Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2794 and EX28DRAFT_2795 are separated by 67 nucleotides EX28DRAFT_2795 and EX28DRAFT_2796 are separated by 63 nucleotides EX28DRAFT_2796 and EX28DRAFT_2797 overlap by 8 nucleotides EX28DRAFT_2797 and EX28DRAFT_2798 overlap by 4 nucleotides
EX28DRAFT_2794: EX28DRAFT_2794 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 96,960 to 97,739
_2794
EX28DRAFT_2795: EX28DRAFT_2795 - Glucitol operon activator, at 97,807 to 98,166
_2795
EX28DRAFT_2796: EX28DRAFT_2796 - transcriptional regulator, DeoR family, at 98,230 to 99,003
_2796
EX28DRAFT_2797: EX28DRAFT_2797 - KpsF/GutQ family protein, at 98,996 to 99,961
_2797
EX28DRAFT_2798: EX28DRAFT_2798 - Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains, at 99,958 to 101,472
_2798
Position (kb) 98
99
100 Strain fitness (log2 ratio) -1
0
1 at 97.409 kb on + strand, within EX28DRAFT_2794 at 97.409 kb on + strand, within EX28DRAFT_2794 at 97.409 kb on + strand, within EX28DRAFT_2794 at 97.410 kb on - strand, within EX28DRAFT_2794 at 97.558 kb on - strand, within EX28DRAFT_2794 at 97.602 kb on + strand, within EX28DRAFT_2794 at 97.602 kb on + strand, within EX28DRAFT_2794 at 97.603 kb on - strand, within EX28DRAFT_2794 at 97.603 kb on - strand, within EX28DRAFT_2794 at 97.603 kb on - strand, within EX28DRAFT_2794 at 97.603 kb on - strand, within EX28DRAFT_2794 at 97.638 kb on + strand, within EX28DRAFT_2794 at 97.639 kb on - strand, within EX28DRAFT_2794 at 97.690 kb on - strand at 97.953 kb on + strand, within EX28DRAFT_2795 at 98.025 kb on + strand, within EX28DRAFT_2795 at 98.026 kb on - strand, within EX28DRAFT_2795 at 98.087 kb on + strand, within EX28DRAFT_2795 at 98.214 kb on - strand at 98.311 kb on + strand, within EX28DRAFT_2796 at 98.337 kb on - strand, within EX28DRAFT_2796 at 98.352 kb on - strand, within EX28DRAFT_2796 at 98.387 kb on - strand, within EX28DRAFT_2796 at 98.907 kb on + strand, within EX28DRAFT_2796 at 99.280 kb on + strand, within EX28DRAFT_2797 at 99.280 kb on + strand, within EX28DRAFT_2797 at 99.280 kb on + strand, within EX28DRAFT_2797 at 99.412 kb on + strand, within EX28DRAFT_2797 at 99.955 kb on + strand at 99.960 kb on - strand at 99.960 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 97,409 + EX28DRAFT_2794 0.58 +0.4 97,409 + EX28DRAFT_2794 0.58 -0.7 97,409 + EX28DRAFT_2794 0.58 +0.4 97,410 - EX28DRAFT_2794 0.58 -0.0 97,558 - EX28DRAFT_2794 0.77 +0.1 97,602 + EX28DRAFT_2794 0.82 +0.1 97,602 + EX28DRAFT_2794 0.82 -0.6 97,603 - EX28DRAFT_2794 0.82 -0.3 97,603 - EX28DRAFT_2794 0.82 +0.3 97,603 - EX28DRAFT_2794 0.82 +0.5 97,603 - EX28DRAFT_2794 0.82 -0.0 97,638 + EX28DRAFT_2794 0.87 +0.5 97,639 - EX28DRAFT_2794 0.87 +0.3 97,690 - -0.9 97,953 + EX28DRAFT_2795 0.41 +0.2 98,025 + EX28DRAFT_2795 0.61 -0.3 98,026 - EX28DRAFT_2795 0.61 -0.3 98,087 + EX28DRAFT_2795 0.78 +0.3 98,214 - -0.5 98,311 + EX28DRAFT_2796 0.10 -0.5 98,337 - EX28DRAFT_2796 0.14 -0.2 98,352 - EX28DRAFT_2796 0.16 -0.8 98,387 - EX28DRAFT_2796 0.20 -0.7 98,907 + EX28DRAFT_2796 0.87 +0.4 99,280 + EX28DRAFT_2797 0.29 -0.7 99,280 + EX28DRAFT_2797 0.29 -0.4 99,280 + EX28DRAFT_2797 0.29 -0.6 99,412 + EX28DRAFT_2797 0.43 +0.0 99,955 + +0.4 99,960 - +0.4 99,960 - -0.5
Or see this region's nucleotide sequence