Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3989

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
4,781,386	+		Echvi_3988	0.50	+0.3
4,781,386	+		Echvi_3988	0.50	-0.8
4,781,402	+		Echvi_3988	0.51	-2.5
4,781,432	+		Echvi_3988	0.53	-2.1
4,781,432	+		Echvi_3988	0.53	-0.1
4,781,465	-		Echvi_3988	0.55	-1.2
4,781,533	+		Echvi_3988	0.59	+0.1
4,781,664	+		Echvi_3988	0.67	+0.1
4,781,665	-		Echvi_3988	0.68	+0.8
4,781,712	+		Echvi_3988	0.70	-0.8
4,781,712	+		Echvi_3988	0.70	-0.5
4,781,712	+		Echvi_3988	0.70	+0.7
4,781,727	+		Echvi_3988	0.71	+0.2
4,781,728	-		Echvi_3988	0.71	-0.0
4,781,728	-		Echvi_3988	0.71	-1.2
4,781,770	+		Echvi_3988	0.74	-0.4
4,781,771	-		Echvi_3988	0.74	+1.5
4,781,853	+		Echvi_3988	0.79	-1.6
4,781,861	+		Echvi_3988	0.80	-0.5
4,781,881	+		Echvi_3988	0.81	+0.4
4,781,882	-		Echvi_3988	0.81	-0.7
4,781,926	+		Echvi_3988	0.84	+1.2
4,781,926	+		Echvi_3988	0.84	+0.0
4,781,927	-		Echvi_3988	0.84	+0.5
4,781,927	-		Echvi_3988	0.84	-0.7
4,781,927	-		Echvi_3988	0.84	-0.2
4,781,930	+		Echvi_3988	0.84	+0.5
4,781,930	+		Echvi_3988	0.84	-0.2
4,781,930	+		Echvi_3988	0.84	-0.2
4,781,976	-		Echvi_3988	0.87	-0.1
4,781,977	+		Echvi_3988	0.87	+0.0
4,781,977	+		Echvi_3988	0.87	-0.2
4,781,977	+		Echvi_3988	0.87	-1.2
4,781,978	-		Echvi_3988	0.87	-0.3
4,781,984	+		Echvi_3988	0.87	-1.8
4,782,004	+		Echvi_3988	0.88	-1.3
4,782,005	-		Echvi_3988	0.88	+0.7
4,782,017	+		Echvi_3988	0.89	-0.6
4,782,018	-		Echvi_3988	0.89	+0.1
4,782,037	+				+0.5
4,782,083	-				-0.0
4,782,102	-				+4.1
4,782,173	+				-1.3
4,782,175	+				-1.8
4,782,237	+				-1.0
4,782,237	+				-0.9
4,782,237	+				+0.2
4,782,340	+				+0.0
4,782,363	+				-0.1
4,782,364	-				-2.1
4,782,415	+				-1.6
4,782,415	+				+0.6
4,782,417	+				-0.1
4,782,428	+				-0.7
4,782,428	+				+1.2
4,782,429	-				-1.3
4,782,429	-				+0.8
4,782,443	+				-1.1
4,782,444	-				-0.9
4,782,465	+				+0.4
4,782,465	+				+0.3
4,782,465	+				+0.5
4,782,465	+				-0.9
4,782,465	+				-1.7
4,782,466	-				-0.3
4,782,466	-				+1.6
4,782,490	+				+0.0
4,782,579	+		Echvi_3989	0.11	-1.1
4,782,579	+		Echvi_3989	0.11	+2.4
4,782,580	-		Echvi_3989	0.11	+2.1
4,782,595	-		Echvi_3989	0.12	+2.5
4,782,598	+		Echvi_3989	0.12	-0.4
4,782,598	+		Echvi_3989	0.12	-0.3
4,782,598	+		Echvi_3989	0.12	+0.4
4,782,698	-		Echvi_3989	0.15	-1.0
4,782,699	+		Echvi_3989	0.15	+1.0
4,782,699	+		Echvi_3989	0.15	-0.9
4,782,745	-		Echvi_3989	0.16	-0.4
4,782,748	+		Echvi_3989	0.16	-1.2
4,782,790	-		Echvi_3989	0.17	-1.6
4,782,884	+		Echvi_3989	0.20	+0.0
4,782,885	-		Echvi_3989	0.20	-1.2
4,782,885	-		Echvi_3989	0.20	+0.6
4,782,885	-		Echvi_3989	0.20	-0.3
4,782,889	-		Echvi_3989	0.20	-0.9
4,782,889	-		Echvi_3989	0.20	-0.4
4,782,927	-		Echvi_3989	0.21	-0.6
4,782,977	-		Echvi_3989	0.23	-0.3
4,783,010	-		Echvi_3989	0.24	-0.4
4,783,038	+		Echvi_3989	0.25	+1.0
4,783,138	+		Echvi_3989	0.28	-0.1
4,783,138	+		Echvi_3989	0.28	-0.5
4,783,139	-		Echvi_3989	0.28	-0.8
4,783,153	+		Echvi_3989	0.28	+1.2
4,783,154	-		Echvi_3989	0.28	+2.7
4,783,299	+		Echvi_3989	0.32	-0.9
4,783,300	-		Echvi_3989	0.32	+0.9
4,783,420	+		Echvi_3989	0.36	-0.3
4,783,444	-		Echvi_3989	0.37	-0.1
4,783,533	+		Echvi_3989	0.39	-0.1
4,783,578	-		Echvi_3989	0.41	-0.7
4,783,609	+		Echvi_3989	0.42	+1.1
4,783,611	+		Echvi_3989	0.42	+1.0
4,783,628	-		Echvi_3989	0.42	+0.1
4,783,675	+		Echvi_3989	0.44	-1.3
4,783,676	-		Echvi_3989	0.44	-0.4
4,783,677	+		Echvi_3989	0.44	-1.1
4,783,678	-		Echvi_3989	0.44	+1.0
4,783,678	-		Echvi_3989	0.44	+1.6
4,783,721	+		Echvi_3989	0.45	-1.3
4,783,722	-		Echvi_3989	0.45	-0.2
4,783,760	-		Echvi_3989	0.46	+1.2
4,783,760	-		Echvi_3989	0.46	+0.4
4,783,762	+		Echvi_3989	0.46	+0.8
4,783,762	+		Echvi_3989	0.46	+0.1
4,783,762	+		Echvi_3989	0.46	+0.6
4,783,762	+		Echvi_3989	0.46	+0.3
4,783,763	-		Echvi_3989	0.46	+0.4
4,783,763	-		Echvi_3989	0.46	+0.6
4,783,764	+		Echvi_3989	0.46	-1.0
4,783,765	-		Echvi_3989	0.46	+0.6
4,783,786	+		Echvi_3989	0.47	-1.4
4,783,878	+		Echvi_3989	0.50	+1.6
4,783,878	+		Echvi_3989	0.50	-0.1
4,783,879	-		Echvi_3989	0.50	-0.7
4,783,879	-		Echvi_3989	0.50	-1.7
4,783,879	-		Echvi_3989	0.50	+0.0
4,783,879	-		Echvi_3989	0.50	-0.3
4,783,882	+		Echvi_3989	0.50	-0.6
4,783,882	+		Echvi_3989	0.50	-1.3
4,783,882	+		Echvi_3989	0.50	+0.7
4,783,882	+		Echvi_3989	0.50	+0.0
4,783,883	-		Echvi_3989	0.50	+0.8
4,783,883	-		Echvi_3989	0.50	-0.4
4,783,893	+		Echvi_3989	0.50	-0.1
4,783,893	+		Echvi_3989	0.50	-2.0
4,783,894	-		Echvi_3989	0.50	-0.7
4,783,900	+		Echvi_3989	0.50	+1.2
4,783,900	+		Echvi_3989	0.50	-0.7
4,783,981	+		Echvi_3989	0.53	-1.0
4,784,079	+		Echvi_3989	0.56	+0.4
4,784,079	+		Echvi_3989	0.56	+2.1
4,784,157	+		Echvi_3989	0.58	+1.0
4,784,157	+		Echvi_3989	0.58	-0.2
4,784,246	+		Echvi_3989	0.60	+0.4
4,784,270	-		Echvi_3989	0.61	+1.7
4,784,270	-		Echvi_3989	0.61	+0.4
4,784,290	-		Echvi_3989	0.62	+0.2
4,784,327	-		Echvi_3989	0.63	+0.5
4,784,394	-		Echvi_3989	0.65	-1.0
4,784,417	-		Echvi_3989	0.66	+1.0
4,784,535	+		Echvi_3989	0.69	+0.5
4,784,536	-		Echvi_3989	0.69	-0.6
4,784,617	+		Echvi_3989	0.72	-1.3
4,784,617	+		Echvi_3989	0.72	-1.1
4,784,681	+		Echvi_3989	0.73	+1.6
4,784,682	-		Echvi_3989	0.73	-0.3
4,784,683	+		Echvi_3989	0.73	-0.8
4,784,722	+		Echvi_3989	0.75	-0.5
4,784,723	-		Echvi_3989	0.75	+1.7
4,784,723	-		Echvi_3989	0.75	+0.7
4,784,743	+		Echvi_3989	0.75	+0.3
4,784,914	+		Echvi_3989	0.80	-1.7
4,784,919	+		Echvi_3989	0.80	+0.1
4,785,022	+		Echvi_3989	0.84	+0.5
4,785,023	-		Echvi_3989	0.84	+0.3
4,785,024	+		Echvi_3989	0.84	-0.1
4,785,024	+		Echvi_3989	0.84	+0.4
4,785,025	-		Echvi_3989	0.84	-1.0
4,785,025	-		Echvi_3989	0.84	-0.6
4,785,025	-		Echvi_3989	0.84	+1.0
4,785,025	-		Echvi_3989	0.84	-0.2
4,785,040	+		Echvi_3989	0.84	+1.9
4,785,041	-		Echvi_3989	0.84	-2.3
4,785,260	-				-1.7
4,785,266	+				+0.4
4,785,286	+				-0.1
4,785,402	+				+0.4
4,785,403	-				-0.3
4,785,511	+				-1.4
4,785,511	+				+0.8
4,785,511	+				+1.1
4,785,512	-				-1.2
4,785,512	-				+0.6
4,785,512	-				-0.8
4,785,512	-				-0.2
4,785,512	-				+2.9
4,785,512	-				-0.0
4,785,600	+				-0.5
4,785,600	+				-0.8
4,785,601	-				-0.4
4,785,622	+				-1.3
4,785,623	-				+0.2
4,785,631	+				-0.9
4,785,645	-				+1.3
4,785,660	-				-0.0
4,785,671	-				+0.7
4,785,671	-				-1.4
4,785,684	+				+1.3
4,785,739	-		Echvi_3990	0.13	+1.3
4,785,739	-		Echvi_3990	0.13	+0.9
4,785,786	+		Echvi_3990	0.17	+3.1
4,785,873	+		Echvi_3990	0.25	-0.8
4,785,873	+		Echvi_3990	0.25	+1.3
4,785,879	+		Echvi_3990	0.26	-0.5
4,785,880	-		Echvi_3990	0.26	-1.4
4,785,908	+		Echvi_3990	0.29	+1.0
4,785,908	+		Echvi_3990	0.29	-0.0
4,785,908	+		Echvi_3990	0.29	+0.1
4,785,908	+		Echvi_3990	0.29	-0.6
4,785,908	+		Echvi_3990	0.29	-0.6
4,785,909	-		Echvi_3990	0.29	+0.3
4,785,909	-		Echvi_3990	0.29	+1.0
4,785,969	-		Echvi_3990	0.34	+0.8
4,785,975	-		Echvi_3990	0.35	+0.3
4,786,057	+		Echvi_3990	0.42	+0.5
4,786,076	+		Echvi_3990	0.44	+0.9
4,786,103	+		Echvi_3990	0.47	-0.1
4,786,104	-		Echvi_3990	0.47	-0.8
4,786,104	-		Echvi_3990	0.47	-0.9
4,786,190	+		Echvi_3990	0.55	+0.4
4,786,224	-		Echvi_3990	0.58	-1.3
4,786,325	+		Echvi_3990	0.68	+0.2
4,786,437	+		Echvi_3990	0.78	-0.1
4,786,535	+		Echvi_3990	0.87	+0.1
4,786,535	+		Echvi_3990	0.87	+1.1
4,786,535	+		Echvi_3990	0.87	+0.1
4,786,536	-		Echvi_3990	0.87	+0.8
4,786,536	-		Echvi_3990	0.87	+0.4