Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4261 and EX28DRAFT_4262 are separated by 184 nucleotides EX28DRAFT_4262 and EX28DRAFT_4263 are separated by 136 nucleotides EX28DRAFT_4263 and EX28DRAFT_4264 are separated by 82 nucleotides
EX28DRAFT_4261: EX28DRAFT_4261 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 66,324 to 67,307
_4261
EX28DRAFT_4262: EX28DRAFT_4262 - phage shock protein G, at 67,492 to 67,734
_4262
EX28DRAFT_4263: EX28DRAFT_4263 - tRNA dihydrouridine synthase A, at 67,871 to 68,865
_4263
EX28DRAFT_4264: EX28DRAFT_4264 - F plasmid transfer operon, TraF, protein, at 68,948 to 70,258
_4264
Position (kb) 67
68
69 Strain fitness (log2 ratio) -2
-1
0
1
2 at 66.893 kb on + strand, within EX28DRAFT_4261 at 66.893 kb on + strand, within EX28DRAFT_4261 at 66.894 kb on - strand, within EX28DRAFT_4261 at 66.894 kb on - strand, within EX28DRAFT_4261 at 66.897 kb on + strand, within EX28DRAFT_4261 at 66.963 kb on + strand, within EX28DRAFT_4261 at 66.963 kb on + strand, within EX28DRAFT_4261 at 67.077 kb on - strand, within EX28DRAFT_4261 at 67.101 kb on + strand, within EX28DRAFT_4261 at 67.101 kb on + strand, within EX28DRAFT_4261 at 67.102 kb on - strand, within EX28DRAFT_4261 at 67.102 kb on - strand, within EX28DRAFT_4261 at 67.128 kb on + strand, within EX28DRAFT_4261 at 67.210 kb on + strand at 67.211 kb on - strand at 67.211 kb on - strand at 67.365 kb on + strand at 67.365 kb on + strand at 67.366 kb on - strand at 67.369 kb on + strand at 67.369 kb on + strand at 67.374 kb on + strand at 67.406 kb on - strand at 67.420 kb on + strand at 67.424 kb on + strand at 67.425 kb on - strand at 67.464 kb on - strand at 67.470 kb on - strand at 67.489 kb on - strand at 67.489 kb on - strand at 67.583 kb on - strand, within EX28DRAFT_4262 at 67.768 kb on - strand at 68.002 kb on + strand, within EX28DRAFT_4263 at 68.025 kb on + strand, within EX28DRAFT_4263 at 68.025 kb on + strand, within EX28DRAFT_4263 at 68.025 kb on + strand, within EX28DRAFT_4263 at 68.055 kb on + strand, within EX28DRAFT_4263 at 68.055 kb on + strand, within EX28DRAFT_4263 at 68.061 kb on + strand, within EX28DRAFT_4263 at 68.062 kb on - strand, within EX28DRAFT_4263 at 68.155 kb on - strand, within EX28DRAFT_4263 at 68.185 kb on + strand, within EX28DRAFT_4263 at 68.186 kb on - strand, within EX28DRAFT_4263 at 68.689 kb on - strand, within EX28DRAFT_4263 at 68.689 kb on - strand, within EX28DRAFT_4263 at 68.698 kb on - strand, within EX28DRAFT_4263 at 68.745 kb on - strand, within EX28DRAFT_4263 at 68.755 kb on - strand, within EX28DRAFT_4263 at 68.781 kb on - strand at 68.852 kb on - strand at 68.876 kb on + strand at 68.904 kb on + strand at 68.904 kb on + strand at 68.905 kb on - strand at 68.905 kb on - strand at 68.905 kb on - strand at 68.906 kb on + strand at 68.949 kb on + strand at 68.950 kb on - strand at 69.000 kb on + strand at 69.107 kb on + strand, within EX28DRAFT_4264 at 69.131 kb on - strand, within EX28DRAFT_4264 at 69.163 kb on + strand, within EX28DRAFT_4264 at 69.163 kb on + strand, within EX28DRAFT_4264 at 69.163 kb on + strand, within EX28DRAFT_4264 at 69.164 kb on - strand, within EX28DRAFT_4264 at 69.271 kb on - strand, within EX28DRAFT_4264 at 69.281 kb on - strand, within EX28DRAFT_4264 at 69.282 kb on + strand, within EX28DRAFT_4264 at 69.283 kb on - strand, within EX28DRAFT_4264 at 69.283 kb on - strand, within EX28DRAFT_4264 at 69.477 kb on + strand, within EX28DRAFT_4264 at 69.492 kb on + strand, within EX28DRAFT_4264 at 69.493 kb on - strand, within EX28DRAFT_4264 at 69.493 kb on - strand, within EX28DRAFT_4264 at 69.496 kb on + strand, within EX28DRAFT_4264 at 69.496 kb on + strand, within EX28DRAFT_4264 at 69.497 kb on - strand, within EX28DRAFT_4264 at 69.498 kb on + strand, within EX28DRAFT_4264 at 69.498 kb on + strand, within EX28DRAFT_4264 at 69.498 kb on + strand, within EX28DRAFT_4264 at 69.498 kb on + strand, within EX28DRAFT_4264 at 69.499 kb on - strand, within EX28DRAFT_4264 at 69.499 kb on - strand, within EX28DRAFT_4264 at 69.499 kb on - strand, within EX28DRAFT_4264 at 69.499 kb on - strand, within EX28DRAFT_4264 at 69.499 kb on - strand, within EX28DRAFT_4264 at 69.499 kb on - strand, within EX28DRAFT_4264 at 69.717 kb on + strand, within EX28DRAFT_4264 at 69.718 kb on - strand, within EX28DRAFT_4264
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 66,893 + EX28DRAFT_4261 0.58 -0.7 66,893 + EX28DRAFT_4261 0.58 -0.2 66,894 - EX28DRAFT_4261 0.58 -0.1 66,894 - EX28DRAFT_4261 0.58 +0.3 66,897 + EX28DRAFT_4261 0.58 -0.3 66,963 + EX28DRAFT_4261 0.65 +0.1 66,963 + EX28DRAFT_4261 0.65 +2.1 67,077 - EX28DRAFT_4261 0.77 -0.8 67,101 + EX28DRAFT_4261 0.79 +0.4 67,101 + EX28DRAFT_4261 0.79 -0.4 67,102 - EX28DRAFT_4261 0.79 +0.2 67,102 - EX28DRAFT_4261 0.79 +0.8 67,128 + EX28DRAFT_4261 0.82 +0.5 67,210 + +0.5 67,211 - +2.1 67,211 - -0.2 67,365 + -0.4 67,365 + +0.9 67,366 - -0.2 67,369 + -0.5 67,369 + -0.5 67,374 + -0.4 67,406 - +0.2 67,420 + -1.2 67,424 + -0.7 67,425 - -0.3 67,464 - +0.6 67,470 - -0.6 67,489 - +0.0 67,489 - -1.1 67,583 - EX28DRAFT_4262 0.37 -0.1 67,768 - +0.0 68,002 + EX28DRAFT_4263 0.13 -0.3 68,025 + EX28DRAFT_4263 0.15 -0.9 68,025 + EX28DRAFT_4263 0.15 -0.1 68,025 + EX28DRAFT_4263 0.15 -1.0 68,055 + EX28DRAFT_4263 0.18 -0.6 68,055 + EX28DRAFT_4263 0.18 +0.4 68,061 + EX28DRAFT_4263 0.19 -0.1 68,062 - EX28DRAFT_4263 0.19 -0.9 68,155 - EX28DRAFT_4263 0.29 +0.4 68,185 + EX28DRAFT_4263 0.32 -0.1 68,186 - EX28DRAFT_4263 0.32 -0.4 68,689 - EX28DRAFT_4263 0.82 -0.1 68,689 - EX28DRAFT_4263 0.82 +0.5 68,698 - EX28DRAFT_4263 0.83 +0.2 68,745 - EX28DRAFT_4263 0.88 -1.0 68,755 - EX28DRAFT_4263 0.89 -0.1 68,781 - -0.7 68,852 - -0.9 68,876 + +0.2 68,904 + +1.0 68,904 + -0.4 68,905 - +0.7 68,905 - -0.2 68,905 - +0.4 68,906 + +0.3 68,949 + -0.2 68,950 - -0.6 69,000 + -0.2 69,107 + EX28DRAFT_4264 0.12 +0.5 69,131 - EX28DRAFT_4264 0.14 -0.4 69,163 + EX28DRAFT_4264 0.16 +0.1 69,163 + EX28DRAFT_4264 0.16 -1.9 69,163 + EX28DRAFT_4264 0.16 -0.3 69,164 - EX28DRAFT_4264 0.16 -0.3 69,271 - EX28DRAFT_4264 0.25 +0.2 69,281 - EX28DRAFT_4264 0.25 -0.5 69,282 + EX28DRAFT_4264 0.25 +0.5 69,283 - EX28DRAFT_4264 0.26 +0.0 69,283 - EX28DRAFT_4264 0.26 -0.1 69,477 + EX28DRAFT_4264 0.40 -1.0 69,492 + EX28DRAFT_4264 0.41 -0.3 69,493 - EX28DRAFT_4264 0.42 +0.5 69,493 - EX28DRAFT_4264 0.42 -0.3 69,496 + EX28DRAFT_4264 0.42 +0.2 69,496 + EX28DRAFT_4264 0.42 -0.5 69,497 - EX28DRAFT_4264 0.42 -0.9 69,498 + EX28DRAFT_4264 0.42 -0.2 69,498 + EX28DRAFT_4264 0.42 -0.3 69,498 + EX28DRAFT_4264 0.42 -0.0 69,498 + EX28DRAFT_4264 0.42 +0.1 69,499 - EX28DRAFT_4264 0.42 +0.2 69,499 - EX28DRAFT_4264 0.42 +0.4 69,499 - EX28DRAFT_4264 0.42 -0.5 69,499 - EX28DRAFT_4264 0.42 -0.4 69,499 - EX28DRAFT_4264 0.42 +0.3 69,499 - EX28DRAFT_4264 0.42 -0.9 69,717 + EX28DRAFT_4264 0.59 +1.0 69,718 - EX28DRAFT_4264 0.59 +0.5
Or see this region's nucleotide sequence