Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0928

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,065,134	+		Echvi_0927	0.76	+0.7
1,065,135	-		Echvi_0927	0.76	-0.7
1,065,155	+		Echvi_0927	0.77	+0.3
1,065,155	+		Echvi_0927	0.77	-0.1
1,065,155	+		Echvi_0927	0.77	+0.3
1,065,155	+		Echvi_0927	0.77	+0.0
1,065,156	-		Echvi_0927	0.77	+0.4
1,065,156	-		Echvi_0927	0.77	-0.4
1,065,156	-		Echvi_0927	0.77	-1.3
1,065,156	-		Echvi_0927	0.77	+0.9
1,065,285	-		Echvi_0927	0.82	+0.2
1,065,285	-		Echvi_0927	0.82	-1.3
1,065,359	+		Echvi_0927	0.84	+0.9
1,065,359	+		Echvi_0927	0.84	-0.0
1,065,359	+		Echvi_0927	0.84	+0.3
1,065,360	-		Echvi_0927	0.84	-0.5
1,065,360	-		Echvi_0927	0.84	-0.4
1,065,360	-		Echvi_0927	0.84	+1.3
1,065,405	+		Echvi_0927	0.86	+0.7
1,065,405	+		Echvi_0927	0.86	-0.6
1,065,406	-		Echvi_0927	0.86	-0.1
1,065,428	-		Echvi_0927	0.87	-0.3
1,065,441	-		Echvi_0927	0.87	-0.0
1,065,441	-		Echvi_0927	0.87	-1.5
1,065,699	+				-1.3
1,065,700	-				-1.3
1,065,700	-				-1.7
1,065,727	+				-0.4
1,065,730	+				-0.2
1,065,730	+				-0.6
1,065,731	-				-0.5
1,065,731	-				+0.0
1,065,781	-				+0.4
1,065,781	-				-0.9
1,065,857	+				-0.4
1,065,899	+				+0.9
1,065,900	-				-0.4
1,065,908	+				-0.1
1,065,914	+				+0.2
1,065,914	+				+0.1
1,065,914	+				+0.8
1,065,915	-				-0.3
1,065,932	+				-0.5
1,065,932	+				-0.1
1,066,051	+				-0.7
1,066,051	+				-1.5
1,066,052	-				+0.8
1,066,052	-				+1.3
1,066,058	+				+0.3
1,066,070	+				-0.1
1,066,070	+				+0.1
1,066,070	+				+2.8
1,066,070	+				-1.0
1,066,070	+				-1.8
1,066,070	+				+0.5
1,066,071	-				+0.1
1,066,071	-				-0.5
1,066,077	+				-0.9
1,066,078	-				-1.0
1,066,090	+				+0.2
1,066,125	+				+1.7
1,066,125	+				-0.5
1,066,125	+				-0.6
1,066,126	-				+0.8
1,066,128	+				-0.6
1,066,128	+				-1.2
1,066,128	+				-0.1
1,066,129	-				+2.2
1,066,195	-				-0.6
1,066,195	-				-0.4
1,066,231	-				+0.4
1,066,231	-				-1.3
1,066,316	+				+2.9
1,066,317	-				+0.2
1,066,349	+		Echvi_0928	0.12	+1.3
1,066,349	+		Echvi_0928	0.12	-1.1
1,066,350	-		Echvi_0928	0.12	-0.6
1,066,369	-		Echvi_0928	0.13	-1.3
1,066,386	+		Echvi_0928	0.13	-0.4
1,066,400	-		Echvi_0928	0.14	-0.1
1,066,532	-		Echvi_0928	0.21	-0.1
1,066,553	-		Echvi_0928	0.22	-0.3
1,066,566	-		Echvi_0928	0.23	+0.0
1,066,617	+		Echvi_0928	0.25	+0.8
1,066,633	+		Echvi_0928	0.26	+0.4
1,066,668	+		Echvi_0928	0.28	-0.9
1,066,668	+		Echvi_0928	0.28	-0.5
1,066,668	+		Echvi_0928	0.28	-0.2
1,066,668	+		Echvi_0928	0.28	+0.1
1,066,668	+		Echvi_0928	0.28	-0.5
1,066,668	+		Echvi_0928	0.28	-1.4
1,066,668	+		Echvi_0928	0.28	-0.2
1,066,669	-		Echvi_0928	0.28	-1.3
1,066,669	-		Echvi_0928	0.28	-2.0
1,066,775	+		Echvi_0928	0.33	+0.1
1,066,775	+		Echvi_0928	0.33	-1.1
1,066,776	-		Echvi_0928	0.33	-0.1
1,066,776	-		Echvi_0928	0.33	-0.5
1,066,797	+		Echvi_0928	0.34	-0.5
1,066,797	+		Echvi_0928	0.34	-0.1
1,066,798	-		Echvi_0928	0.34	-0.9
1,066,798	-		Echvi_0928	0.34	-1.3
1,066,798	-		Echvi_0928	0.34	+0.8
1,066,798	-		Echvi_0928	0.34	-1.1
1,066,878	+		Echvi_0928	0.39	+1.6
1,066,917	-		Echvi_0928	0.41	+0.7
1,066,936	-		Echvi_0928	0.42	+0.1
1,066,994	-		Echvi_0928	0.44	+2.1
1,066,995	+		Echvi_0928	0.45	-0.0
1,066,995	+		Echvi_0928	0.45	-1.1
1,066,995	+		Echvi_0928	0.45	-0.6
1,066,995	+		Echvi_0928	0.45	+0.5
1,067,082	+		Echvi_0928	0.49	-1.2
1,067,082	+		Echvi_0928	0.49	+0.7
1,067,082	+		Echvi_0928	0.49	-0.1
1,067,174	-		Echvi_0928	0.54	-1.5
1,067,311	-		Echvi_0928	0.61	-1.9
1,067,350	+		Echvi_0928	0.63	+0.7
1,067,351	-		Echvi_0928	0.63	+0.6
1,067,351	-		Echvi_0928	0.63	+1.5
1,067,422	+		Echvi_0928	0.66	-0.2
1,067,463	+		Echvi_0928	0.68	+0.3
1,067,463	+		Echvi_0928	0.68	+0.5
1,067,464	-		Echvi_0928	0.69	+0.9
1,067,464	-		Echvi_0928	0.69	-0.1
1,067,466	+		Echvi_0928	0.69	+0.4
1,067,466	+		Echvi_0928	0.69	+0.2
1,067,502	+		Echvi_0928	0.70	+0.3
1,067,503	-		Echvi_0928	0.71	+0.2
1,067,503	-		Echvi_0928	0.71	-1.2
1,067,584	+		Echvi_0928	0.75	+1.0
1,067,694	+		Echvi_0928	0.80	-0.6
1,067,694	+		Echvi_0928	0.80	+1.6
1,067,703	+		Echvi_0928	0.81	-2.0
1,067,745	+		Echvi_0928	0.83	+0.2
1,067,745	+		Echvi_0928	0.83	-0.6
1,067,746	-		Echvi_0928	0.83	+1.6
1,067,746	-		Echvi_0928	0.83	-1.6
1,067,831	+		Echvi_0928	0.87	-0.1
1,067,866	+		Echvi_0928	0.89	-1.3
1,067,866	+		Echvi_0928	0.89	-0.1
1,067,867	-		Echvi_0928	0.89	+0.7
1,067,867	-		Echvi_0928	0.89	+0.3
1,067,877	+		Echvi_0928	0.90	+0.8
1,067,878	-		Echvi_0928	0.90	-0.2
1,067,949	-				-0.5
1,067,963	-				-0.8
1,068,107	-				+0.4
1,068,153	+				+1.6
1,068,154	-				-0.1
1,068,193	-		Echvi_0929	0.12	-1.3
1,068,243	-		Echvi_0929	0.17	-2.1
1,068,243	-		Echvi_0929	0.17	-0.5
1,068,255	-		Echvi_0929	0.18	+0.5
1,068,255	-		Echvi_0929	0.18	+0.2
1,068,268	-		Echvi_0929	0.20	-0.8
1,068,288	+		Echvi_0929	0.22	-0.0
1,068,326	+		Echvi_0929	0.26	-1.3
1,068,393	+		Echvi_0929	0.33	+0.2
1,068,393	+		Echvi_0929	0.33	+0.6
1,068,393	+		Echvi_0929	0.33	+0.4
1,068,393	+		Echvi_0929	0.33	+0.6
1,068,393	+		Echvi_0929	0.33	+0.7
1,068,394	-		Echvi_0929	0.33	-0.1
1,068,404	-		Echvi_0929	0.34	-0.3
1,068,490	-		Echvi_0929	0.43	-1.0
1,068,518	+		Echvi_0929	0.46	-0.1
1,068,518	+		Echvi_0929	0.46	-1.6
1,068,518	+		Echvi_0929	0.46	-1.4
1,068,521	+		Echvi_0929	0.46	-1.2
1,068,521	+		Echvi_0929	0.46	+0.0
1,068,620	+		Echvi_0929	0.57	-2.0
1,068,620	+		Echvi_0929	0.57	-0.4
1,068,650	-		Echvi_0929	0.60	+0.4
1,068,669	+		Echvi_0929	0.62	-0.7
1,068,670	-		Echvi_0929	0.62	-2.2
1,068,679	-		Echvi_0929	0.63	-0.1
1,068,761	-		Echvi_0929	0.72	-1.0
1,068,884	+		Echvi_0929	0.85	-1.9
1,068,894	-		Echvi_0929	0.86	+1.6
1,068,894	-		Echvi_0929	0.86	+0.1
1,068,894	-		Echvi_0929	0.86	+0.4
1,068,936	-				-0.3
1,068,939	-				-0.9
1,068,986	-				-0.1
1,069,017	+				-0.7
1,069,030	+				+1.3
1,069,030	+				+0.5
1,069,076	+				+0.4
1,069,076	+				+0.8
1,069,076	+				+1.4