Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS27685 and ABID97_RS27690 are separated by 16 nucleotides ABID97_RS27690 and ABID97_RS27695 are separated by 21 nucleotides
ABID97_RS27685: ABID97_RS27685 - L,D-transpeptidase family protein, at 456,287 to 457,303
_RS27685
ABID97_RS27690: ABID97_RS27690 - M23 family metallopeptidase, at 457,320 to 457,859
_RS27690
ABID97_RS27695: ABID97_RS27695 - phospholipase D-like domain-containing protein, at 457,881 to 459,149
_RS27695
Position (kb) 457
458 Strain fitness (log2 ratio) -1
0
1
2 at 456.563 kb on + strand, within ABID97_RS27685 at 456.564 kb on - strand, within ABID97_RS27685 at 456.656 kb on + strand, within ABID97_RS27685 at 456.657 kb on - strand, within ABID97_RS27685 at 456.657 kb on - strand, within ABID97_RS27685 at 457.056 kb on - strand, within ABID97_RS27685 at 457.650 kb on + strand, within ABID97_RS27690 at 457.650 kb on + strand, within ABID97_RS27690 at 458.154 kb on + strand, within ABID97_RS27695 at 458.154 kb on + strand, within ABID97_RS27695 at 458.154 kb on + strand, within ABID97_RS27695 at 458.155 kb on - strand, within ABID97_RS27695 at 458.155 kb on - strand, within ABID97_RS27695 at 458.160 kb on + strand, within ABID97_RS27695 at 458.160 kb on + strand, within ABID97_RS27695 at 458.161 kb on - strand, within ABID97_RS27695 at 458.161 kb on - strand, within ABID97_RS27695 at 458.338 kb on - strand, within ABID97_RS27695 at 458.338 kb on - strand, within ABID97_RS27695 at 458.712 kb on + strand, within ABID97_RS27695
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 456,563 + ABID97_RS27685 0.27 -0.5 456,564 - ABID97_RS27685 0.27 +0.1 456,656 + ABID97_RS27685 0.36 -0.0 456,657 - ABID97_RS27685 0.36 -0.1 456,657 - ABID97_RS27685 0.36 -0.1 457,056 - ABID97_RS27685 0.76 -0.7 457,650 + ABID97_RS27690 0.61 +2.7 457,650 + ABID97_RS27690 0.61 +0.4 458,154 + ABID97_RS27695 0.22 -0.2 458,154 + ABID97_RS27695 0.22 -0.7 458,154 + ABID97_RS27695 0.22 +0.8 458,155 - ABID97_RS27695 0.22 -0.7 458,155 - ABID97_RS27695 0.22 -0.2 458,160 + ABID97_RS27695 0.22 +0.7 458,160 + ABID97_RS27695 0.22 -0.9 458,161 - ABID97_RS27695 0.22 -0.6 458,161 - ABID97_RS27695 0.22 -0.5 458,338 - ABID97_RS27695 0.36 +0.0 458,338 - ABID97_RS27695 0.36 -0.3 458,712 + ABID97_RS27695 0.65 -0.0
Or see this region's nucleotide sequence