Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4226 and EX28DRAFT_4228 are separated by 175 nucleotides EX28DRAFT_4228 and EX28DRAFT_4229 overlap by 3 nucleotides EX28DRAFT_4229 and EX28DRAFT_4230 are separated by 121 nucleotides
EX28DRAFT_4226: EX28DRAFT_4226 - formate dehydrogenase alpha subunit (EC 1.2.1.2), at 32,467 to 34,614
_4226
EX28DRAFT_4228: EX28DRAFT_4228 - RNA, at 34,790 to 34,940
_4228
EX28DRAFT_4229: EX28DRAFT_4229 - Hok/gef family, at 34,938 to 35,090
_4229
EX28DRAFT_4230: EX28DRAFT_4230 - Sel1 repeat, at 35,212 to 35,886
_4230
Position (kb) 34
35 Strain fitness (log2 ratio) -1
0
1 at 34.004 kb on - strand at 34.015 kb on + strand at 34.039 kb on + strand at 34.090 kb on + strand at 34.099 kb on - strand at 34.183 kb on + strand at 34.286 kb on - strand at 34.426 kb on + strand at 34.427 kb on - strand at 34.427 kb on - strand at 34.472 kb on + strand at 34.472 kb on + strand at 34.472 kb on + strand at 34.473 kb on - strand at 34.500 kb on + strand at 34.501 kb on - strand at 34.555 kb on + strand at 34.555 kb on + strand at 34.570 kb on + strand at 34.572 kb on + strand at 34.650 kb on + strand at 34.930 kb on + strand at 34.930 kb on + strand at 34.974 kb on - strand, within EX28DRAFT_4229 at 35.142 kb on + strand at 35.176 kb on + strand at 35.177 kb on - strand at 35.203 kb on + strand at 35.204 kb on - strand at 35.221 kb on - strand at 35.244 kb on + strand at 35.323 kb on + strand, within EX28DRAFT_4230 at 35.334 kb on + strand, within EX28DRAFT_4230 at 35.335 kb on - strand, within EX28DRAFT_4230 at 35.338 kb on + strand, within EX28DRAFT_4230 at 35.339 kb on - strand, within EX28DRAFT_4230 at 35.339 kb on - strand, within EX28DRAFT_4230 at 35.339 kb on - strand, within EX28DRAFT_4230 at 35.339 kb on - strand, within EX28DRAFT_4230 at 35.339 kb on - strand, within EX28DRAFT_4230 at 35.339 kb on - strand, within EX28DRAFT_4230 at 35.339 kb on - strand, within EX28DRAFT_4230 at 35.339 kb on - strand, within EX28DRAFT_4230 at 35.463 kb on + strand, within EX28DRAFT_4230 at 35.622 kb on - strand, within EX28DRAFT_4230 at 35.784 kb on + strand, within EX28DRAFT_4230
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 34,004 - +0.3 34,015 + +0.2 34,039 + +0.3 34,090 + -0.5 34,099 - -0.1 34,183 + +0.2 34,286 - -0.2 34,426 + +0.2 34,427 - -1.4 34,427 - +0.2 34,472 + -1.6 34,472 + +0.3 34,472 + -0.3 34,473 - -0.6 34,500 + +0.4 34,501 - +0.3 34,555 + +0.3 34,555 + +1.6 34,570 + -1.0 34,572 + +0.1 34,650 + +0.2 34,930 + +0.4 34,930 + +0.6 34,974 - EX28DRAFT_4229 0.24 +0.3 35,142 + +0.3 35,176 + -0.2 35,177 - +0.3 35,203 + -0.0 35,204 - +0.4 35,221 - -0.2 35,244 + +0.2 35,323 + EX28DRAFT_4230 0.16 +0.5 35,334 + EX28DRAFT_4230 0.18 -1.1 35,335 - EX28DRAFT_4230 0.18 -0.1 35,338 + EX28DRAFT_4230 0.19 -0.2 35,339 - EX28DRAFT_4230 0.19 -0.7 35,339 - EX28DRAFT_4230 0.19 +1.1 35,339 - EX28DRAFT_4230 0.19 -0.1 35,339 - EX28DRAFT_4230 0.19 -1.6 35,339 - EX28DRAFT_4230 0.19 +0.9 35,339 - EX28DRAFT_4230 0.19 -0.8 35,339 - EX28DRAFT_4230 0.19 -0.1 35,339 - EX28DRAFT_4230 0.19 -0.7 35,463 + EX28DRAFT_4230 0.37 -0.2 35,622 - EX28DRAFT_4230 0.61 -0.5 35,784 + EX28DRAFT_4230 0.85 -0.6
Or see this region's nucleotide sequence