Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4130 and EX28DRAFT_4131 are separated by 111 nucleotides EX28DRAFT_4131 and EX28DRAFT_4132 are separated by 33 nucleotides EX28DRAFT_4132 and EX28DRAFT_4133 are separated by 10 nucleotides
EX28DRAFT_4130: EX28DRAFT_4130 - pimelyl-[acyl-carrier protein] methyl ester esterase, at 110,268 to 111,041
_4130
EX28DRAFT_4131: EX28DRAFT_4131 - Protein of unknown function (DUF1471), at 111,153 to 111,422
_4131
EX28DRAFT_4132: EX28DRAFT_4132 - FeoC like transcriptional regulator, at 111,456 to 111,692
_4132
EX28DRAFT_4133: EX28DRAFT_4133 - ferrous iron transporter FeoB, at 111,703 to 114,021
_4133
Position (kb)
111
112 Strain fitness (log2 ratio)
-1
0
1
2
3 at 110.687 kb on - strand, within EX28DRAFT_4130 at 110.870 kb on + strand, within EX28DRAFT_4130 at 110.874 kb on + strand, within EX28DRAFT_4130 at 110.874 kb on + strand, within EX28DRAFT_4130 at 110.875 kb on - strand, within EX28DRAFT_4130 at 110.875 kb on - strand, within EX28DRAFT_4130 at 110.875 kb on - strand, within EX28DRAFT_4130 at 110.875 kb on - strand, within EX28DRAFT_4130 at 110.981 kb on + strand at 110.981 kb on + strand at 110.982 kb on - strand at 111.085 kb on - strand at 111.114 kb on + strand at 111.354 kb on + strand, within EX28DRAFT_4131 at 111.355 kb on - strand, within EX28DRAFT_4131 at 111.355 kb on - strand, within EX28DRAFT_4131 at 111.357 kb on + strand, within EX28DRAFT_4131 at 111.357 kb on + strand, within EX28DRAFT_4131 at 111.357 kb on + strand, within EX28DRAFT_4131 at 111.358 kb on - strand, within EX28DRAFT_4131 at 111.414 kb on + strand at 111.414 kb on + strand at 111.415 kb on - strand at 111.421 kb on - strand at 111.421 kb on - strand at 111.421 kb on - strand at 111.421 kb on - strand at 111.423 kb on + strand at 111.424 kb on - strand at 111.480 kb on + strand, within EX28DRAFT_4132 at 111.510 kb on - strand, within EX28DRAFT_4132 at 111.510 kb on - strand, within EX28DRAFT_4132 at 111.510 kb on - strand, within EX28DRAFT_4132 at 111.840 kb on + strand at 111.840 kb on + strand at 111.919 kb on + strand at 112.022 kb on + strand, within EX28DRAFT_4133 at 112.022 kb on + strand, within EX28DRAFT_4133 at 112.028 kb on + strand, within EX28DRAFT_4133 at 112.401 kb on + strand, within EX28DRAFT_4133 at 112.548 kb on - strand, within EX28DRAFT_4133 at 112.623 kb on + strand, within EX28DRAFT_4133
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 110,687 - EX28DRAFT_4130 0.54 -0.0 110,870 + EX28DRAFT_4130 0.78 +3.1 110,874 + EX28DRAFT_4130 0.78 -0.9 110,874 + EX28DRAFT_4130 0.78 -0.5 110,875 - EX28DRAFT_4130 0.78 -1.7 110,875 - EX28DRAFT_4130 0.78 -0.7 110,875 - EX28DRAFT_4130 0.78 -0.6 110,875 - EX28DRAFT_4130 0.78 +0.2 110,981 + +0.0 110,981 + -0.7 110,982 - -0.5 111,085 - +0.0 111,114 + -0.5 111,354 + EX28DRAFT_4131 0.74 -0.7 111,355 - EX28DRAFT_4131 0.75 +0.1 111,355 - EX28DRAFT_4131 0.75 -1.0 111,357 + EX28DRAFT_4131 0.76 -0.2 111,357 + EX28DRAFT_4131 0.76 +0.3 111,357 + EX28DRAFT_4131 0.76 +0.9 111,358 - EX28DRAFT_4131 0.76 +0.0 111,414 + -0.2 111,414 + +0.1 111,415 - -0.1 111,421 - -0.2 111,421 - -0.5 111,421 - -0.2 111,421 - +0.3 111,423 + +0.4 111,424 - -0.2 111,480 + EX28DRAFT_4132 0.10 +0.1 111,510 - EX28DRAFT_4132 0.23 +0.7 111,510 - EX28DRAFT_4132 0.23 +0.7 111,510 - EX28DRAFT_4132 0.23 -0.2 111,840 + +0.6 111,840 + +0.5 111,919 + +0.7 112,022 + EX28DRAFT_4133 0.14 +0.7 112,022 + EX28DRAFT_4133 0.14 +0.2 112,028 + EX28DRAFT_4133 0.14 +0.6 112,401 + EX28DRAFT_4133 0.30 +0.3 112,548 - EX28DRAFT_4133 0.36 +0.4 112,623 + EX28DRAFT_4133 0.40 -0.2
Or see this region's nucleotide sequence