Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4531 and EX28DRAFT_4532 overlap by 4 nucleotides EX28DRAFT_4532 and EX28DRAFT_4533 are separated by 1 nucleotides EX28DRAFT_4533 and EX28DRAFT_4534 overlap by 17 nucleotides EX28DRAFT_4534 and EX28DRAFT_4535 overlap by 14 nucleotides EX28DRAFT_4535 and EX28DRAFT_4536 overlap by 1 nucleotides
EX28DRAFT_4531: EX28DRAFT_4531 - thiazole biosynthesis protein ThiH, at 15,261 to 16,388
_4531
EX28DRAFT_4532: EX28DRAFT_4532 - Uncharacterized enzyme of thiazole biosynthesis, at 16,385 to 17,155
_4532
EX28DRAFT_4533: EX28DRAFT_4533 - thiamine biosynthesis protein ThiS, at 17,157 to 17,357
_4533
EX28DRAFT_4534: EX28DRAFT_4534 - Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2, at 17,341 to 18,096
_4534
EX28DRAFT_4535: EX28DRAFT_4535 - thiamine-phosphate diphosphorylase, at 18,083 to 18,724
_4535
EX28DRAFT_4536: EX28DRAFT_4536 - phosphomethylpyrimidine synthase, at 18,724 to 20,619
_4536
Position (kb) 17
18
19 Strain fitness (log2 ratio) -1
0
1 at 17.015 kb on + strand, within EX28DRAFT_4532 at 17.016 kb on - strand, within EX28DRAFT_4532 at 17.147 kb on - strand at 17.147 kb on - strand at 17.151 kb on - strand at 17.509 kb on + strand, within EX28DRAFT_4534 at 17.671 kb on - strand, within EX28DRAFT_4534 at 18.244 kb on + strand, within EX28DRAFT_4535 at 18.265 kb on + strand, within EX28DRAFT_4535 at 18.351 kb on + strand, within EX28DRAFT_4535 at 18.351 kb on + strand, within EX28DRAFT_4535 at 18.352 kb on - strand, within EX28DRAFT_4535 at 18.352 kb on - strand, within EX28DRAFT_4535 at 18.352 kb on - strand, within EX28DRAFT_4535 at 18.524 kb on - strand, within EX28DRAFT_4535 at 18.687 kb on - strand at 18.720 kb on + strand at 18.720 kb on + strand at 18.720 kb on + strand at 18.720 kb on + strand at 18.720 kb on + strand at 18.721 kb on - strand at 18.721 kb on - strand at 18.721 kb on - strand at 18.721 kb on - strand at 18.725 kb on + strand at 18.726 kb on - strand at 18.746 kb on + strand at 18.873 kb on + strand at 18.874 kb on - strand at 19.070 kb on + strand, within EX28DRAFT_4536
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 17,015 + EX28DRAFT_4532 0.82 -0.1 17,016 - EX28DRAFT_4532 0.82 -0.0 17,147 - +0.2 17,147 - -0.0 17,151 - -0.0 17,509 + EX28DRAFT_4534 0.22 +0.5 17,671 - EX28DRAFT_4534 0.44 -0.0 18,244 + EX28DRAFT_4535 0.25 -1.1 18,265 + EX28DRAFT_4535 0.28 -0.1 18,351 + EX28DRAFT_4535 0.42 -0.4 18,351 + EX28DRAFT_4535 0.42 +0.3 18,352 - EX28DRAFT_4535 0.42 -0.7 18,352 - EX28DRAFT_4535 0.42 -0.6 18,352 - EX28DRAFT_4535 0.42 +0.2 18,524 - EX28DRAFT_4535 0.69 -0.9 18,687 - -0.6 18,720 + +0.1 18,720 + -0.9 18,720 + +0.0 18,720 + -0.2 18,720 + -0.7 18,721 - +0.6 18,721 - -0.5 18,721 - +1.2 18,721 - +0.1 18,725 + -0.5 18,726 - -1.3 18,746 + +0.6 18,873 + +1.6 18,874 - +0.3 19,070 + EX28DRAFT_4536 0.18 +0.6
Or see this region's nucleotide sequence