Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_08510 and OH686_08515 are separated by 245 nucleotides OH686_08515 and OH686_08520 are separated by 0 nucleotides OH686_08520 and OH686_08525 are separated by 9 nucleotides
OH686_08510: OH686_08510 - Phospholipid ABC transporter ATP-binding protein MlaF, at 1,730,879 to 1,731,688
_08510
OH686_08515: OH686_08515 - D-arabinose-5-phosphate isomerase , at 1,731,934 to 1,732,908
_08515
OH686_08520: OH686_08520 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase , at 1,732,909 to 1,733,433
_08520
OH686_08525: OH686_08525 - LPS export ABC transporter periplasmic protein LptC, at 1,733,443 to 1,734,012
_08525
Position (kb)
1731
1732
1733 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.042 kb on + strand, within OH686_08510 at 1731.043 kb on - strand, within OH686_08510 at 1731.043 kb on - strand, within OH686_08510 at 1731.043 kb on - strand, within OH686_08510 at 1731.043 kb on - strand, within OH686_08510 at 1731.043 kb on - strand, within OH686_08510 at 1731.049 kb on - strand, within OH686_08510 at 1731.049 kb on - strand, within OH686_08510 at 1731.187 kb on - strand, within OH686_08510 at 1731.614 kb on - strand at 1731.670 kb on - strand at 1731.670 kb on - strand at 1731.670 kb on - strand at 1731.783 kb on + strand at 1731.783 kb on + strand at 1731.783 kb on + strand at 1731.784 kb on - strand at 1731.784 kb on - strand at 1731.784 kb on - strand at 1731.784 kb on - strand at 1731.784 kb on - strand at 1731.785 kb on + strand at 1731.785 kb on + strand at 1731.785 kb on + strand at 1731.785 kb on + strand at 1731.785 kb on + strand at 1731.785 kb on + strand at 1731.786 kb on - strand at 1731.786 kb on - strand at 1731.786 kb on - strand at 1731.786 kb on - strand at 1731.786 kb on - strand at 1731.786 kb on - strand at 1731.894 kb on + strand at 1731.895 kb on - strand at 1731.896 kb on + strand at 1731.896 kb on + strand at 1731.896 kb on + strand at 1731.896 kb on + strand at 1731.896 kb on + strand at 1731.896 kb on + strand at 1731.896 kb on + strand at 1731.896 kb on + strand at 1731.896 kb on + strand at 1731.897 kb on - strand at 1731.897 kb on - strand at 1731.897 kb on - strand at 1731.897 kb on - strand at 1731.910 kb on + strand at 1731.910 kb on + strand at 1731.910 kb on + strand at 1731.911 kb on - strand at 1731.911 kb on - strand at 1732.901 kb on + strand at 1732.901 kb on + strand at 1732.906 kb on + strand at 1732.906 kb on + strand at 1733.431 kb on + strand at 1733.431 kb on + strand at 1733.431 kb on + strand at 1733.431 kb on + strand at 1733.431 kb on + strand at 1733.861 kb on + strand, within OH686_08525 at 1733.861 kb on + strand, within OH686_08525 at 1733.861 kb on + strand, within OH686_08525 at 1733.861 kb on + strand, within OH686_08525 at 1733.878 kb on + strand, within OH686_08525 at 1733.878 kb on + strand, within OH686_08525
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 1,731,042 + OH686_08510 0.20 -0.0 1,731,042 + OH686_08510 0.20 -0.0 1,731,042 + OH686_08510 0.20 -0.0 1,731,042 + OH686_08510 0.20 -1.0 1,731,042 + OH686_08510 0.20 -0.0 1,731,042 + OH686_08510 0.20 -0.4 1,731,042 + OH686_08510 0.20 -0.0 1,731,042 + OH686_08510 0.20 -0.8 1,731,042 + OH686_08510 0.20 +2.0 1,731,042 + OH686_08510 0.20 -1.0 1,731,042 + OH686_08510 0.20 -0.4 1,731,042 + OH686_08510 0.20 -1.0 1,731,042 + OH686_08510 0.20 -0.0 1,731,043 - OH686_08510 0.20 -0.4 1,731,043 - OH686_08510 0.20 -0.8 1,731,043 - OH686_08510 0.20 -0.0 1,731,043 - OH686_08510 0.20 -0.0 1,731,043 - OH686_08510 0.20 -0.0 1,731,049 - OH686_08510 0.21 -0.0 1,731,049 - OH686_08510 0.21 -0.6 1,731,187 - OH686_08510 0.38 +2.0 1,731,614 - -0.6 1,731,670 - -0.0 1,731,670 - +1.6 1,731,670 - -0.4 1,731,783 + -0.2 1,731,783 + -0.8 1,731,783 + +0.6 1,731,784 - +0.3 1,731,784 - -1.0 1,731,784 - -0.2 1,731,784 - -0.9 1,731,784 - +0.2 1,731,785 + -0.1 1,731,785 + +0.5 1,731,785 + +0.1 1,731,785 + +0.3 1,731,785 + -0.0 1,731,785 + +1.7 1,731,786 - +0.2 1,731,786 - +0.3 1,731,786 - -1.2 1,731,786 - -0.7 1,731,786 - +0.9 1,731,786 - -0.6 1,731,894 + -0.4 1,731,895 - +0.4 1,731,896 + +0.0 1,731,896 + +0.1 1,731,896 + -0.3 1,731,896 + -0.1 1,731,896 + +0.5 1,731,896 + -0.5 1,731,896 + +0.4 1,731,896 + +0.2 1,731,896 + +0.1 1,731,897 - -0.4 1,731,897 - -0.8 1,731,897 - +0.2 1,731,897 - -0.7 1,731,910 + +0.3 1,731,910 + +0.1 1,731,910 + -0.9 1,731,911 - -0.7 1,731,911 - -1.0 1,732,901 + +0.1 1,732,901 + +1.4 1,732,906 + -0.8 1,732,906 + -1.1 1,733,431 + +1.0 1,733,431 + -1.3 1,733,431 + -0.4 1,733,431 + -0.3 1,733,431 + -0.2 1,733,861 + OH686_08525 0.73 -0.9 1,733,861 + OH686_08525 0.73 -2.2 1,733,861 + OH686_08525 0.73 -1.4 1,733,861 + OH686_08525 0.73 -2.4 1,733,878 + OH686_08525 0.76 -0.7 1,733,878 + OH686_08525 0.76 -1.6
Or see this region's nucleotide sequence