_0183 - Uncharacterized lipoprotein, at 132,461 to 133,495
_0183
EX28DRAFT_0184: EX28DRAFT_0184 - phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6), at 133,605 to 134,318
_0184
EX28DRAFT_0185: EX28DRAFT_0185 - Predicted metalloprotease, at 134,439 to 135,308
_0185
Position (kb) 132
133
134 Strain fitness (log2 ratio) -1
0
1 at 131.479 kb on + strand at 131.479 kb on + strand at 131.479 kb on + strand at 131.479 kb on + strand at 131.479 kb on + strand at 131.479 kb on + strand at 131.479 kb on + strand at 131.479 kb on + strand at 131.479 kb on + strand at 131.480 kb on - strand at 131.480 kb on - strand at 131.480 kb on - strand at 131.480 kb on - strand at 131.480 kb on - strand at 132.517 kb on + strand at 132.653 kb on + strand, within EX28DRAFT_0183 at 132.653 kb on + strand, within EX28DRAFT_0183 at 132.655 kb on + strand, within EX28DRAFT_0183 at 132.658 kb on + strand, within EX28DRAFT_0183 at 132.658 kb on + strand, within EX28DRAFT_0183 at 132.845 kb on + strand, within EX28DRAFT_0183 at 132.846 kb on - strand, within EX28DRAFT_0183 at 132.988 kb on + strand, within EX28DRAFT_0183 at 132.988 kb on + strand, within EX28DRAFT_0183 at 133.149 kb on + strand, within EX28DRAFT_0183 at 133.298 kb on + strand, within EX28DRAFT_0183 at 133.298 kb on + strand, within EX28DRAFT_0183 at 133.367 kb on + strand, within EX28DRAFT_0183 at 133.367 kb on + strand, within EX28DRAFT_0183 at 133.367 kb on + strand, within EX28DRAFT_0183 at 133.367 kb on + strand, within EX28DRAFT_0183 at 133.368 kb on - strand, within EX28DRAFT_0183 at 134.361 kb on - strand at 134.378 kb on + strand at 134.407 kb on - strand at 134.407 kb on - strand at 134.410 kb on + strand at 134.410 kb on + strand at 134.411 kb on - strand at 134.411 kb on - strand at 134.415 kb on + strand at 134.415 kb on + strand at 134.415 kb on + strand at 134.415 kb on + strand at 134.415 kb on + strand at 134.473 kb on + strand at 134.473 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 131,479 + -0.3 131,479 + -1.1 131,479 + -0.7 131,479 + -0.8 131,479 + -1.2 131,479 + -0.3 131,479 + -0.7 131,479 + -1.1 131,479 + -0.3 131,480 - -0.6 131,480 - -1.0 131,480 - -0.1 131,480 - -0.3 131,480 - +1.0 132,517 + -0.9 132,653 + EX28DRAFT_0183 0.19 -0.1 132,653 + EX28DRAFT_0183 0.19 -0.8 132,655 + EX28DRAFT_0183 0.19 -0.4 132,658 + EX28DRAFT_0183 0.19 -0.8 132,658 + EX28DRAFT_0183 0.19 -0.2 132,845 + EX28DRAFT_0183 0.37 +0.9 132,846 - EX28DRAFT_0183 0.37 -0.7 132,988 + EX28DRAFT_0183 0.51 +0.2 132,988 + EX28DRAFT_0183 0.51 +0.4 133,149 + EX28DRAFT_0183 0.66 +0.3 133,298 + EX28DRAFT_0183 0.81 +0.8 133,298 + EX28DRAFT_0183 0.81 +0.1 133,367 + EX28DRAFT_0183 0.88 -0.8 133,367 + EX28DRAFT_0183 0.88 -1.3 133,367 + EX28DRAFT_0183 0.88 -0.2 133,367 + EX28DRAFT_0183 0.88 +0.1 133,368 - EX28DRAFT_0183 0.88 -1.3 134,361 - +0.7 134,378 + +0.0 134,407 - +0.0 134,407 - +0.1 134,410 + +0.2 134,410 + +0.7 134,411 - -0.4 134,411 - -0.7 134,415 + -0.8 134,415 + -0.2 134,415 + +0.3 134,415 + -0.5 134,415 + -0.2 134,473 + -0.4 134,473 + -0.2
Or see this region's nucleotide sequence