Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2964

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,540,502	+		Echvi_2963	0.28	+0.0
3,540,506	-		Echvi_2963	0.29	-0.5
3,540,508	+		Echvi_2963	0.29	-0.3
3,540,508	+		Echvi_2963	0.29	+1.2
3,540,508	+		Echvi_2963	0.29	+0.1
3,540,509	-		Echvi_2963	0.29	+1.7
3,540,509	-		Echvi_2963	0.29	-0.0
3,540,516	-		Echvi_2963	0.30	-0.6
3,540,620	-		Echvi_2963	0.38	+0.4
3,540,640	-		Echvi_2963	0.40	-0.1
3,540,640	-		Echvi_2963	0.40	-0.3
3,540,640	-		Echvi_2963	0.40	+0.9
3,540,642	-		Echvi_2963	0.40	+0.2
3,540,642	-		Echvi_2963	0.40	+0.9
3,540,766	+		Echvi_2963	0.50	+1.1
3,540,766	+		Echvi_2963	0.50	-0.6
3,540,767	-		Echvi_2963	0.50	+0.4
3,540,767	-		Echvi_2963	0.50	-0.2
3,540,787	+		Echvi_2963	0.52	+0.6
3,540,790	+		Echvi_2963	0.52	-0.3
3,540,790	+		Echvi_2963	0.52	-0.1
3,540,803	+		Echvi_2963	0.53	-1.8
3,540,820	-		Echvi_2963	0.54	+0.3
3,540,823	+		Echvi_2963	0.54	+0.6
3,540,824	-		Echvi_2963	0.55	+0.5
3,540,824	-		Echvi_2963	0.55	-0.7
3,540,861	-		Echvi_2963	0.58	-1.4
3,540,863	-		Echvi_2963	0.58	-0.5
3,540,868	+		Echvi_2963	0.58	-0.0
3,540,868	+		Echvi_2963	0.58	-0.4
3,540,868	+		Echvi_2963	0.58	-1.5
3,540,868	+		Echvi_2963	0.58	-0.5
3,540,869	-		Echvi_2963	0.58	-0.5
3,540,869	-		Echvi_2963	0.58	+1.8
3,540,869	-		Echvi_2963	0.58	+0.2
3,540,881	-		Echvi_2963	0.59	-0.9
3,540,911	+		Echvi_2963	0.62	+0.7
3,540,911	+		Echvi_2963	0.62	-0.1
3,540,912	-		Echvi_2963	0.62	+0.9
3,540,912	-		Echvi_2963	0.62	+0.6
3,540,912	-		Echvi_2963	0.62	+2.9
3,540,914	-		Echvi_2963	0.62	-3.3
3,540,922	+		Echvi_2963	0.62	+1.2
3,540,922	+		Echvi_2963	0.62	+0.0
3,540,922	+		Echvi_2963	0.62	+0.0
3,540,923	-		Echvi_2963	0.63	-0.4
3,540,923	-		Echvi_2963	0.63	-1.3
3,540,925	-		Echvi_2963	0.63	-0.0
3,540,974	-		Echvi_2963	0.67	+0.4
3,540,979	-		Echvi_2963	0.67	+0.4
3,541,024	-		Echvi_2963	0.71	+0.2
3,541,024	-		Echvi_2963	0.71	+1.0
3,541,066	-		Echvi_2963	0.74	+0.1
3,541,122	-		Echvi_2963	0.79	-1.2
3,541,165	-		Echvi_2963	0.82	-0.6
3,541,265	+				+0.8
3,541,266	-				+0.1
3,541,274	-				+0.2
3,541,300	+				-1.1
3,541,385	+				-1.1
3,541,385	+				-0.2
3,541,386	-				+0.2
3,541,442	+				+0.7
3,541,443	-				+0.5
3,541,516	-				+0.2
3,541,520	+				+0.3
3,541,556	-		Echvi_2964	0.13	+0.5
3,541,577	+		Echvi_2964	0.17	+2.5
3,541,577	+		Echvi_2964	0.17	+1.0
3,541,577	+		Echvi_2964	0.17	+2.0
3,541,577	+		Echvi_2964	0.17	+0.2
3,541,577	+		Echvi_2964	0.17	+2.8
3,541,578	-		Echvi_2964	0.17	+1.1
3,541,578	-		Echvi_2964	0.17	+0.6
3,541,582	+		Echvi_2964	0.18	+0.8
3,541,582	+		Echvi_2964	0.18	+0.5
3,541,595	-		Echvi_2964	0.20	-1.4
3,541,595	-		Echvi_2964	0.20	+1.0
3,541,598	+		Echvi_2964	0.20	-1.2
3,541,598	+		Echvi_2964	0.20	-1.4
3,541,599	-		Echvi_2964	0.21	-0.7
3,541,626	-		Echvi_2964	0.25	+1.3
3,541,633	+		Echvi_2964	0.26	-0.1
3,541,648	+		Echvi_2964	0.29	-1.5
3,541,667	+		Echvi_2964	0.32	+0.8
3,541,668	-		Echvi_2964	0.32	-0.4
3,541,685	+		Echvi_2964	0.35	-1.1
3,541,766	+		Echvi_2964	0.49	-1.1
3,541,766	+		Echvi_2964	0.49	+0.7
3,541,767	-		Echvi_2964	0.49	-1.1
3,541,767	-		Echvi_2964	0.49	-1.2
3,541,808	-		Echvi_2964	0.56	-0.1
3,541,820	-		Echvi_2964	0.58	-1.2
3,541,821	+		Echvi_2964	0.58	+1.6
3,541,821	+		Echvi_2964	0.58	-0.7
3,541,821	+		Echvi_2964	0.58	+0.2
3,541,872	-		Echvi_2964	0.67	+0.1
3,541,877	+		Echvi_2964	0.68	+0.3
3,541,878	-		Echvi_2964	0.68	+0.6
3,541,882	-		Echvi_2964	0.69	+0.9
3,541,919	+		Echvi_2964	0.75	-1.0
3,541,920	-		Echvi_2964	0.75	-0.4
3,541,982	+		Echvi_2964	0.86	+0.4
3,541,982	+		Echvi_2964	0.86	+1.5
3,541,982	+		Echvi_2964	0.86	+0.0
3,542,071	+				-1.4
3,542,099	-				+1.2
3,542,107	-				-0.8
3,542,110	-				+1.1
3,542,126	-				-2.4
3,542,140	-				-0.1
3,542,150	-				+1.3
3,542,150	-				-1.6
3,542,168	-				-1.5
3,542,168	-				-2.5
3,542,185	+				-0.9
3,542,265	+				-0.9
3,542,265	+				-0.6
3,542,303	-				-0.1
3,542,303	-				-1.1
3,542,344	-				-0.5
3,542,344	-				-1.9
3,542,366	-				+0.5
3,542,367	+				+0.5
3,542,368	-				+2.1
3,542,377	+		Echvi_2965	0.10	+0.1
3,542,377	+		Echvi_2965	0.10	+0.9
3,542,381	+		Echvi_2965	0.11	+1.0
3,542,381	+		Echvi_2965	0.11	-0.7
3,542,382	-		Echvi_2965	0.11	-0.7
3,542,417	-		Echvi_2965	0.14	-1.4
3,542,417	-		Echvi_2965	0.14	-0.4
3,542,506	-		Echvi_2965	0.22	-0.6
3,542,516	-		Echvi_2965	0.23	+0.2
3,542,516	-		Echvi_2965	0.23	-0.3
3,542,516	-		Echvi_2965	0.23	+0.1
3,542,635	+		Echvi_2965	0.34	-0.4
3,542,635	+		Echvi_2965	0.34	+0.2
3,542,636	-		Echvi_2965	0.34	-1.2
3,542,637	+		Echvi_2965	0.34	+0.6
3,542,637	+		Echvi_2965	0.34	+0.5
3,542,638	-		Echvi_2965	0.34	+3.1
3,542,655	-		Echvi_2965	0.35	-1.5
3,542,659	+		Echvi_2965	0.36	-1.3
3,542,721	-		Echvi_2965	0.41	-0.5
3,542,722	+		Echvi_2965	0.41	+0.4
3,542,722	+		Echvi_2965	0.41	-0.4
3,542,722	+		Echvi_2965	0.41	+0.4
3,542,723	-		Echvi_2965	0.41	+0.5
3,542,726	+		Echvi_2965	0.42	-0.2
3,542,726	+		Echvi_2965	0.42	+0.7
3,542,727	-		Echvi_2965	0.42	-0.7
3,542,727	-		Echvi_2965	0.42	-1.2
3,542,737	-		Echvi_2965	0.43	-1.3
3,542,776	+		Echvi_2965	0.46	-0.6
3,542,870	+		Echvi_2965	0.55	-0.6
3,542,870	+		Echvi_2965	0.55	+1.1
3,542,873	+		Echvi_2965	0.55	-0.1
3,542,875	+		Echvi_2965	0.55	+0.4
3,542,875	+		Echvi_2965	0.55	-0.7
3,542,875	+		Echvi_2965	0.55	-0.4
3,542,876	-		Echvi_2965	0.55	-0.3
3,542,876	-		Echvi_2965	0.55	+0.5
3,542,876	-		Echvi_2965	0.55	+0.8
3,542,876	-		Echvi_2965	0.55	-0.4
3,542,906	+		Echvi_2965	0.58	-0.7
3,542,906	+		Echvi_2965	0.58	+1.3
3,542,906	+		Echvi_2965	0.58	+0.3
3,542,906	+		Echvi_2965	0.58	-0.3
3,542,907	-		Echvi_2965	0.58	+0.2
3,542,907	-		Echvi_2965	0.58	-1.1
3,542,907	-		Echvi_2965	0.58	+2.5
3,542,907	-		Echvi_2965	0.58	+0.8
3,542,911	-		Echvi_2965	0.58	+1.3
3,542,911	-		Echvi_2965	0.58	-0.0
3,542,911	-		Echvi_2965	0.58	-0.3
3,543,008	+		Echvi_2965	0.67	+0.5
3,543,013	+		Echvi_2965	0.68	-0.6
3,543,014	-		Echvi_2965	0.68	-0.4
3,543,025	+		Echvi_2965	0.69	-2.2
3,543,026	-		Echvi_2965	0.69	-1.1