Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS21745

Experiment: succinate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C); with MOPS
4,895,298	+				-1.2
4,895,298	+				-0.3
4,895,298	+				-0.2
4,895,298	+				+0.7
4,895,298	+				-1.5
4,895,298	+				+0.9
4,895,298	+				-0.4
4,895,298	+				-1.3
4,895,299	-				-2.3
4,895,299	-				-0.5
4,895,299	-				+0.5
4,895,302	+				+0.4
4,895,302	+				-0.5
4,895,302	+				+1.0
4,895,302	+				-0.0
4,895,302	+				-0.6
4,895,302	+				+0.1
4,895,302	+				-0.3
4,895,302	+				-0.5
4,895,302	+				+1.7
4,895,302	+				+1.1
4,895,302	+				-0.2
4,895,302	+				-0.6
4,895,302	+				-0.6
4,895,302	+				+1.1
4,895,303	-				-2.3
4,895,303	-				-1.1
4,895,303	-				-1.6
4,895,303	-				+0.1
4,895,303	-				+0.1
4,895,303	-				-0.8
4,895,303	-				-0.1
4,895,303	-				-1.5
4,895,303	-				-0.1
4,895,303	-				+0.7
4,895,303	-				-1.2
4,895,337	+				+0.5
4,895,337	+				-1.2
4,895,337	+				-2.0
4,895,338	-				+0.3
4,895,338	-				-0.4
4,895,338	-				+1.1
4,895,341	+				+1.5
4,895,342	-				-1.0
4,895,347	+				+0.0
4,895,347	+				-1.1
4,895,348	-				-0.8
4,895,378	-				-0.1
4,895,383	+				+1.6
4,895,384	-				-1.6
4,895,473	+				+0.5
4,895,473	+				+0.4
4,895,473	+				-1.0
4,895,473	+				-0.9
4,895,473	+				-2.3
4,895,473	+				-0.6
4,895,474	-				-0.1
4,895,474	-				+2.4
4,895,474	-				-0.5
4,895,474	-				-0.3
4,895,474	-				-1.0
4,895,474	-				+0.3
4,895,474	-				-0.9
4,895,474	-				+0.7
4,895,474	-				+0.1
4,895,486	-				+1.3
4,895,486	-				-0.9
4,895,486	-				+0.5
4,895,486	-				+1.0
4,895,489	+				+0.5
4,895,489	+				-1.6
4,895,489	+				-0.4
4,895,489	+				+0.8
4,895,489	+				+1.2
4,895,489	+				+0.3
4,895,490	-				+0.3
4,895,490	-				-0.0
4,895,490	-				-0.4
4,895,490	-				-0.5
4,895,526	+				+0.1
4,895,526	+				-1.3
4,895,527	-				-1.3
4,895,527	-				+0.2
4,895,544	-				-1.2
4,895,544	-				-1.7
4,895,544	-				+0.5
4,895,544	-				+0.7
4,895,547	-				+0.1
4,895,547	-				+1.2
4,895,547	-				+0.1
4,895,547	-				-0.9
4,895,547	-				+0.8
4,895,547	-				+0.3
4,895,547	-				+2.2
4,895,547	-				-1.3
4,895,547	-				-0.4
4,895,547	-				+0.1
4,895,596	+				+1.0
4,895,612	+				-1.0
4,895,612	+				-0.3
4,895,612	+				-0.9
4,895,612	+				-0.1
4,895,645	+				-0.8
4,895,645	+				+0.3
4,895,645	+				-0.8
4,895,645	+				+0.5
4,895,646	-				-1.6
4,895,660	+				+0.3
4,895,660	+				+0.5
4,895,661	-				-0.5
4,895,661	-				+0.1
4,895,686	+				-0.3
4,895,686	+				-0.6
4,895,687	-				-0.5
4,895,687	-				+0.3
4,895,690	+				-2.2
4,895,690	+				+1.5
4,895,690	+				-1.2
4,895,690	+				+0.5
4,895,690	+				-0.6
4,895,690	+				-0.0
4,895,690	+				-0.0
4,895,690	+				+1.5
4,895,690	+				-2.0
4,895,690	+				-0.1
4,895,690	+				+0.7
4,895,690	+				-1.5
4,895,690	+				-0.4
4,895,690	+				+1.0
4,895,690	+				-0.9
4,895,690	+				+1.3
4,895,690	+				-0.5
4,895,690	+				-1.2
4,895,690	+				-2.1
4,895,690	+				+0.6
4,895,690	+				-0.2
4,895,690	+				-1.4
4,895,690	+				-1.2
4,895,690	+				-1.3
4,895,690	+				-1.5
4,895,690	+				-1.0
4,895,690	+				+0.4
4,895,690	+				-0.2
4,895,690	+				-0.5
4,895,690	+				+1.7
4,895,690	+				+0.3
4,895,690	+				-0.2
4,895,690	+				+0.1
4,895,690	+				-0.1
4,895,690	+				-0.1
4,895,690	+				-0.5
4,895,690	+				-0.8
4,895,690	+				+1.7
4,895,690	+				-0.2
4,895,691	-				+0.7
4,895,691	-				-0.4
4,895,691	-				-0.1
4,895,691	-				-0.6
4,895,691	-				-0.6
4,895,691	-				+0.0
4,895,691	-				-1.3
4,895,691	-				-2.8
4,895,691	-				+0.8
4,895,691	-				-0.1
4,895,691	-				+0.9
4,895,691	-				-0.0
4,895,691	-				+1.7
4,895,691	-				-1.9
4,895,691	-				-0.7
4,895,691	-				+0.2
4,895,691	-				+0.1
4,895,691	-				-0.2
4,895,691	-				-0.4
4,895,691	-				+0.8
4,895,691	-				-0.0
4,895,691	-				+1.9
4,895,691	-				-1.5
4,895,691	-				+0.4
4,895,691	-				+1.1
4,895,691	-				+0.9
4,895,691	-				+1.1
4,895,691	-				+0.1
4,895,691	-				+1.0
4,895,691	-				+0.1
4,895,691	-				-1.4
4,895,691	-				+0.7
4,895,691	-				-1.1
4,895,691	-				+0.5
4,895,691	-				-1.3
4,895,691	-				-0.9
4,895,691	-				-0.3
4,895,691	-				+0.5
4,895,691	-				-0.8
4,895,691	-				-0.4
4,895,691	-				+1.1
4,895,691	-				+0.4
4,895,691	-				-2.5
4,895,691	-				-2.2
4,895,691	-				+0.4
4,895,691	-				-2.0
4,895,691	-				+0.1
4,895,735	+				-0.6
4,895,735	+				+0.7
4,895,735	+				-0.3
4,895,735	+				-0.6
4,895,735	+				-0.6
4,895,735	+				+0.1
4,895,736	-				+0.4
4,895,736	-				+1.5
4,895,736	-				+0.4
4,895,736	-				-0.9
4,895,736	-				+0.2
4,895,736	-				+0.6
4,895,736	-				-0.9
4,895,892	+		PFLU_RS21740	0.53	-0.3
4,895,892	+		PFLU_RS21740	0.53	-0.2
4,895,892	+		PFLU_RS21740	0.53	+0.2
4,895,892	+		PFLU_RS21740	0.53	-0.1
4,895,892	+		PFLU_RS21740	0.53	-1.3
4,895,892	+		PFLU_RS21740	0.53	+0.2
4,895,892	+		PFLU_RS21740	0.53	+1.9
4,895,892	+		PFLU_RS21740	0.53	+0.8
4,895,892	+		PFLU_RS21740	0.53	-1.1
4,895,892	+		PFLU_RS21740	0.53	-0.6
4,895,892	+		PFLU_RS21740	0.53	+0.1
4,895,892	+		PFLU_RS21740	0.53	-0.2
4,895,892	+		PFLU_RS21740	0.53	+0.7
4,895,892	+		PFLU_RS21740	0.53	+1.5
4,895,892	+		PFLU_RS21740	0.53	+0.4
4,895,892	+		PFLU_RS21740	0.53	-0.2
4,895,892	+		PFLU_RS21740	0.53	-1.1
4,895,892	+		PFLU_RS21740	0.53	+0.6
4,895,892	+		PFLU_RS21740	0.53	+0.1
4,895,893	-		PFLU_RS21740	0.53	+1.3
4,895,893	-		PFLU_RS21740	0.53	+0.9
4,895,893	-		PFLU_RS21740	0.53	+0.5
4,895,893	-		PFLU_RS21740	0.53	-1.1
4,895,893	-		PFLU_RS21740	0.53	+0.5
4,895,893	-		PFLU_RS21740	0.53	-0.8
4,895,893	-		PFLU_RS21740	0.53	-2.3
4,895,893	-		PFLU_RS21740	0.53	+0.0
4,895,893	-		PFLU_RS21740	0.53	-2.2
4,895,893	-		PFLU_RS21740	0.53	-0.2
4,895,893	-		PFLU_RS21740	0.53	-0.3
4,895,893	-		PFLU_RS21740	0.53	+1.0
4,895,934	+		PFLU_RS21740	0.65	+0.4
4,895,934	+		PFLU_RS21740	0.65	+0.6
4,896,046	+				-1.5
4,896,046	+				-1.0
4,896,046	+				+0.4
4,896,046	+				+1.7
4,896,046	+				+0.6
4,896,047	-				-2.3
4,896,047	-				+0.5
4,896,047	-				-0.6
4,896,047	-				+0.1
4,896,047	-				-1.5
4,896,047	-				-1.6
4,896,047	-				-0.6
4,896,047	-				-0.1
4,896,047	-				-1.3
4,896,047	-				-0.2
4,896,047	-				-0.6
4,896,090	-				+0.3
4,896,090	-				+0.3
4,896,090	-				+0.6
4,896,148	+				+1.0
4,896,148	+				-0.4
4,896,148	+				-0.8
4,896,148	+				+0.7
4,896,149	-				-2.0
4,896,149	-				+0.6
4,896,149	-				-1.2
4,896,316	+		PFLU_RS21745	0.13	+0.4
4,896,316	+		PFLU_RS21745	0.13	-0.2
4,896,316	+		PFLU_RS21745	0.13	+0.3
4,896,316	+		PFLU_RS21745	0.13	+0.6
4,896,316	+		PFLU_RS21745	0.13	+0.5
4,896,316	+		PFLU_RS21745	0.13	-0.3
4,896,316	+		PFLU_RS21745	0.13	-1.1
4,896,316	+		PFLU_RS21745	0.13	-0.8
4,896,316	+		PFLU_RS21745	0.13	+0.5
4,896,316	+		PFLU_RS21745	0.13	+0.3
4,896,316	+		PFLU_RS21745	0.13	-1.0
4,896,316	+		PFLU_RS21745	0.13	+0.6
4,896,316	+		PFLU_RS21745	0.13	-2.4
4,896,316	+		PFLU_RS21745	0.13	-1.6
4,896,316	+		PFLU_RS21745	0.13	+0.8
4,896,316	+		PFLU_RS21745	0.13	-2.6
4,896,316	+		PFLU_RS21745	0.13	-0.3
4,896,317	-		PFLU_RS21745	0.13	+0.4
4,896,317	-		PFLU_RS21745	0.13	-0.8
4,896,317	-		PFLU_RS21745	0.13	-0.8
4,896,317	-		PFLU_RS21745	0.13	-0.0
4,896,317	-		PFLU_RS21745	0.13	-0.4
4,896,317	-		PFLU_RS21745	0.13	+0.0
4,896,317	-		PFLU_RS21745	0.13	-0.3
4,896,317	-		PFLU_RS21745	0.13	+0.2
4,896,317	-		PFLU_RS21745	0.13	+0.2
4,896,317	-		PFLU_RS21745	0.13	-0.6
4,896,317	-		PFLU_RS21745	0.13	+0.5
4,896,317	-		PFLU_RS21745	0.13	+0.7
4,896,317	-		PFLU_RS21745	0.13	+0.1
4,896,317	-		PFLU_RS21745	0.13	+0.8
4,896,317	-		PFLU_RS21745	0.13	+1.1
4,896,317	-		PFLU_RS21745	0.13	+0.0
4,896,317	-		PFLU_RS21745	0.13	+1.7
4,896,317	-		PFLU_RS21745	0.13	+1.0
4,896,317	-		PFLU_RS21745	0.13	+0.4
4,896,317	-		PFLU_RS21745	0.13	-0.5
4,896,317	-		PFLU_RS21745	0.13	-1.0
4,896,317	-		PFLU_RS21745	0.13	-0.2
4,896,317	-		PFLU_RS21745	0.13	-0.1
4,896,317	-		PFLU_RS21745	0.13	-0.3
4,896,318	+		PFLU_RS21745	0.13	+0.5
4,896,318	+		PFLU_RS21745	0.13	-0.3
4,896,318	+		PFLU_RS21745	0.13	+0.0
4,896,318	+		PFLU_RS21745	0.13	+0.6
4,896,318	+		PFLU_RS21745	0.13	+1.1
4,896,440	+		PFLU_RS21745	0.20	-0.2
4,896,440	+		PFLU_RS21745	0.20	+0.6
4,896,440	+		PFLU_RS21745	0.20	-0.7
4,896,441	-		PFLU_RS21745	0.21	-0.5
4,896,441	-		PFLU_RS21745	0.21	+0.2
4,896,441	-		PFLU_RS21745	0.21	+0.5
4,896,461	+		PFLU_RS21745	0.22	-0.9
4,896,461	+		PFLU_RS21745	0.22	-0.6
4,896,462	-		PFLU_RS21745	0.22	-1.1
4,896,462	-		PFLU_RS21745	0.22	+0.4
4,896,462	-		PFLU_RS21745	0.22	-1.1
4,896,519	-		PFLU_RS21745	0.25	-1.0
4,896,533	+		PFLU_RS21745	0.26	-0.5
4,896,533	+		PFLU_RS21745	0.26	-0.3
4,896,533	+		PFLU_RS21745	0.26	-0.4
4,896,534	-		PFLU_RS21745	0.26	+0.5
4,896,534	-		PFLU_RS21745	0.26	+1.0
4,896,541	+		PFLU_RS21745	0.26	-0.3
4,896,541	+		PFLU_RS21745	0.26	-0.6
4,896,541	+		PFLU_RS21745	0.26	-0.3
4,896,542	-		PFLU_RS21745	0.26	+0.3
4,896,542	-		PFLU_RS21745	0.26	+0.7
4,896,608	+		PFLU_RS21745	0.30	-0.5
4,896,609	-		PFLU_RS21745	0.30	-0.4
4,896,609	-		PFLU_RS21745	0.30	+0.4
4,896,609	-		PFLU_RS21745	0.30	+1.7
4,896,609	-		PFLU_RS21745	0.30	+0.0
4,896,609	-		PFLU_RS21745	0.30	+1.2
4,896,609	-		PFLU_RS21745	0.30	+1.0
4,896,609	-		PFLU_RS21745	0.30	+0.7
4,896,609	-		PFLU_RS21745	0.30	+1.2
4,896,724	+		PFLU_RS21745	0.37	+0.7
4,896,725	-		PFLU_RS21745	0.37	+1.5
4,896,811	+		PFLU_RS21745	0.42	+0.3
4,896,930	+		PFLU_RS21745	0.49	-0.4
4,896,930	+		PFLU_RS21745	0.49	+1.2
4,896,930	+		PFLU_RS21745	0.49	-1.1
4,896,930	+		PFLU_RS21745	0.49	+1.0
4,896,959	+		PFLU_RS21745	0.51	-2.7
4,896,959	+		PFLU_RS21745	0.51	+1.7
4,896,959	+		PFLU_RS21745	0.51	+0.6
4,896,959	+		PFLU_RS21745	0.51	-0.2
4,896,959	+		PFLU_RS21745	0.51	-0.2
4,896,959	+		PFLU_RS21745	0.51	+0.9
4,896,960	-		PFLU_RS21745	0.51	-0.9
4,896,960	-		PFLU_RS21745	0.51	-1.5
4,897,124	+		PFLU_RS21745	0.60	+0.4
4,897,124	+		PFLU_RS21745	0.60	+1.2
4,897,124	+		PFLU_RS21745	0.60	+0.9
4,897,124	+		PFLU_RS21745	0.60	-1.2
4,897,124	+		PFLU_RS21745	0.60	-1.0
4,897,125	-		PFLU_RS21745	0.60	+1.1
4,897,125	-		PFLU_RS21745	0.60	+0.3
4,897,125	-		PFLU_RS21745	0.60	-0.8
4,897,125	-		PFLU_RS21745	0.60	-0.4
4,897,125	-		PFLU_RS21745	0.60	+0.4
4,897,125	-		PFLU_RS21745	0.60	-0.4
4,897,125	-		PFLU_RS21745	0.60	+0.4
4,897,220	+		PFLU_RS21745	0.66	-0.8
4,897,221	-		PFLU_RS21745	0.66	+0.3
4,897,257	-		PFLU_RS21745	0.68	+0.6
4,897,271	+		PFLU_RS21745	0.69	+0.3
4,897,296	+		PFLU_RS21745	0.70	-0.3
4,897,296	+		PFLU_RS21745	0.70	-0.3
4,897,296	+		PFLU_RS21745	0.70	-0.8
4,897,296	+		PFLU_RS21745	0.70	+0.5
4,897,296	+		PFLU_RS21745	0.70	+1.1
4,897,296	+		PFLU_RS21745	0.70	-0.4
4,897,296	+		PFLU_RS21745	0.70	-0.7
4,897,296	+		PFLU_RS21745	0.70	+0.1
4,897,296	+		PFLU_RS21745	0.70	+1.1
4,897,296	+		PFLU_RS21745	0.70	+0.0
4,897,296	+		PFLU_RS21745	0.70	+0.4
4,897,297	-		PFLU_RS21745	0.70	-0.6
4,897,297	-		PFLU_RS21745	0.70	+0.5
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4,897,297	-		PFLU_RS21745	0.70	+1.1
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4,897,297	-		PFLU_RS21745	0.70	-1.3
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4,897,951	+		PFLU_RS21750	0.48	+2.4
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4,897,996	+		PFLU_RS21750	0.63	-0.2
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4,897,997	-		PFLU_RS21750	0.63	+2.1
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4,898,088	+				+0.5
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4,898,088	+				-1.8
4,898,088	+				-1.1
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4,898,735	-		PFLU_RS21755	0.81	+1.0