Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4124 and EX28DRAFT_4125 are separated by 585 nucleotides EX28DRAFT_4125 and EX28DRAFT_4126 are separated by 9 nucleotides
EX28DRAFT_4124: EX28DRAFT_4124 - ATP-dependent transcriptional regulator, at 99,369 to 102,074
_4124
EX28DRAFT_4125: EX28DRAFT_4125 - glycogen/starch/alpha-glucan phosphorylases, at 102,660 to 105,053
_4125
EX28DRAFT_4126: EX28DRAFT_4126 - 4-alpha-glucanotransferase, at 105,063 to 107,141
_4126
Position (kb)
102
103
104
105
106 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 101.687 kb on - strand, within EX28DRAFT_4124 at 101.704 kb on + strand, within EX28DRAFT_4124 at 101.705 kb on - strand, within EX28DRAFT_4124 at 101.830 kb on - strand at 101.845 kb on + strand at 101.846 kb on - strand at 101.846 kb on - strand at 101.984 kb on + strand at 101.985 kb on - strand at 102.029 kb on + strand at 102.029 kb on + strand at 102.030 kb on - strand at 102.030 kb on - strand at 102.074 kb on + strand at 102.074 kb on + strand at 102.074 kb on + strand at 102.075 kb on - strand at 102.139 kb on - strand at 102.140 kb on + strand at 102.140 kb on + strand at 102.141 kb on - strand at 102.141 kb on - strand at 102.141 kb on - strand at 102.141 kb on - strand at 102.141 kb on - strand at 102.141 kb on - strand at 102.162 kb on + strand at 102.162 kb on + strand at 102.162 kb on + strand at 102.163 kb on - strand at 102.320 kb on + strand at 102.320 kb on + strand at 102.321 kb on - strand at 102.321 kb on - strand at 102.365 kb on + strand at 102.368 kb on + strand at 102.368 kb on + strand at 102.368 kb on + strand at 102.491 kb on - strand at 102.512 kb on + strand at 102.512 kb on + strand at 102.512 kb on + strand at 102.512 kb on + strand at 102.543 kb on + strand at 102.617 kb on + strand at 102.672 kb on - strand at 102.824 kb on + strand at 102.849 kb on + strand at 102.849 kb on + strand at 102.849 kb on + strand at 102.849 kb on + strand at 102.849 kb on + strand at 102.849 kb on + strand at 102.849 kb on + strand at 102.850 kb on - strand at 102.850 kb on - strand at 102.850 kb on - strand at 102.850 kb on - strand at 102.913 kb on - strand, within EX28DRAFT_4125 at 102.950 kb on + strand, within EX28DRAFT_4125 at 102.950 kb on + strand, within EX28DRAFT_4125 at 102.951 kb on - strand, within EX28DRAFT_4125 at 103.037 kb on + strand, within EX28DRAFT_4125 at 103.080 kb on + strand, within EX28DRAFT_4125 at 103.086 kb on + strand, within EX28DRAFT_4125 at 103.154 kb on + strand, within EX28DRAFT_4125 at 103.159 kb on - strand, within EX28DRAFT_4125 at 103.479 kb on + strand, within EX28DRAFT_4125 at 103.480 kb on - strand, within EX28DRAFT_4125 at 103.480 kb on - strand, within EX28DRAFT_4125 at 103.686 kb on + strand, within EX28DRAFT_4125 at 103.796 kb on + strand, within EX28DRAFT_4125 at 103.796 kb on + strand, within EX28DRAFT_4125 at 104.069 kb on + strand, within EX28DRAFT_4125 at 104.316 kb on + strand, within EX28DRAFT_4125 at 104.397 kb on + strand, within EX28DRAFT_4125 at 104.429 kb on + strand, within EX28DRAFT_4125 at 104.678 kb on + strand, within EX28DRAFT_4125 at 104.678 kb on + strand, within EX28DRAFT_4125 at 104.679 kb on - strand, within EX28DRAFT_4125 at 104.679 kb on - strand, within EX28DRAFT_4125 at 104.679 kb on - strand, within EX28DRAFT_4125 at 104.733 kb on + strand, within EX28DRAFT_4125 at 104.805 kb on + strand, within EX28DRAFT_4125 at 104.905 kb on + strand at 104.906 kb on - strand at 104.906 kb on - strand at 104.906 kb on - strand at 104.906 kb on - strand at 104.935 kb on - strand at 105.033 kb on - strand at 105.121 kb on + strand at 105.121 kb on + strand at 105.122 kb on - strand at 105.146 kb on + strand at 105.454 kb on - strand, within EX28DRAFT_4126 at 105.510 kb on + strand, within EX28DRAFT_4126 at 105.510 kb on + strand, within EX28DRAFT_4126 at 105.511 kb on - strand, within EX28DRAFT_4126 at 105.531 kb on - strand, within EX28DRAFT_4126 at 105.531 kb on - strand, within EX28DRAFT_4126 at 105.660 kb on + strand, within EX28DRAFT_4126 at 105.697 kb on - strand, within EX28DRAFT_4126 at 105.716 kb on - strand, within EX28DRAFT_4126 at 105.936 kb on + strand, within EX28DRAFT_4126 at 105.970 kb on - strand, within EX28DRAFT_4126
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 101,687 - EX28DRAFT_4124 0.86 +0.6 101,704 + EX28DRAFT_4124 0.86 +0.0 101,705 - EX28DRAFT_4124 0.86 -0.5 101,830 - +0.2 101,845 + -0.1 101,846 - -0.2 101,846 - -0.5 101,984 + -0.2 101,985 - +0.4 102,029 + +0.4 102,029 + -1.2 102,030 - -1.0 102,030 - -0.1 102,074 + +0.0 102,074 + -0.6 102,074 + -0.2 102,075 - +0.9 102,139 - +0.9 102,140 + -0.0 102,140 + -0.9 102,141 - -0.7 102,141 - +0.6 102,141 - -0.1 102,141 - -0.1 102,141 - +0.0 102,141 - +0.2 102,162 + -0.6 102,162 + +0.2 102,162 + +1.0 102,163 - +0.6 102,320 + +0.4 102,320 + -0.9 102,321 - -0.8 102,321 - +1.1 102,365 + -0.5 102,368 + -1.9 102,368 + +0.6 102,368 + -0.8 102,491 - +0.1 102,512 + +0.3 102,512 + +0.5 102,512 + -0.4 102,512 + -1.6 102,543 + +0.3 102,617 + -0.7 102,672 - -0.7 102,824 + +0.4 102,849 + -0.4 102,849 + +0.1 102,849 + +1.4 102,849 + -1.5 102,849 + +0.8 102,849 + -0.2 102,849 + +0.0 102,850 - +0.9 102,850 - +0.2 102,850 - -0.3 102,850 - -0.3 102,913 - EX28DRAFT_4125 0.11 +0.3 102,950 + EX28DRAFT_4125 0.12 +1.7 102,950 + EX28DRAFT_4125 0.12 +0.6 102,951 - EX28DRAFT_4125 0.12 -0.3 103,037 + EX28DRAFT_4125 0.16 -1.0 103,080 + EX28DRAFT_4125 0.18 -0.8 103,086 + EX28DRAFT_4125 0.18 +0.2 103,154 + EX28DRAFT_4125 0.21 -0.5 103,159 - EX28DRAFT_4125 0.21 +0.1 103,479 + EX28DRAFT_4125 0.34 +0.1 103,480 - EX28DRAFT_4125 0.34 +2.0 103,480 - EX28DRAFT_4125 0.34 +0.2 103,686 + EX28DRAFT_4125 0.43 -0.5 103,796 + EX28DRAFT_4125 0.47 -0.3 103,796 + EX28DRAFT_4125 0.47 -0.0 104,069 + EX28DRAFT_4125 0.59 +0.2 104,316 + EX28DRAFT_4125 0.69 -0.1 104,397 + EX28DRAFT_4125 0.73 +2.0 104,429 + EX28DRAFT_4125 0.74 -0.2 104,678 + EX28DRAFT_4125 0.84 -0.1 104,678 + EX28DRAFT_4125 0.84 -0.4 104,679 - EX28DRAFT_4125 0.84 -0.3 104,679 - EX28DRAFT_4125 0.84 -0.4 104,679 - EX28DRAFT_4125 0.84 +0.1 104,733 + EX28DRAFT_4125 0.87 -0.3 104,805 + EX28DRAFT_4125 0.90 -0.3 104,905 + +0.0 104,906 - +0.4 104,906 - +0.2 104,906 - +0.3 104,906 - -0.7 104,935 - -0.5 105,033 - -1.1 105,121 + +0.4 105,121 + -0.1 105,122 - +1.4 105,146 + +0.8 105,454 - EX28DRAFT_4126 0.19 +0.2 105,510 + EX28DRAFT_4126 0.22 +0.1 105,510 + EX28DRAFT_4126 0.22 +0.6 105,511 - EX28DRAFT_4126 0.22 -0.1 105,531 - EX28DRAFT_4126 0.23 -0.5 105,531 - EX28DRAFT_4126 0.23 -0.9 105,660 + EX28DRAFT_4126 0.29 -0.1 105,697 - EX28DRAFT_4126 0.30 +0.4 105,716 - EX28DRAFT_4126 0.31 +0.5 105,936 + EX28DRAFT_4126 0.42 -1.0 105,970 - EX28DRAFT_4126 0.44 +0.4
Or see this region's nucleotide sequence