Experiment: m.b. nitrite 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01850 and CA264_01855 are separated by 274 nucleotides CA264_01855 and CA264_01860 are separated by 14 nucleotides CA264_01860 and CA264_01865 are separated by 385 nucleotides
CA264_01850: CA264_01850 - hypothetical protein, at 432,994 to 433,482
_01850
CA264_01855: CA264_01855 - carbonic anhydrase, at 433,757 to 434,383
_01855
CA264_01860: CA264_01860 - hypothetical protein, at 434,398 to 435,303
_01860
CA264_01865: CA264_01865 - polyisoprenoid-binding protein, at 435,689 to 436,225
_01865
Position (kb) 434
435
436 Strain fitness (log2 ratio) -2
-1
0
1
2 at 433.475 kb on - strand at 433.478 kb on - strand at 433.478 kb on - strand at 433.478 kb on - strand at 433.482 kb on + strand at 433.483 kb on - strand at 433.485 kb on - strand at 433.485 kb on - strand at 433.485 kb on - strand at 433.530 kb on - strand at 433.530 kb on - strand at 433.620 kb on - strand at 433.623 kb on + strand at 433.633 kb on + strand at 433.634 kb on - strand at 433.675 kb on - strand at 433.689 kb on - strand at 433.759 kb on - strand at 433.768 kb on - strand at 433.797 kb on + strand at 433.798 kb on - strand at 433.813 kb on + strand at 433.886 kb on + strand, within CA264_01855 at 433.886 kb on + strand, within CA264_01855 at 433.886 kb on + strand, within CA264_01855 at 433.886 kb on + strand, within CA264_01855 at 433.886 kb on + strand, within CA264_01855 at 433.886 kb on + strand, within CA264_01855 at 434.033 kb on - strand, within CA264_01855 at 434.127 kb on - strand, within CA264_01855 at 434.219 kb on + strand, within CA264_01855 at 434.371 kb on + strand at 434.386 kb on + strand at 434.391 kb on + strand at 434.391 kb on + strand at 434.391 kb on + strand at 434.399 kb on + strand at 434.399 kb on + strand at 434.399 kb on + strand at 434.399 kb on + strand at 434.403 kb on + strand at 434.403 kb on + strand at 434.404 kb on - strand at 434.404 kb on - strand at 434.408 kb on + strand at 434.408 kb on + strand at 434.408 kb on + strand at 434.409 kb on - strand at 434.409 kb on - strand at 434.409 kb on - strand at 434.409 kb on - strand at 434.411 kb on + strand at 434.412 kb on - strand at 434.464 kb on - strand at 434.558 kb on - strand, within CA264_01860 at 434.603 kb on + strand, within CA264_01860 at 434.654 kb on + strand, within CA264_01860 at 434.654 kb on + strand, within CA264_01860 at 434.654 kb on + strand, within CA264_01860 at 434.681 kb on + strand, within CA264_01860 at 434.682 kb on - strand, within CA264_01860 at 434.682 kb on - strand, within CA264_01860 at 434.686 kb on - strand, within CA264_01860 at 434.867 kb on + strand, within CA264_01860 at 434.872 kb on + strand, within CA264_01860 at 434.872 kb on + strand, within CA264_01860 at 434.873 kb on - strand, within CA264_01860 at 434.873 kb on - strand, within CA264_01860 at 434.873 kb on - strand, within CA264_01860 at 434.948 kb on + strand, within CA264_01860 at 434.970 kb on - strand, within CA264_01860 at 435.029 kb on - strand, within CA264_01860 at 435.058 kb on + strand, within CA264_01860 at 435.073 kb on + strand, within CA264_01860 at 435.117 kb on + strand, within CA264_01860 at 435.127 kb on + strand, within CA264_01860 at 435.127 kb on + strand, within CA264_01860 at 435.127 kb on + strand, within CA264_01860 at 435.128 kb on - strand, within CA264_01860 at 435.129 kb on + strand, within CA264_01860 at 435.144 kb on + strand, within CA264_01860 at 435.153 kb on + strand, within CA264_01860 at 435.185 kb on + strand, within CA264_01860 at 435.186 kb on - strand, within CA264_01860 at 435.251 kb on + strand at 435.257 kb on - strand at 435.272 kb on + strand at 435.326 kb on - strand at 435.368 kb on + strand at 435.373 kb on + strand at 435.439 kb on - strand at 435.494 kb on - strand at 435.494 kb on - strand at 435.505 kb on + strand at 435.506 kb on - strand at 435.529 kb on - strand at 435.532 kb on - strand at 435.584 kb on + strand at 435.626 kb on + strand at 435.688 kb on + strand at 435.688 kb on + strand at 435.689 kb on - strand at 435.732 kb on + strand at 435.739 kb on + strand at 435.740 kb on - strand at 435.777 kb on - strand, within CA264_01865 at 435.788 kb on + strand, within CA264_01865 at 435.791 kb on - strand, within CA264_01865 at 436.120 kb on + strand, within CA264_01865 at 436.239 kb on + strand at 436.239 kb on + strand at 436.239 kb on + strand at 436.240 kb on - strand at 436.240 kb on - strand at 436.245 kb on + strand at 436.245 kb on + strand at 436.245 kb on + strand at 436.246 kb on - strand at 436.255 kb on + strand at 436.280 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 20 mM remove 433,475 - +0.5 433,478 - -0.4 433,478 - -0.6 433,478 - -0.4 433,482 + -0.0 433,483 - -0.1 433,485 - -0.8 433,485 - -0.1 433,485 - +0.1 433,530 - -0.6 433,530 - -0.6 433,620 - +0.7 433,623 + -0.5 433,633 + -0.5 433,634 - -0.8 433,675 - +1.9 433,689 - -0.1 433,759 - +1.0 433,768 - -0.2 433,797 + +1.2 433,798 - -0.9 433,813 + -0.6 433,886 + CA264_01855 0.21 -0.6 433,886 + CA264_01855 0.21 +0.6 433,886 + CA264_01855 0.21 +0.2 433,886 + CA264_01855 0.21 +0.6 433,886 + CA264_01855 0.21 +0.2 433,886 + CA264_01855 0.21 +0.1 434,033 - CA264_01855 0.44 -1.1 434,127 - CA264_01855 0.59 -0.1 434,219 + CA264_01855 0.74 -0.2 434,371 + -0.0 434,386 + +1.7 434,391 + -0.3 434,391 + +1.1 434,391 + +0.3 434,399 + +2.1 434,399 + -0.9 434,399 + -0.6 434,399 + -0.1 434,403 + -0.3 434,403 + +0.2 434,404 - -1.8 434,404 - -0.0 434,408 + +0.5 434,408 + -0.5 434,408 + +0.3 434,409 - -0.0 434,409 - +0.3 434,409 - -0.6 434,409 - +1.7 434,411 + +0.1 434,412 - -0.4 434,464 - +0.2 434,558 - CA264_01860 0.18 -0.1 434,603 + CA264_01860 0.23 +0.3 434,654 + CA264_01860 0.28 +0.3 434,654 + CA264_01860 0.28 -0.5 434,654 + CA264_01860 0.28 -0.9 434,681 + CA264_01860 0.31 +1.1 434,682 - CA264_01860 0.31 -0.2 434,682 - CA264_01860 0.31 -0.5 434,686 - CA264_01860 0.32 -0.8 434,867 + CA264_01860 0.52 -0.8 434,872 + CA264_01860 0.52 -0.4 434,872 + CA264_01860 0.52 -1.0 434,873 - CA264_01860 0.52 -0.4 434,873 - CA264_01860 0.52 +0.6 434,873 - CA264_01860 0.52 -0.8 434,948 + CA264_01860 0.61 +0.8 434,970 - CA264_01860 0.63 +0.3 435,029 - CA264_01860 0.70 -1.0 435,058 + CA264_01860 0.73 -0.3 435,073 + CA264_01860 0.75 +0.2 435,117 + CA264_01860 0.79 +0.2 435,127 + CA264_01860 0.80 -0.5 435,127 + CA264_01860 0.80 -0.8 435,127 + CA264_01860 0.80 -0.6 435,128 - CA264_01860 0.81 -1.1 435,129 + CA264_01860 0.81 -0.3 435,144 + CA264_01860 0.82 +0.7 435,153 + CA264_01860 0.83 -0.8 435,185 + CA264_01860 0.87 -0.5 435,186 - CA264_01860 0.87 -2.0 435,251 + -0.4 435,257 - -0.2 435,272 + -0.1 435,326 - -0.7 435,368 + -0.3 435,373 + -0.3 435,439 - +1.0 435,494 - +1.2 435,494 - +0.9 435,505 + -0.1 435,506 - -0.2 435,529 - -0.9 435,532 - -0.2 435,584 + -0.1 435,626 + -0.4 435,688 + -0.5 435,688 + +1.1 435,689 - -0.2 435,732 + +0.2 435,739 + +0.1 435,740 - -0.1 435,777 - CA264_01865 0.16 +0.0 435,788 + CA264_01865 0.18 +0.9 435,791 - CA264_01865 0.19 +0.2 436,120 + CA264_01865 0.80 +1.0 436,239 + +0.1 436,239 + +0.0 436,239 + -0.4 436,240 - -0.7 436,240 - +0.2 436,245 + -1.9 436,245 + -1.1 436,245 + -0.2 436,246 - -0.9 436,255 + -0.2 436,280 - +0.3
Or see this region's nucleotide sequence