Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3807 and EX28DRAFT_3808 are separated by 238 nucleotides EX28DRAFT_3808 and EX28DRAFT_3809 are separated by 154 nucleotides EX28DRAFT_3809 and EX28DRAFT_3810 overlap by 23 nucleotides
EX28DRAFT_3807: EX28DRAFT_3807 - oxalate/formate antiporter family transporter, at 11,103 to 12,305
_3807
EX28DRAFT_3808: EX28DRAFT_3808 - Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion, at 12,544 to 13,242
_3808
EX28DRAFT_3809: EX28DRAFT_3809 - DNA-3-methyladenine glycosylase I (EC 3.2.2.20), at 13,397 to 13,978
_3809
EX28DRAFT_3810: EX28DRAFT_3810 - Acetyltransferase (GNAT) domain, at 13,956 to 14,402
_3810
Position (kb) 12
13
14 Strain fitness (log2 ratio) -1
0
1
2 at 11.611 kb on + strand, within EX28DRAFT_3807 at 11.612 kb on - strand, within EX28DRAFT_3807 at 11.612 kb on - strand, within EX28DRAFT_3807 at 11.612 kb on - strand, within EX28DRAFT_3807 at 11.612 kb on - strand, within EX28DRAFT_3807 at 11.612 kb on - strand, within EX28DRAFT_3807 at 11.612 kb on - strand, within EX28DRAFT_3807 at 11.670 kb on - strand, within EX28DRAFT_3807 at 11.801 kb on + strand, within EX28DRAFT_3807 at 11.801 kb on + strand, within EX28DRAFT_3807 at 11.802 kb on - strand, within EX28DRAFT_3807 at 11.875 kb on + strand, within EX28DRAFT_3807 at 11.875 kb on + strand, within EX28DRAFT_3807 at 12.206 kb on + strand at 12.206 kb on + strand at 12.224 kb on - strand at 12.270 kb on - strand at 12.287 kb on + strand at 12.290 kb on - strand at 12.290 kb on - strand at 12.290 kb on - strand at 12.329 kb on + strand at 12.366 kb on + strand at 12.366 kb on + strand at 12.575 kb on - strand at 12.575 kb on - strand at 12.758 kb on + strand, within EX28DRAFT_3808 at 12.763 kb on - strand, within EX28DRAFT_3808 at 13.006 kb on + strand, within EX28DRAFT_3808 at 13.006 kb on + strand, within EX28DRAFT_3808 at 13.007 kb on - strand, within EX28DRAFT_3808 at 13.007 kb on - strand, within EX28DRAFT_3808 at 13.007 kb on - strand, within EX28DRAFT_3808 at 13.008 kb on + strand, within EX28DRAFT_3808 at 13.009 kb on - strand, within EX28DRAFT_3808 at 13.009 kb on - strand, within EX28DRAFT_3808 at 13.009 kb on - strand, within EX28DRAFT_3808 at 13.048 kb on - strand, within EX28DRAFT_3808 at 13.063 kb on - strand, within EX28DRAFT_3808 at 13.063 kb on - strand, within EX28DRAFT_3808 at 13.098 kb on + strand, within EX28DRAFT_3808 at 13.098 kb on + strand, within EX28DRAFT_3808 at 13.099 kb on - strand, within EX28DRAFT_3808 at 13.099 kb on - strand, within EX28DRAFT_3808 at 13.099 kb on - strand, within EX28DRAFT_3808 at 13.099 kb on - strand, within EX28DRAFT_3808 at 13.116 kb on + strand, within EX28DRAFT_3808 at 13.137 kb on + strand, within EX28DRAFT_3808 at 13.138 kb on - strand, within EX28DRAFT_3808 at 13.139 kb on + strand, within EX28DRAFT_3808 at 13.139 kb on + strand, within EX28DRAFT_3808 at 13.139 kb on + strand, within EX28DRAFT_3808 at 13.139 kb on + strand, within EX28DRAFT_3808 at 13.140 kb on - strand, within EX28DRAFT_3808 at 13.165 kb on - strand, within EX28DRAFT_3808 at 13.165 kb on - strand, within EX28DRAFT_3808 at 13.235 kb on - strand at 13.276 kb on + strand at 13.304 kb on - strand at 13.312 kb on + strand at 13.312 kb on + strand at 13.316 kb on - strand at 13.316 kb on - strand at 13.319 kb on + strand at 13.319 kb on + strand at 13.319 kb on + strand at 13.320 kb on - strand at 13.320 kb on - strand at 13.320 kb on - strand at 13.331 kb on - strand at 13.331 kb on - strand at 13.334 kb on - strand at 13.334 kb on - strand at 13.382 kb on + strand at 13.433 kb on + strand at 13.433 kb on + strand at 13.434 kb on - strand at 13.434 kb on - strand at 13.435 kb on + strand at 13.537 kb on + strand, within EX28DRAFT_3809 at 13.538 kb on - strand, within EX28DRAFT_3809 at 13.892 kb on - strand, within EX28DRAFT_3809 at 14.142 kb on - strand, within EX28DRAFT_3810
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 11,611 + EX28DRAFT_3807 0.42 -0.1 11,612 - EX28DRAFT_3807 0.42 -1.1 11,612 - EX28DRAFT_3807 0.42 +0.3 11,612 - EX28DRAFT_3807 0.42 +0.0 11,612 - EX28DRAFT_3807 0.42 -0.6 11,612 - EX28DRAFT_3807 0.42 -0.1 11,612 - EX28DRAFT_3807 0.42 -0.2 11,670 - EX28DRAFT_3807 0.47 +0.2 11,801 + EX28DRAFT_3807 0.58 -0.9 11,801 + EX28DRAFT_3807 0.58 -0.9 11,802 - EX28DRAFT_3807 0.58 +0.8 11,875 + EX28DRAFT_3807 0.64 -0.1 11,875 + EX28DRAFT_3807 0.64 +0.0 12,206 + -0.6 12,206 + +0.2 12,224 - +0.7 12,270 - +0.1 12,287 + -0.0 12,290 - -0.2 12,290 - +0.3 12,290 - +0.1 12,329 + +0.4 12,366 + +0.0 12,366 + +0.3 12,575 - -0.5 12,575 - +0.3 12,758 + EX28DRAFT_3808 0.31 -0.2 12,763 - EX28DRAFT_3808 0.31 +0.4 13,006 + EX28DRAFT_3808 0.66 -0.2 13,006 + EX28DRAFT_3808 0.66 -0.7 13,007 - EX28DRAFT_3808 0.66 +1.3 13,007 - EX28DRAFT_3808 0.66 -0.1 13,007 - EX28DRAFT_3808 0.66 +0.9 13,008 + EX28DRAFT_3808 0.66 +0.2 13,009 - EX28DRAFT_3808 0.67 -0.0 13,009 - EX28DRAFT_3808 0.67 +0.4 13,009 - EX28DRAFT_3808 0.67 -1.4 13,048 - EX28DRAFT_3808 0.72 +0.1 13,063 - EX28DRAFT_3808 0.74 -0.0 13,063 - EX28DRAFT_3808 0.74 +0.8 13,098 + EX28DRAFT_3808 0.79 +0.3 13,098 + EX28DRAFT_3808 0.79 +0.5 13,099 - EX28DRAFT_3808 0.79 +0.5 13,099 - EX28DRAFT_3808 0.79 -0.1 13,099 - EX28DRAFT_3808 0.79 +0.4 13,099 - EX28DRAFT_3808 0.79 +2.1 13,116 + EX28DRAFT_3808 0.82 +0.1 13,137 + EX28DRAFT_3808 0.85 +0.5 13,138 - EX28DRAFT_3808 0.85 +1.6 13,139 + EX28DRAFT_3808 0.85 +0.3 13,139 + EX28DRAFT_3808 0.85 -0.1 13,139 + EX28DRAFT_3808 0.85 +0.1 13,139 + EX28DRAFT_3808 0.85 +0.2 13,140 - EX28DRAFT_3808 0.85 +1.0 13,165 - EX28DRAFT_3808 0.89 -0.8 13,165 - EX28DRAFT_3808 0.89 -0.4 13,235 - -0.2 13,276 + -1.0 13,304 - +1.3 13,312 + +0.3 13,312 + +0.1 13,316 - +0.5 13,316 - -1.0 13,319 + -0.0 13,319 + -0.2 13,319 + -0.2 13,320 - -0.3 13,320 - -0.6 13,320 - -0.1 13,331 - +0.1 13,331 - +0.4 13,334 - +0.4 13,334 - +0.5 13,382 + -0.2 13,433 + -0.3 13,433 + +0.3 13,434 - -0.1 13,434 - -1.5 13,435 + -0.4 13,537 + EX28DRAFT_3809 0.24 +0.1 13,538 - EX28DRAFT_3809 0.24 -0.8 13,892 - EX28DRAFT_3809 0.85 -0.1 14,142 - EX28DRAFT_3810 0.42 +0.8
Or see this region's nucleotide sequence