Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03035 and ABID97_RS03040 are separated by 43 nucleotides ABID97_RS03040 and ABID97_RS03045 are separated by 143 nucleotides ABID97_RS03045 and ABID97_RS03050 are separated by 16 nucleotides
ABID97_RS03035: ABID97_RS03035 - Bug family tripartite tricarboxylate transporter substrate binding protein, at 615,674 to 616,666
_RS03035
ABID97_RS03040: ABID97_RS03040 - 3-keto-5-aminohexanoate cleavage protein, at 616,710 to 617,633
_RS03040
ABID97_RS03045: ABID97_RS03045 - Crp/Fnr family transcriptional regulator, at 617,777 to 618,484
_RS03045
ABID97_RS03050: ABID97_RS03050 - 4-oxalocrotonate tautomerase family protein, at 618,501 to 618,725
_RS03050
Position (kb) 616
617
618 Strain fitness (log2 ratio) -1
0
1
2 at 615.885 kb on + strand, within ABID97_RS03035 at 615.885 kb on + strand, within ABID97_RS03035 at 615.885 kb on + strand, within ABID97_RS03035 at 615.886 kb on - strand, within ABID97_RS03035 at 615.886 kb on - strand, within ABID97_RS03035 at 616.185 kb on + strand, within ABID97_RS03035 at 616.329 kb on + strand, within ABID97_RS03035 at 616.329 kb on + strand, within ABID97_RS03035 at 616.329 kb on + strand, within ABID97_RS03035 at 616.344 kb on + strand, within ABID97_RS03035 at 616.344 kb on + strand, within ABID97_RS03035 at 616.345 kb on - strand, within ABID97_RS03035 at 616.345 kb on - strand, within ABID97_RS03035 at 616.557 kb on + strand, within ABID97_RS03035 at 616.557 kb on + strand, within ABID97_RS03035 at 616.560 kb on + strand, within ABID97_RS03035 at 616.560 kb on + strand, within ABID97_RS03035 at 616.560 kb on + strand, within ABID97_RS03035 at 616.560 kb on + strand, within ABID97_RS03035 at 616.560 kb on + strand, within ABID97_RS03035 at 616.560 kb on + strand, within ABID97_RS03035 at 616.561 kb on - strand, within ABID97_RS03035 at 616.561 kb on - strand, within ABID97_RS03035 at 616.870 kb on + strand, within ABID97_RS03040 at 616.871 kb on - strand, within ABID97_RS03040 at 616.871 kb on - strand, within ABID97_RS03040 at 617.074 kb on + strand, within ABID97_RS03040 at 617.074 kb on + strand, within ABID97_RS03040 at 617.074 kb on + strand, within ABID97_RS03040 at 617.075 kb on - strand, within ABID97_RS03040 at 617.075 kb on - strand, within ABID97_RS03040 at 617.075 kb on - strand, within ABID97_RS03040 at 617.674 kb on + strand at 617.675 kb on - strand at 618.230 kb on + strand, within ABID97_RS03045 at 618.230 kb on + strand, within ABID97_RS03045 at 618.230 kb on + strand, within ABID97_RS03045 at 618.230 kb on + strand, within ABID97_RS03045 at 618.230 kb on + strand, within ABID97_RS03045 at 618.231 kb on - strand, within ABID97_RS03045 at 618.231 kb on - strand, within ABID97_RS03045 at 618.231 kb on - strand, within ABID97_RS03045 at 618.432 kb on - strand at 618.432 kb on - strand at 618.432 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 615,885 + ABID97_RS03035 0.21 +0.1 615,885 + ABID97_RS03035 0.21 -1.5 615,885 + ABID97_RS03035 0.21 -0.4 615,886 - ABID97_RS03035 0.21 -0.5 615,886 - ABID97_RS03035 0.21 -0.1 616,185 + ABID97_RS03035 0.51 -0.5 616,329 + ABID97_RS03035 0.66 +0.9 616,329 + ABID97_RS03035 0.66 -0.1 616,329 + ABID97_RS03035 0.66 -0.6 616,344 + ABID97_RS03035 0.67 +0.3 616,344 + ABID97_RS03035 0.67 +0.0 616,345 - ABID97_RS03035 0.68 -0.1 616,345 - ABID97_RS03035 0.68 +1.3 616,557 + ABID97_RS03035 0.89 -1.1 616,557 + ABID97_RS03035 0.89 -0.2 616,560 + ABID97_RS03035 0.89 -1.1 616,560 + ABID97_RS03035 0.89 +0.3 616,560 + ABID97_RS03035 0.89 -0.7 616,560 + ABID97_RS03035 0.89 -0.9 616,560 + ABID97_RS03035 0.89 +0.3 616,560 + ABID97_RS03035 0.89 -1.2 616,561 - ABID97_RS03035 0.89 -1.0 616,561 - ABID97_RS03035 0.89 +0.3 616,870 + ABID97_RS03040 0.17 +0.2 616,871 - ABID97_RS03040 0.17 +1.0 616,871 - ABID97_RS03040 0.17 -0.5 617,074 + ABID97_RS03040 0.39 +0.9 617,074 + ABID97_RS03040 0.39 +0.5 617,074 + ABID97_RS03040 0.39 +0.2 617,075 - ABID97_RS03040 0.40 -0.3 617,075 - ABID97_RS03040 0.40 +0.7 617,075 - ABID97_RS03040 0.40 +0.4 617,674 + -0.6 617,675 - +0.2 618,230 + ABID97_RS03045 0.64 +0.6 618,230 + ABID97_RS03045 0.64 -0.8 618,230 + ABID97_RS03045 0.64 -0.5 618,230 + ABID97_RS03045 0.64 +1.1 618,230 + ABID97_RS03045 0.64 +0.1 618,231 - ABID97_RS03045 0.64 -0.5 618,231 - ABID97_RS03045 0.64 -0.1 618,231 - ABID97_RS03045 0.64 +0.0 618,432 - -0.6 618,432 - +0.5 618,432 - +2.2
Or see this region's nucleotide sequence