Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4195

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
4,704,840	+				+0.2
4,704,840	+				-0.1
4,704,841	-				-0.3
4,704,861	+				+1.2
4,704,894	+				+0.5
4,704,894	+				-0.4
4,704,894	+				+0.3
4,704,894	+				+1.1
4,704,895	-				-0.3
4,704,895	-				+0.7
4,704,895	-				-0.9
4,704,934	+				+0.4
4,704,935	-				+0.9
4,705,214	-		PfGW456L13_4194	0.42	+0.9
4,705,465	+		PfGW456L13_4194	0.81	+0.4
4,705,466	-		PfGW456L13_4194	0.81	+2.1
4,705,466	-		PfGW456L13_4194	0.81	-0.3
4,705,466	-		PfGW456L13_4194	0.81	+0.7
4,705,754	+				+0.2
4,705,754	+				+0.5
4,705,759	+				-0.4
4,705,760	-				+0.5
4,705,760	-				+0.4
4,705,760	-				+0.1
4,705,786	+				-0.5
4,705,786	+				-1.3
4,705,786	+				+0.7
4,705,787	-				+1.0
4,705,787	-				-0.3
4,705,948	+		PfGW456L13_4195	0.12	-1.0
4,705,948	+		PfGW456L13_4195	0.12	-0.4
4,705,948	+		PfGW456L13_4195	0.12	+1.2
4,705,948	+		PfGW456L13_4195	0.12	+0.4
4,705,948	+		PfGW456L13_4195	0.12	-0.4
4,705,948	+		PfGW456L13_4195	0.12	+0.0
4,705,948	+		PfGW456L13_4195	0.12	-1.3
4,705,948	+		PfGW456L13_4195	0.12	+0.6
4,705,949	-		PfGW456L13_4195	0.12	+0.4
4,705,949	-		PfGW456L13_4195	0.12	-0.4
4,705,949	-		PfGW456L13_4195	0.12	-0.5
4,705,949	-		PfGW456L13_4195	0.12	-0.2
4,705,949	-		PfGW456L13_4195	0.12	-0.7
4,705,949	-		PfGW456L13_4195	0.12	-0.4
4,705,949	-		PfGW456L13_4195	0.12	+1.2
4,706,117	-		PfGW456L13_4195	0.25	-0.3
4,706,434	+		PfGW456L13_4195	0.50	-0.8
4,706,435	-		PfGW456L13_4195	0.50	-0.4
4,706,515	+		PfGW456L13_4195	0.56	+0.0
4,706,516	-		PfGW456L13_4195	0.56	+0.7
4,706,516	-		PfGW456L13_4195	0.56	+0.1
4,706,675	+		PfGW456L13_4195	0.68	+0.0
4,706,737	+		PfGW456L13_4195	0.73	-0.4
4,706,737	+		PfGW456L13_4195	0.73	+0.0
4,706,737	+		PfGW456L13_4195	0.73	-0.5
4,706,738	-		PfGW456L13_4195	0.73	+1.2
4,706,738	-		PfGW456L13_4195	0.73	-1.4
4,706,738	-		PfGW456L13_4195	0.73	-0.1
4,706,891	+		PfGW456L13_4195	0.85	-0.2
4,707,058	+				+1.1
4,707,058	+				-0.0
4,707,058	+				+0.6
4,707,058	+				+0.1
4,707,059	-				+0.3
4,707,059	-				-0.5
4,707,059	-				-0.8
4,707,091	+				+0.2
4,707,092	-				+0.8
4,707,092	-				+0.2
4,707,098	+				-1.6
4,707,099	-				-0.3
4,707,133	+				+0.8
4,707,193	-		PfGW456L13_4196	0.24	-0.5
4,707,193	-		PfGW456L13_4196	0.24	+1.1
4,707,232	+		PfGW456L13_4196	0.36	-0.7
4,707,233	-		PfGW456L13_4196	0.37	-0.2
4,707,270	+		PfGW456L13_4196	0.48	-0.2
4,707,271	-		PfGW456L13_4196	0.49	+0.7
4,707,271	-		PfGW456L13_4196	0.49	+0.3
4,707,430	+				+0.4
4,707,431	-				-0.7
4,707,471	+				-0.3
4,707,471	+				+0.3
4,707,471	+				-0.0
4,707,471	+				+0.5
4,707,471	+				-0.3
4,707,472	-				-1.7
4,707,509	+				+0.2
4,707,510	-				-1.6
4,707,540	+				-1.4
4,707,541	-				-1.4
4,707,541	-				-0.7
4,707,780	-		PfGW456L13_4197	0.11	-1.3
4,707,780	-		PfGW456L13_4197	0.11	-0.6