Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3774 and EX28DRAFT_3775 are separated by 65 nucleotides EX28DRAFT_3775 and EX28DRAFT_3776 are separated by 58 nucleotides
EX28DRAFT_3774: EX28DRAFT_3774 - Arginine/lysine/ornithine decarboxylases, at 457,148 to 459,280
_3774
EX28DRAFT_3775: EX28DRAFT_3775 - Lactoylglutathione lyase and related lyases, at 459,346 to 459,735
_3775
EX28DRAFT_3776: EX28DRAFT_3776 - tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain, at 459,794 to 461,083
_3776
Position (kb) 459
460 Strain fitness (log2 ratio) -1
0
1 at 458.373 kb on + strand, within EX28DRAFT_3774 at 458.373 kb on + strand, within EX28DRAFT_3774 at 458.374 kb on - strand, within EX28DRAFT_3774 at 458.596 kb on + strand, within EX28DRAFT_3774 at 458.596 kb on + strand, within EX28DRAFT_3774 at 458.597 kb on - strand, within EX28DRAFT_3774 at 458.597 kb on - strand, within EX28DRAFT_3774 at 458.597 kb on - strand, within EX28DRAFT_3774 at 458.597 kb on - strand, within EX28DRAFT_3774 at 458.597 kb on - strand, within EX28DRAFT_3774 at 458.597 kb on - strand, within EX28DRAFT_3774 at 458.739 kb on - strand, within EX28DRAFT_3774 at 458.852 kb on - strand, within EX28DRAFT_3774 at 458.888 kb on + strand, within EX28DRAFT_3774 at 458.986 kb on - strand, within EX28DRAFT_3774 at 459.332 kb on - strand at 459.332 kb on - strand at 459.345 kb on + strand at 459.345 kb on + strand at 459.345 kb on + strand at 459.346 kb on - strand at 459.346 kb on - strand at 459.346 kb on - strand at 459.346 kb on - strand at 459.346 kb on - strand at 459.357 kb on - strand at 459.372 kb on + strand at 459.435 kb on + strand, within EX28DRAFT_3775 at 459.435 kb on + strand, within EX28DRAFT_3775 at 459.436 kb on - strand, within EX28DRAFT_3775 at 459.505 kb on + strand, within EX28DRAFT_3775 at 459.506 kb on - strand, within EX28DRAFT_3775 at 459.506 kb on - strand, within EX28DRAFT_3775 at 459.506 kb on - strand, within EX28DRAFT_3775 at 459.733 kb on + strand at 459.734 kb on - strand at 459.779 kb on + strand at 459.785 kb on + strand at 459.793 kb on + strand at 459.801 kb on + strand at 459.802 kb on - strand at 459.802 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 458,373 + EX28DRAFT_3774 0.57 +0.1 458,373 + EX28DRAFT_3774 0.57 -0.2 458,374 - EX28DRAFT_3774 0.57 +0.1 458,596 + EX28DRAFT_3774 0.68 +0.4 458,596 + EX28DRAFT_3774 0.68 +0.0 458,597 - EX28DRAFT_3774 0.68 -0.3 458,597 - EX28DRAFT_3774 0.68 +0.5 458,597 - EX28DRAFT_3774 0.68 +0.2 458,597 - EX28DRAFT_3774 0.68 -0.3 458,597 - EX28DRAFT_3774 0.68 +0.6 458,597 - EX28DRAFT_3774 0.68 +0.9 458,739 - EX28DRAFT_3774 0.75 -0.1 458,852 - EX28DRAFT_3774 0.80 +0.2 458,888 + EX28DRAFT_3774 0.82 -0.9 458,986 - EX28DRAFT_3774 0.86 +0.1 459,332 - +0.3 459,332 - +0.1 459,345 + -0.3 459,345 + +0.1 459,345 + +0.3 459,346 - +0.7 459,346 - +0.5 459,346 - +0.4 459,346 - -1.5 459,346 - -0.3 459,357 - -1.5 459,372 + -0.1 459,435 + EX28DRAFT_3775 0.23 +1.0 459,435 + EX28DRAFT_3775 0.23 +0.0 459,436 - EX28DRAFT_3775 0.23 +1.6 459,505 + EX28DRAFT_3775 0.41 +1.0 459,506 - EX28DRAFT_3775 0.41 -0.0 459,506 - EX28DRAFT_3775 0.41 -0.0 459,506 - EX28DRAFT_3775 0.41 -0.0 459,733 + -0.4 459,734 - +0.2 459,779 + -1.1 459,785 + -0.6 459,793 + +0.1 459,801 + +1.2 459,802 - +0.7 459,802 - -0.5
Or see this region's nucleotide sequence