Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2019

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
2,222,090	+		PfGW456L13_2017	0.85	-1.7
2,222,090	+		PfGW456L13_2017	0.85	+0.3
2,222,090	+		PfGW456L13_2017	0.85	-0.5
2,222,169	+				-1.6
2,222,193	+				+0.7
2,222,194	-				-0.2
2,222,394	-				-0.8
2,222,427	+				+0.7
2,222,427	+				+0.1
2,222,427	+				-0.8
2,222,427	+				+1.1
2,222,427	+				-0.4
2,222,427	+				+0.8
2,222,427	+				-0.5
2,222,427	+				+1.2
2,222,428	-				-1.9
2,222,428	-				-0.1
2,222,428	-				+0.7
2,222,428	-				-1.5
2,222,450	+		PfGW456L13_2018	0.12	+0.4
2,222,450	+		PfGW456L13_2018	0.12	+0.3
2,222,451	-		PfGW456L13_2018	0.12	-0.2
2,222,525	+		PfGW456L13_2018	0.27	+0.1
2,222,525	+		PfGW456L13_2018	0.27	-0.8
2,222,525	+		PfGW456L13_2018	0.27	+0.6
2,222,525	+		PfGW456L13_2018	0.27	+0.4
2,222,525	+		PfGW456L13_2018	0.27	+0.5
2,222,525	+		PfGW456L13_2018	0.27	+1.5
2,222,525	+		PfGW456L13_2018	0.27	+0.2
2,222,526	-		PfGW456L13_2018	0.27	-0.8
2,222,526	-		PfGW456L13_2018	0.27	-0.1
2,222,526	-		PfGW456L13_2018	0.27	-0.1
2,222,526	-		PfGW456L13_2018	0.27	-1.0
2,222,526	-		PfGW456L13_2018	0.27	+1.5
2,222,526	-		PfGW456L13_2018	0.27	+0.1
2,222,526	-		PfGW456L13_2018	0.27	-0.7
2,222,526	-		PfGW456L13_2018	0.27	-0.1
2,222,526	-		PfGW456L13_2018	0.27	+0.3
2,222,531	+		PfGW456L13_2018	0.28	-0.1
2,222,531	+		PfGW456L13_2018	0.28	-0.5
2,222,532	-		PfGW456L13_2018	0.28	-0.6
2,222,532	-		PfGW456L13_2018	0.28	-0.2
2,222,561	+		PfGW456L13_2018	0.34	+0.3
2,222,561	+		PfGW456L13_2018	0.34	+0.1
2,222,561	+		PfGW456L13_2018	0.34	+0.2
2,222,561	+		PfGW456L13_2018	0.34	+0.3
2,222,561	+		PfGW456L13_2018	0.34	-0.3
2,222,561	+		PfGW456L13_2018	0.34	+0.5
2,222,561	+		PfGW456L13_2018	0.34	-0.4
2,222,562	-		PfGW456L13_2018	0.34	+0.5
2,222,562	-		PfGW456L13_2018	0.34	+0.5
2,222,562	-		PfGW456L13_2018	0.34	+1.2
2,222,562	-		PfGW456L13_2018	0.34	+0.4
2,222,562	-		PfGW456L13_2018	0.34	-0.2
2,222,562	-		PfGW456L13_2018	0.34	+0.5
2,222,562	-		PfGW456L13_2018	0.34	-2.3
2,222,562	-		PfGW456L13_2018	0.34	-2.1
2,222,562	-		PfGW456L13_2018	0.34	-0.3
2,222,591	+		PfGW456L13_2018	0.40	+1.3
2,222,591	+		PfGW456L13_2018	0.40	+0.3
2,222,591	+		PfGW456L13_2018	0.40	-0.3
2,222,591	+		PfGW456L13_2018	0.40	+0.6
2,222,592	-		PfGW456L13_2018	0.40	+0.5
2,222,592	-		PfGW456L13_2018	0.40	+1.0
2,222,592	-		PfGW456L13_2018	0.40	-0.6
2,222,713	-		PfGW456L13_2018	0.65	+0.0
2,222,843	-				+0.5
2,222,869	-				+0.1
2,222,914	+				+0.1
2,223,054	+				-0.6
2,223,054	+				-0.6
2,223,054	+				+0.2
2,223,054	+				-0.1
2,223,055	-				+1.4
2,223,086	+				+0.7
2,223,086	+				-0.6
2,223,086	+				+0.3
2,223,086	+				-0.3
2,223,087	-				+0.5
2,223,087	-				-1.1
2,223,087	-				+0.9
2,223,087	-				+0.6
2,223,087	-				-0.2
2,223,087	-				-0.2
2,223,087	-				+0.2
2,223,198	+		PfGW456L13_2019	0.26	+1.2
2,223,198	+		PfGW456L13_2019	0.26	-0.8
2,223,198	+		PfGW456L13_2019	0.26	+0.2
2,223,198	+		PfGW456L13_2019	0.26	+0.2
2,223,198	+		PfGW456L13_2019	0.26	-0.1
2,223,198	+		PfGW456L13_2019	0.26	+0.2
2,223,198	+		PfGW456L13_2019	0.26	+0.0
2,223,198	+		PfGW456L13_2019	0.26	+0.4
2,223,198	+		PfGW456L13_2019	0.26	-1.3
2,223,198	+		PfGW456L13_2019	0.26	+0.3
2,223,198	+		PfGW456L13_2019	0.26	-0.3
2,223,199	-		PfGW456L13_2019	0.26	+0.2
2,223,199	-		PfGW456L13_2019	0.26	-0.1
2,223,199	-		PfGW456L13_2019	0.26	-0.9
2,223,199	-		PfGW456L13_2019	0.26	+0.7
2,223,199	-		PfGW456L13_2019	0.26	-0.1
2,223,207	+		PfGW456L13_2019	0.27	-1.1
2,223,207	+		PfGW456L13_2019	0.27	-0.5
2,223,207	+		PfGW456L13_2019	0.27	+0.4
2,223,208	-		PfGW456L13_2019	0.27	+1.4
2,223,208	-		PfGW456L13_2019	0.27	+1.2
2,223,208	-		PfGW456L13_2019	0.27	-0.1
2,223,208	-		PfGW456L13_2019	0.27	-0.1
2,223,216	+		PfGW456L13_2019	0.29	-0.6
2,223,217	-		PfGW456L13_2019	0.29	+0.1
2,223,217	-		PfGW456L13_2019	0.29	+0.3
2,223,264	+		PfGW456L13_2019	0.36	-0.5
2,223,298	+		PfGW456L13_2019	0.42	-0.7
2,223,298	+		PfGW456L13_2019	0.42	+0.3
2,223,306	+		PfGW456L13_2019	0.43	+0.2
2,223,306	+		PfGW456L13_2019	0.43	+0.4
2,223,306	+		PfGW456L13_2019	0.43	+0.5
2,223,306	+		PfGW456L13_2019	0.43	+0.4
2,223,306	+		PfGW456L13_2019	0.43	+0.2
2,223,306	+		PfGW456L13_2019	0.43	+0.3
2,223,306	+		PfGW456L13_2019	0.43	+0.2
2,223,306	+		PfGW456L13_2019	0.43	-0.4
2,223,307	-		PfGW456L13_2019	0.44	-0.5
2,223,307	-		PfGW456L13_2019	0.44	-0.3
2,223,307	-		PfGW456L13_2019	0.44	+0.9
2,223,307	-		PfGW456L13_2019	0.44	-0.4
2,223,351	+		PfGW456L13_2019	0.51	+0.3
2,223,351	+		PfGW456L13_2019	0.51	+0.7
2,223,351	+		PfGW456L13_2019	0.51	+1.2
2,223,351	+		PfGW456L13_2019	0.51	-0.4
2,223,351	+		PfGW456L13_2019	0.51	-0.3
2,223,352	-		PfGW456L13_2019	0.51	+0.8
2,223,352	-		PfGW456L13_2019	0.51	+0.5
2,223,352	-		PfGW456L13_2019	0.51	+0.3
2,223,352	-		PfGW456L13_2019	0.51	-0.7
2,223,352	-		PfGW456L13_2019	0.51	-0.4
2,223,352	-		PfGW456L13_2019	0.51	-0.2
2,223,352	-		PfGW456L13_2019	0.51	+0.1
2,223,352	-		PfGW456L13_2019	0.51	-0.6
2,223,414	+		PfGW456L13_2019	0.61	-0.0
2,223,415	-		PfGW456L13_2019	0.62	+0.0
2,223,447	-		PfGW456L13_2019	0.67	-0.4
2,223,459	-		PfGW456L13_2019	0.69	-0.0
2,223,459	-		PfGW456L13_2019	0.69	-0.7
2,223,505	+		PfGW456L13_2019	0.76	+0.5
2,223,506	-		PfGW456L13_2019	0.77	+1.5
2,223,545	-		PfGW456L13_2019	0.83	-0.6
2,223,555	+		PfGW456L13_2019	0.85	+0.5
2,223,555	+		PfGW456L13_2019	0.85	+0.2
2,223,555	+		PfGW456L13_2019	0.85	-1.7
2,223,555	+		PfGW456L13_2019	0.85	-0.5
2,223,555	+		PfGW456L13_2019	0.85	-0.7
2,223,555	+		PfGW456L13_2019	0.85	+0.6
2,223,555	+		PfGW456L13_2019	0.85	+1.1
2,223,556	-		PfGW456L13_2019	0.85	-0.4
2,223,556	-		PfGW456L13_2019	0.85	-0.6
2,223,556	-		PfGW456L13_2019	0.85	+0.3
2,223,556	-		PfGW456L13_2019	0.85	-0.3
2,223,556	-		PfGW456L13_2019	0.85	+1.2
2,223,632	+				+0.6
2,223,632	+				+0.0
2,223,632	+				+0.7
2,223,632	+				-0.9
2,223,632	+				-0.2
2,223,632	+				-0.7
2,223,633	-				+1.2
2,223,633	-				+0.0
2,223,633	-				-0.3
2,223,633	-				+0.2
2,223,720	+				+0.0
2,223,720	+				-0.3
2,223,720	+				+1.1
2,223,720	+				-0.3
2,223,720	+				+0.3
2,223,720	+				-1.6
2,223,720	+				-0.1
2,223,720	+				+0.9
2,223,721	-				+0.6
2,223,721	-				-0.6
2,223,721	-				+0.4
2,223,721	-				+0.2
2,223,721	-				+0.2
2,223,721	-				+0.3
2,223,734	+				-0.3
2,223,734	+				-0.3
2,223,735	-				+0.9
2,223,735	-				-0.2
2,223,744	+				+0.3
2,223,744	+				-0.5
2,223,744	+				+0.8
2,223,745	-				-1.0
2,223,745	-				-0.1
2,223,745	-				-0.6
2,223,745	-				-0.6
2,223,754	+				-0.2
2,223,754	+				+0.3
2,223,754	+				-0.1
2,223,756	+				+0.1
2,223,756	+				+0.2
2,223,756	+				+0.0
2,223,757	-				+0.5
2,223,781	+				-0.5
2,223,790	+				-0.2
2,223,808	-				-0.9
2,223,888	+				+0.4
2,224,064	+		PfGW456L13_2020	0.16	+0.6
2,224,064	+		PfGW456L13_2020	0.16	-0.6
2,224,064	+		PfGW456L13_2020	0.16	-1.1
2,224,064	+		PfGW456L13_2020	0.16	-0.7
2,224,064	+		PfGW456L13_2020	0.16	-0.7
2,224,064	+		PfGW456L13_2020	0.16	-1.0
2,224,064	+		PfGW456L13_2020	0.16	+0.7
2,224,064	+		PfGW456L13_2020	0.16	-0.7
2,224,064	+		PfGW456L13_2020	0.16	-1.2
2,224,064	+		PfGW456L13_2020	0.16	-0.3
2,224,064	+		PfGW456L13_2020	0.16	-1.5
2,224,064	+		PfGW456L13_2020	0.16	-0.2
2,224,064	+		PfGW456L13_2020	0.16	-0.0
2,224,065	-		PfGW456L13_2020	0.16	-0.5
2,224,065	-		PfGW456L13_2020	0.16	-0.5
2,224,065	-		PfGW456L13_2020	0.16	-0.2
2,224,065	-		PfGW456L13_2020	0.16	-0.7
2,224,065	-		PfGW456L13_2020	0.16	-1.5
2,224,065	-		PfGW456L13_2020	0.16	+0.3
2,224,065	-		PfGW456L13_2020	0.16	+0.2
2,224,065	-		PfGW456L13_2020	0.16	-1.1
2,224,065	-		PfGW456L13_2020	0.16	-0.6
2,224,065	-		PfGW456L13_2020	0.16	-0.6
2,224,065	-		PfGW456L13_2020	0.16	-0.2
2,224,065	-		PfGW456L13_2020	0.16	-0.5
2,224,065	-		PfGW456L13_2020	0.16	-0.1
2,224,065	-		PfGW456L13_2020	0.16	-0.1
2,224,065	-		PfGW456L13_2020	0.16	-0.4
2,224,066	+		PfGW456L13_2020	0.17	-0.2
2,224,066	+		PfGW456L13_2020	0.17	-0.5
2,224,066	+		PfGW456L13_2020	0.17	-1.9
2,224,066	+		PfGW456L13_2020	0.17	-0.8
2,224,066	+		PfGW456L13_2020	0.17	-1.5
2,224,067	-		PfGW456L13_2020	0.17	-1.1
2,224,067	-		PfGW456L13_2020	0.17	+0.1
2,224,067	-		PfGW456L13_2020	0.17	-0.5
2,224,067	-		PfGW456L13_2020	0.17	-0.1
2,224,067	-		PfGW456L13_2020	0.17	+0.3
2,224,067	-		PfGW456L13_2020	0.17	-0.5
2,224,067	-		PfGW456L13_2020	0.17	-0.7
2,224,181	+		PfGW456L13_2020	0.31	-0.8
2,224,205	+		PfGW456L13_2020	0.33	-0.3
2,224,205	+		PfGW456L13_2020	0.33	+0.3
2,224,229	+		PfGW456L13_2020	0.36	+0.9
2,224,230	-		PfGW456L13_2020	0.36	-0.6
2,224,230	-		PfGW456L13_2020	0.36	-1.1
2,224,230	-		PfGW456L13_2020	0.36	+0.0
2,224,230	-		PfGW456L13_2020	0.36	-0.6
2,224,308	-		PfGW456L13_2020	0.46	-0.7
2,224,308	-		PfGW456L13_2020	0.46	-0.2
2,224,450	+		PfGW456L13_2020	0.63	+0.4
2,224,450	+		PfGW456L13_2020	0.63	-1.4
2,224,451	-		PfGW456L13_2020	0.63	+0.3
2,224,451	-		PfGW456L13_2020	0.63	-0.5
2,224,451	-		PfGW456L13_2020	0.63	-1.0
2,224,451	-		PfGW456L13_2020	0.63	-1.5
2,224,476	-		PfGW456L13_2020	0.66	-0.3
2,224,502	+		PfGW456L13_2020	0.69	-0.5