Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3394 and EX28DRAFT_3395 are separated by 75 nucleotides EX28DRAFT_3395 and EX28DRAFT_3396 are separated by 48 nucleotides
EX28DRAFT_3394: EX28DRAFT_3394 - Permeases of the drug/metabolite transporter (DMT) superfamily, at 62,287 to 63,252
_3394
EX28DRAFT_3395: EX28DRAFT_3395 - AraC-type DNA-binding domain-containing proteins, at 63,328 to 64,152
_3395
EX28DRAFT_3396: EX28DRAFT_3396 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 64,201 to 65,244
_3396
Position (kb) 63
64
65 Strain fitness (log2 ratio) -1
0
1
2
3 at 62.418 kb on + strand, within EX28DRAFT_3394 at 62.419 kb on - strand, within EX28DRAFT_3394 at 62.419 kb on - strand, within EX28DRAFT_3394 at 62.420 kb on + strand, within EX28DRAFT_3394 at 62.421 kb on - strand, within EX28DRAFT_3394 at 62.421 kb on - strand, within EX28DRAFT_3394 at 62.421 kb on - strand, within EX28DRAFT_3394 at 62.735 kb on + strand, within EX28DRAFT_3394 at 62.736 kb on - strand, within EX28DRAFT_3394 at 62.863 kb on + strand, within EX28DRAFT_3394 at 62.864 kb on - strand, within EX28DRAFT_3394 at 62.916 kb on - strand, within EX28DRAFT_3394 at 62.916 kb on - strand, within EX28DRAFT_3394 at 62.970 kb on + strand, within EX28DRAFT_3394 at 62.970 kb on + strand, within EX28DRAFT_3394 at 63.017 kb on + strand, within EX28DRAFT_3394 at 63.018 kb on - strand, within EX28DRAFT_3394 at 63.020 kb on + strand, within EX28DRAFT_3394 at 63.021 kb on - strand, within EX28DRAFT_3394 at 63.021 kb on - strand, within EX28DRAFT_3394 at 63.021 kb on - strand, within EX28DRAFT_3394 at 63.024 kb on + strand, within EX28DRAFT_3394 at 63.025 kb on - strand, within EX28DRAFT_3394 at 63.025 kb on - strand, within EX28DRAFT_3394 at 63.160 kb on + strand at 63.233 kb on + strand at 63.233 kb on + strand at 63.233 kb on + strand at 63.234 kb on - strand at 63.234 kb on - strand at 63.234 kb on - strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.235 kb on + strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.236 kb on - strand at 63.246 kb on + strand at 63.269 kb on - strand at 63.269 kb on - strand at 63.272 kb on + strand at 63.272 kb on + strand at 63.272 kb on + strand at 63.273 kb on - strand at 63.288 kb on + strand at 63.288 kb on + strand at 63.289 kb on - strand at 63.289 kb on - strand at 63.314 kb on + strand at 63.367 kb on - strand at 63.397 kb on + strand at 63.397 kb on + strand at 63.603 kb on + strand, within EX28DRAFT_3395 at 63.605 kb on + strand, within EX28DRAFT_3395 at 63.605 kb on + strand, within EX28DRAFT_3395 at 63.605 kb on + strand, within EX28DRAFT_3395 at 63.606 kb on - strand, within EX28DRAFT_3395 at 63.606 kb on - strand, within EX28DRAFT_3395 at 63.606 kb on - strand, within EX28DRAFT_3395 at 63.621 kb on - strand, within EX28DRAFT_3395 at 63.712 kb on + strand, within EX28DRAFT_3395 at 63.811 kb on - strand, within EX28DRAFT_3395 at 63.863 kb on + strand, within EX28DRAFT_3395 at 63.863 kb on + strand, within EX28DRAFT_3395 at 63.863 kb on + strand, within EX28DRAFT_3395 at 63.863 kb on + strand, within EX28DRAFT_3395 at 63.934 kb on - strand, within EX28DRAFT_3395 at 64.056 kb on + strand, within EX28DRAFT_3395 at 64.057 kb on - strand, within EX28DRAFT_3395 at 64.129 kb on - strand at 64.234 kb on - strand at 64.264 kb on - strand at 64.385 kb on - strand, within EX28DRAFT_3396 at 64.497 kb on + strand, within EX28DRAFT_3396 at 64.562 kb on + strand, within EX28DRAFT_3396 at 64.627 kb on - strand, within EX28DRAFT_3396 at 64.701 kb on + strand, within EX28DRAFT_3396 at 64.702 kb on - strand, within EX28DRAFT_3396 at 64.952 kb on + strand, within EX28DRAFT_3396 at 64.952 kb on + strand, within EX28DRAFT_3396 at 64.952 kb on + strand, within EX28DRAFT_3396 at 64.956 kb on + strand, within EX28DRAFT_3396 at 64.956 kb on + strand, within EX28DRAFT_3396 at 64.986 kb on + strand, within EX28DRAFT_3396 at 64.987 kb on - strand, within EX28DRAFT_3396 at 64.987 kb on - strand, within EX28DRAFT_3396 at 64.987 kb on - strand, within EX28DRAFT_3396 at 65.004 kb on + strand, within EX28DRAFT_3396 at 65.005 kb on - strand, within EX28DRAFT_3396 at 65.039 kb on - strand, within EX28DRAFT_3396 at 65.050 kb on - strand, within EX28DRAFT_3396 at 65.064 kb on + strand, within EX28DRAFT_3396 at 65.065 kb on - strand, within EX28DRAFT_3396 at 65.144 kb on - strand at 65.148 kb on - strand at 65.148 kb on - strand at 65.151 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 62,418 + EX28DRAFT_3394 0.14 +0.0 62,419 - EX28DRAFT_3394 0.14 -0.8 62,419 - EX28DRAFT_3394 0.14 +0.1 62,420 + EX28DRAFT_3394 0.14 +0.3 62,421 - EX28DRAFT_3394 0.14 -0.4 62,421 - EX28DRAFT_3394 0.14 -0.1 62,421 - EX28DRAFT_3394 0.14 -0.8 62,735 + EX28DRAFT_3394 0.46 +1.2 62,736 - EX28DRAFT_3394 0.46 +0.2 62,863 + EX28DRAFT_3394 0.60 -0.2 62,864 - EX28DRAFT_3394 0.60 -0.3 62,916 - EX28DRAFT_3394 0.65 -0.3 62,916 - EX28DRAFT_3394 0.65 +0.4 62,970 + EX28DRAFT_3394 0.71 +0.2 62,970 + EX28DRAFT_3394 0.71 +0.2 63,017 + EX28DRAFT_3394 0.76 -0.6 63,018 - EX28DRAFT_3394 0.76 -0.2 63,020 + EX28DRAFT_3394 0.76 -0.5 63,021 - EX28DRAFT_3394 0.76 -0.2 63,021 - EX28DRAFT_3394 0.76 +0.4 63,021 - EX28DRAFT_3394 0.76 -0.4 63,024 + EX28DRAFT_3394 0.76 +0.3 63,025 - EX28DRAFT_3394 0.76 -0.8 63,025 - EX28DRAFT_3394 0.76 -0.5 63,160 + -1.1 63,233 + -0.8 63,233 + -0.5 63,233 + -0.6 63,234 - -0.2 63,234 - -1.7 63,234 - +0.4 63,235 + +1.7 63,235 + +0.1 63,235 + +0.1 63,235 + +0.8 63,235 + +1.1 63,236 - +1.7 63,236 - -1.5 63,236 - +0.1 63,236 - +0.5 63,246 + +0.2 63,269 - +0.3 63,269 - -0.1 63,272 + +1.0 63,272 + -0.0 63,272 + -0.5 63,273 - -0.3 63,288 + -0.2 63,288 + -0.0 63,289 - +0.2 63,289 - -0.8 63,314 + +0.5 63,367 - -0.1 63,397 + +0.2 63,397 + -0.4 63,603 + EX28DRAFT_3395 0.33 +0.7 63,605 + EX28DRAFT_3395 0.34 -0.0 63,605 + EX28DRAFT_3395 0.34 +0.5 63,605 + EX28DRAFT_3395 0.34 -0.0 63,606 - EX28DRAFT_3395 0.34 +0.1 63,606 - EX28DRAFT_3395 0.34 +1.1 63,606 - EX28DRAFT_3395 0.34 -0.6 63,621 - EX28DRAFT_3395 0.36 -1.4 63,712 + EX28DRAFT_3395 0.47 +0.5 63,811 - EX28DRAFT_3395 0.59 +0.1 63,863 + EX28DRAFT_3395 0.65 -0.2 63,863 + EX28DRAFT_3395 0.65 -0.3 63,863 + EX28DRAFT_3395 0.65 +0.7 63,863 + EX28DRAFT_3395 0.65 +0.1 63,934 - EX28DRAFT_3395 0.73 +0.7 64,056 + EX28DRAFT_3395 0.88 +0.3 64,057 - EX28DRAFT_3395 0.88 +0.8 64,129 - -0.3 64,234 - +0.8 64,264 - -0.6 64,385 - EX28DRAFT_3396 0.18 +0.3 64,497 + EX28DRAFT_3396 0.28 -0.3 64,562 + EX28DRAFT_3396 0.35 +0.0 64,627 - EX28DRAFT_3396 0.41 -0.5 64,701 + EX28DRAFT_3396 0.48 +3.0 64,702 - EX28DRAFT_3396 0.48 +0.1 64,952 + EX28DRAFT_3396 0.72 +0.9 64,952 + EX28DRAFT_3396 0.72 -0.4 64,952 + EX28DRAFT_3396 0.72 -0.3 64,956 + EX28DRAFT_3396 0.72 +0.4 64,956 + EX28DRAFT_3396 0.72 +2.0 64,986 + EX28DRAFT_3396 0.75 +2.0 64,987 - EX28DRAFT_3396 0.75 +1.0 64,987 - EX28DRAFT_3396 0.75 +0.5 64,987 - EX28DRAFT_3396 0.75 -0.9 65,004 + EX28DRAFT_3396 0.77 -1.0 65,005 - EX28DRAFT_3396 0.77 -0.4 65,039 - EX28DRAFT_3396 0.80 -0.2 65,050 - EX28DRAFT_3396 0.81 -1.2 65,064 + EX28DRAFT_3396 0.83 +0.6 65,065 - EX28DRAFT_3396 0.83 -0.3 65,144 - +0.2 65,148 - +0.2 65,148 - +0.1 65,151 + +0.1
Or see this region's nucleotide sequence