Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2688

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
2,986,730	-		PfGW456L13_2687	0.40	+0.0
2,986,730	-		PfGW456L13_2687	0.40	-0.5
2,987,123	-		PfGW456L13_2687	0.66	-0.7
2,987,123	-		PfGW456L13_2687	0.66	+1.2
2,987,452	-		PfGW456L13_2687	0.88	+0.6
2,987,452	-		PfGW456L13_2687	0.88	+0.1
2,987,515	+				+0.8
2,987,516	-				+0.0
2,987,663	+				+0.5
2,987,663	+				+0.3
2,987,663	+				+0.5
2,987,663	+				+0.4
2,987,663	+				+0.4
2,987,664	-				-0.5
2,987,892	+		PfGW456L13_2688	0.21	+0.0
2,987,892	+		PfGW456L13_2688	0.21	-0.2
2,987,893	-		PfGW456L13_2688	0.21	+1.2
2,987,960	-		PfGW456L13_2688	0.29	+1.4
2,987,979	+		PfGW456L13_2688	0.31	-0.2
2,987,979	+		PfGW456L13_2688	0.31	-0.7
2,987,980	-		PfGW456L13_2688	0.31	-0.2
2,987,980	-		PfGW456L13_2688	0.31	-0.7
2,987,980	-		PfGW456L13_2688	0.31	+0.3
2,987,980	-		PfGW456L13_2688	0.31	+0.0
2,987,991	+		PfGW456L13_2688	0.32	+0.0
2,987,991	+				-0.4
2,987,991	+		PfGW456L13_2688	0.32	-0.1
2,987,992	-		PfGW456L13_2688	0.32	+0.3
2,987,992	-		PfGW456L13_2688	0.32	+0.2
2,988,084	+		PfGW456L13_2688	0.42	-1.4
2,988,084	+		PfGW456L13_2688	0.42	+0.2
2,988,084	+		PfGW456L13_2688	0.42	+0.2
2,988,084	+		PfGW456L13_2688	0.42	-1.1
2,988,084	+		PfGW456L13_2688	0.42	-1.0
2,988,085	-		PfGW456L13_2688	0.42	+0.3
2,988,085	-		PfGW456L13_2688	0.42	+0.1
2,988,085	-		PfGW456L13_2688	0.42	+0.2
2,988,085	-		PfGW456L13_2688	0.42	-0.7
2,988,085	-		PfGW456L13_2688	0.42	+1.0
2,988,105	+		PfGW456L13_2688	0.44	-2.0
2,988,106	-		PfGW456L13_2688	0.44	+1.0
2,988,213	+		PfGW456L13_2688	0.56	-1.2
2,988,213	+		PfGW456L13_2688	0.56	+0.5
2,988,214	-		PfGW456L13_2688	0.56	-1.0
2,988,227	+		PfGW456L13_2688	0.58	-0.7
2,988,227	+		PfGW456L13_2688	0.58	-0.2
2,988,227	+		PfGW456L13_2688	0.58	-0.2
2,988,227	+		PfGW456L13_2688	0.58	-0.2
2,988,227	+		PfGW456L13_2688	0.58	-0.3
2,988,227	+		PfGW456L13_2688	0.58	-2.2
2,988,228	-		PfGW456L13_2688	0.58	+0.4
2,988,653	-				-2.4
2,988,658	+				+0.3
2,988,659	-				-1.9
2,988,699	+				-0.2
2,988,700	-				+0.9
2,988,700	-				-1.0
2,988,760	+				-0.1
2,989,014	+		PfGW456L13_2689	0.25	+0.8
2,989,014	+		PfGW456L13_2689	0.25	+0.1
2,989,014	+		PfGW456L13_2689	0.25	+0.8
2,989,015	-		PfGW456L13_2689	0.25	+1.0
2,989,015	-		PfGW456L13_2689	0.25	+0.6
2,989,082	+		PfGW456L13_2689	0.32	+0.0
2,989,270	-		PfGW456L13_2689	0.50	+2.3
2,989,372	-		PfGW456L13_2689	0.61	+1.9
2,989,372	-		PfGW456L13_2689	0.61	+0.9
2,989,473	+		PfGW456L13_2689	0.71	-2.2
2,989,473	+		PfGW456L13_2689	0.71	+0.7
2,989,474	-		PfGW456L13_2689	0.71	+1.2
2,989,474	-		PfGW456L13_2689	0.71	-0.2
2,989,476	+		PfGW456L13_2689	0.71	-0.7
2,989,476	+		PfGW456L13_2689	0.71	+1.2
2,989,476	+		PfGW456L13_2689	0.71	+0.5
2,989,476	+		PfGW456L13_2689	0.71	-1.1
2,989,476	+		PfGW456L13_2689	0.71	+0.7
2,989,476	+		PfGW456L13_2689	0.71	+0.3
2,989,476	+		PfGW456L13_2689	0.71	+0.2
2,989,476	+		PfGW456L13_2689	0.71	-0.3
2,989,476	+		PfGW456L13_2689	0.71	+2.0
2,989,477	-		PfGW456L13_2689	0.71	+0.9
2,989,477	-		PfGW456L13_2689	0.71	+0.8
2,989,477	-		PfGW456L13_2689	0.71	-0.0
2,989,477	-		PfGW456L13_2689	0.71	+0.3
2,989,477	-		PfGW456L13_2689	0.71	-0.1
2,989,477	-		PfGW456L13_2689	0.71	-0.4
2,989,477	-		PfGW456L13_2689	0.71	-0.6
2,989,477	-		PfGW456L13_2689	0.71	-0.1
2,989,477	-		PfGW456L13_2689	0.71	+1.3
2,989,554	+		PfGW456L13_2689	0.79	+0.6
2,989,557	+		PfGW456L13_2689	0.79	+0.2
2,989,557	+		PfGW456L13_2689	0.79	+1.0
2,989,557	+		PfGW456L13_2689	0.79	+0.4