Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1210

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,385,620	+		Echvi_1207	0.70	-1.0
1,385,621	-		Echvi_1207	0.70	-1.5
1,385,621	-		Echvi_1207	0.70	+0.8
1,385,661	+		Echvi_1207	0.75	+1.1
1,385,662	-		Echvi_1207	0.75	+0.5
1,385,668	-		Echvi_1207	0.76	-1.1
1,385,708	+		Echvi_1207	0.82	-0.4
1,385,708	+		Echvi_1207	0.82	-0.2
1,385,708	+		Echvi_1207	0.82	-0.1
1,385,709	-		Echvi_1207	0.82	-0.3
1,385,709	-		Echvi_1207	0.82	-0.1
1,385,709	-		Echvi_1207	0.82	-1.0
1,385,709	-		Echvi_1207	0.82	-0.3
1,385,711	+		Echvi_1207	0.82	+1.7
1,385,712	-		Echvi_1207	0.82	+0.8
1,385,712	-		Echvi_1207	0.82	+0.1
1,385,712	-		Echvi_1207	0.82	+0.1
1,385,712	-		Echvi_1207	0.82	-0.1
1,385,775	+				-0.5
1,385,810	+				+0.3
1,385,810	+				+0.0
1,385,811	-				-0.1
1,385,814	-				-0.2
1,385,814	-				-1.1
1,385,861	+				+1.4
1,385,861	+				+1.3
1,385,861	+				+1.1
1,385,862	-				-0.0
1,385,862	-				-0.6
1,385,862	-				+0.6
1,385,862	-				-0.7
1,385,863	+				+0.4
1,385,863	+				+0.1
1,385,863	+				-1.7
1,385,863	+				+0.3
1,385,864	-				-1.5
1,385,864	-				+1.9
1,385,877	+				+0.8
1,385,912	+				-1.1
1,385,921	+				-1.9
1,385,921	+				+0.8
1,385,942	+				+1.0
1,386,097	-		Echvi_1208	0.51	-0.4
1,386,110	+		Echvi_1208	0.54	-0.3
1,386,138	+		Echvi_1208	0.62	+0.9
1,386,139	-		Echvi_1208	0.62	-0.9
1,386,142	+		Echvi_1208	0.63	-1.2
1,386,142	+		Echvi_1208	0.63	+0.9
1,386,142	+		Echvi_1208	0.63	-0.8
1,386,143	-		Echvi_1208	0.63	+0.1
1,386,143	-		Echvi_1208	0.63	-0.4
1,386,143	-		Echvi_1208	0.63	+0.5
1,386,151	+		Echvi_1208	0.66	-1.1
1,386,151	+		Echvi_1208	0.66	-1.5
1,386,152	-		Echvi_1208	0.66	+0.5
1,386,152	-		Echvi_1208	0.66	+0.8
1,386,153	+		Echvi_1208	0.66	+0.5
1,386,154	-		Echvi_1208	0.66	-0.1
1,386,209	+		Echvi_1208	0.82	+0.8
1,386,210	-		Echvi_1208	0.82	+1.1
1,386,273	+				+0.7
1,386,338	+		Echvi_1209	0.19	-1.1
1,386,393	+		Echvi_1209	0.34	+0.1
1,386,393	+		Echvi_1209	0.34	-2.5
1,386,394	-		Echvi_1209	0.34	-0.5
1,386,394	-		Echvi_1209	0.34	-1.7
1,386,394	-		Echvi_1209	0.34	+0.5
1,386,399	+		Echvi_1209	0.36	-0.5
1,386,400	-		Echvi_1209	0.36	-1.3
1,386,400	-		Echvi_1209	0.36	+0.4
1,386,400	-		Echvi_1209	0.36	+1.0
1,386,493	+		Echvi_1209	0.61	+0.2
1,386,494	-		Echvi_1209	0.62	+0.2
1,386,496	-		Echvi_1209	0.62	+0.3
1,386,496	-		Echvi_1209	0.62	-0.1
1,386,496	-		Echvi_1209	0.62	-1.7
1,386,497	+		Echvi_1209	0.63	+0.4
1,386,498	-		Echvi_1209	0.63	-1.5
1,386,498	-		Echvi_1209	0.63	-0.3
1,386,572	+		Echvi_1209	0.83	-0.2
1,386,582	+		Echvi_1209	0.86	-0.1
1,386,583	-		Echvi_1209	0.86	-0.5
1,386,583	-		Echvi_1209	0.86	-0.9
1,386,583	-		Echvi_1209	0.86	+0.8
1,386,596	+				-0.5
1,386,596	+				-0.8
1,386,596	+				+0.4
1,386,596	+				-0.5
1,386,655	-				+0.2
1,386,655	-				+0.2
1,386,763	+		Echvi_1210	0.21	-0.3
1,386,763	+		Echvi_1210	0.21	-0.6
1,386,764	-		Echvi_1210	0.21	-0.5
1,386,796	-		Echvi_1210	0.25	+0.8
1,386,808	+		Echvi_1210	0.27	-0.3
1,386,809	-		Echvi_1210	0.27	+0.5
1,387,022	+		Echvi_1210	0.53	+0.6
1,387,023	-		Echvi_1210	0.53	+1.0
1,387,024	+		Echvi_1210	0.53	-1.3
1,387,024	+		Echvi_1210	0.53	+2.2
1,387,024	+		Echvi_1210	0.53	-0.7
1,387,024	+		Echvi_1210	0.53	+0.3
1,387,024	+		Echvi_1210	0.53	+1.2
1,387,024	+		Echvi_1210	0.53	-0.1
1,387,024	+		Echvi_1210	0.53	+1.0
1,387,024	+		Echvi_1210	0.53	-0.5
1,387,024	+		Echvi_1210	0.53	-0.7
1,387,024	+		Echvi_1210	0.53	+0.5
1,387,024	+		Echvi_1210	0.53	+0.5
1,387,024	+		Echvi_1210	0.53	-0.5
1,387,024	+		Echvi_1210	0.53	+0.5
1,387,024	+		Echvi_1210	0.53	-0.6
1,387,024	+		Echvi_1210	0.53	+0.2
1,387,024	+		Echvi_1210	0.53	-0.5
1,387,025	-		Echvi_1210	0.54	-0.1
1,387,025	-		Echvi_1210	0.54	-2.0
1,387,025	-		Echvi_1210	0.54	-0.6
1,387,025	-		Echvi_1210	0.54	+1.8
1,387,025	-		Echvi_1210	0.54	+0.3
1,387,025	-		Echvi_1210	0.54	+0.4
1,387,025	-		Echvi_1210	0.54	+0.3
1,387,025	-		Echvi_1210	0.54	+2.7
1,387,025	-		Echvi_1210	0.54	+1.7
1,387,025	-		Echvi_1210	0.54	+0.2
1,387,025	-		Echvi_1210	0.54	+0.3
1,387,025	-		Echvi_1210	0.54	-0.5
1,387,025	-		Echvi_1210	0.54	-0.3
1,387,061	+		Echvi_1210	0.58	+1.7
1,387,062	-		Echvi_1210	0.58	-1.2
1,387,062	-		Echvi_1210	0.58	-0.2
1,387,078	-		Echvi_1210	0.60	-0.1
1,387,093	+		Echvi_1210	0.62	-0.1
1,387,093	+		Echvi_1210	0.62	-0.1
1,387,093	+		Echvi_1210	0.62	+0.6
1,387,094	-		Echvi_1210	0.62	+0.9
1,387,094	-		Echvi_1210	0.62	+1.3
1,387,149	-		Echvi_1210	0.69	+0.1
1,387,225	-		Echvi_1210	0.78	+0.3
1,387,225	-		Echvi_1210	0.78	+0.1
1,387,225	-		Echvi_1210	0.78	-0.2
1,387,225	-		Echvi_1210	0.78	-0.5
1,387,362	+				+0.4
1,387,362	+				-1.9
1,387,362	+				+0.7
1,387,373	+				-1.3
1,387,394	-				+0.4
1,387,437	+				-0.9
1,387,437	+				+0.7
1,387,438	-				-1.5
1,387,464	+				+0.1
1,387,465	-				+2.0
1,387,465	-				-1.1
1,387,471	+				-1.2
1,387,492	+		Echvi_1211	0.12	-1.4
1,387,519	+		Echvi_1211	0.15	-1.1
1,387,522	+		Echvi_1211	0.15	-0.3
1,387,529	+		Echvi_1211	0.16	-0.1
1,387,529	+		Echvi_1211	0.16	+1.7
1,387,566	+		Echvi_1211	0.20	-1.0
1,387,567	-		Echvi_1211	0.20	+1.3
1,387,610	+		Echvi_1211	0.25	+1.0
1,387,611	-		Echvi_1211	0.25	+0.3
1,387,611	-		Echvi_1211	0.25	-2.3
1,387,614	+		Echvi_1211	0.25	-1.5
1,387,614	+		Echvi_1211	0.25	+1.1
1,387,614	+		Echvi_1211	0.25	-0.9
1,387,614	+		Echvi_1211	0.25	-0.7
1,387,614	+		Echvi_1211	0.25	+0.3
1,387,625	+		Echvi_1211	0.26	-0.5
1,387,646	+		Echvi_1211	0.28	+0.7
1,387,646	+		Echvi_1211	0.28	+0.7
1,387,646	+		Echvi_1211	0.28	-1.1
1,387,646	+		Echvi_1211	0.28	-2.5
1,387,646	+		Echvi_1211	0.28	-1.1
1,387,686	+		Echvi_1211	0.33	-2.0
1,387,686	+		Echvi_1211	0.33	-0.6
1,387,726	+		Echvi_1211	0.37	-0.3
1,387,726	+		Echvi_1211	0.37	+0.5
1,387,726	+		Echvi_1211	0.37	-2.2
1,387,778	+		Echvi_1211	0.43	-0.8
1,387,816	+		Echvi_1211	0.47	-0.2
1,387,903	+		Echvi_1211	0.56	+0.6
1,387,999	+		Echvi_1211	0.66	+0.9
1,387,999	+		Echvi_1211	0.66	+0.3
1,387,999	+		Echvi_1211	0.66	-0.8
1,388,000	-		Echvi_1211	0.66	+1.3
1,388,000	-		Echvi_1211	0.66	-0.2
1,388,000	-		Echvi_1211	0.66	-1.2
1,388,000	-		Echvi_1211	0.66	+0.5
1,388,016	-		Echvi_1211	0.68	+0.4
1,388,024	+		Echvi_1211	0.69	+0.3
1,388,025	-		Echvi_1211	0.69	-0.7
1,388,148	-		Echvi_1211	0.82	-1.0
1,388,148	-		Echvi_1211	0.82	+0.3
1,388,172	-		Echvi_1211	0.85	+0.7
1,388,190	-		Echvi_1211	0.87	-1.9
1,388,213	+		Echvi_1211	0.89	+1.0
1,388,213	+		Echvi_1211	0.89	-0.4
1,388,213	+		Echvi_1211	0.89	-0.4
1,388,213	+		Echvi_1211	0.89	-0.3
1,388,214	-		Echvi_1211	0.89	+0.7
1,388,233	+				+0.1
1,388,233	+				+0.4
1,388,233	-				+0.5
1,388,234	-				+1.3
1,388,234	-				+1.3
1,388,234	-				-0.7
1,388,244	-				-0.6
1,388,250	+				-1.0
1,388,250	+				-0.5
1,388,251	-				+1.5
1,388,269	-				-0.3
1,388,339	-				-0.1
1,388,365	-				+1.4