Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2713 and EX28DRAFT_2714 are separated by 91 nucleotides EX28DRAFT_2714 and EX28DRAFT_2715 are separated by 64 nucleotides
EX28DRAFT_2713: EX28DRAFT_2713 - signal recognition particle subunit FFH/SRP54 (srp54), at 18,002 to 19,363
_2713
EX28DRAFT_2714: EX28DRAFT_2714 - ABC-type uncharacterized transport system, permease component, at 19,455 to 20,321
_2714
EX28DRAFT_2715: EX28DRAFT_2715 - Putative Mg2+ and Co2+ transporter CorB, at 20,386 to 21,627
_2715
Position (kb) 19
20
21 Strain fitness (log2 ratio) -1
0
1
2 at 19.430 kb on - strand at 19.489 kb on + strand at 19.490 kb on - strand at 19.505 kb on + strand at 19.506 kb on - strand at 19.527 kb on + strand at 19.527 kb on + strand at 19.527 kb on + strand at 19.527 kb on + strand at 19.527 kb on + strand at 19.527 kb on + strand at 19.527 kb on + strand at 19.527 kb on + strand at 19.527 kb on + strand at 19.528 kb on - strand at 19.528 kb on - strand at 19.529 kb on + strand at 19.529 kb on + strand at 19.530 kb on - strand at 19.820 kb on + strand, within EX28DRAFT_2714 at 19.820 kb on + strand, within EX28DRAFT_2714 at 19.986 kb on + strand, within EX28DRAFT_2714 at 20.119 kb on - strand, within EX28DRAFT_2714 at 20.187 kb on + strand, within EX28DRAFT_2714 at 20.188 kb on - strand, within EX28DRAFT_2714 at 20.188 kb on - strand, within EX28DRAFT_2714 at 20.189 kb on + strand, within EX28DRAFT_2714 at 20.189 kb on + strand, within EX28DRAFT_2714 at 20.189 kb on + strand, within EX28DRAFT_2714 at 20.189 kb on + strand, within EX28DRAFT_2714 at 20.190 kb on - strand, within EX28DRAFT_2714 at 20.190 kb on - strand, within EX28DRAFT_2714 at 20.190 kb on - strand, within EX28DRAFT_2714 at 20.283 kb on + strand at 20.284 kb on - strand at 20.302 kb on + strand at 20.303 kb on - strand at 20.320 kb on - strand at 20.355 kb on + strand at 20.454 kb on - strand at 20.466 kb on + strand at 20.467 kb on - strand at 20.467 kb on - strand at 20.529 kb on - strand, within EX28DRAFT_2715 at 21.178 kb on + strand, within EX28DRAFT_2715 at 21.182 kb on - strand, within EX28DRAFT_2715 at 21.265 kb on + strand, within EX28DRAFT_2715 at 21.300 kb on + strand, within EX28DRAFT_2715 at 21.301 kb on - strand, within EX28DRAFT_2715
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 19,430 - +0.3 19,489 + -0.1 19,490 - -1.4 19,505 + -0.5 19,506 - -0.3 19,527 + -0.3 19,527 + +0.2 19,527 + +0.1 19,527 + +0.3 19,527 + +0.1 19,527 + +0.3 19,527 + -0.1 19,527 + -0.1 19,527 + +0.2 19,528 - -0.4 19,528 - +0.0 19,529 + -0.3 19,529 + +0.6 19,530 - -0.4 19,820 + EX28DRAFT_2714 0.42 +0.4 19,820 + EX28DRAFT_2714 0.42 -0.7 19,986 + EX28DRAFT_2714 0.61 +2.1 20,119 - EX28DRAFT_2714 0.77 -0.5 20,187 + EX28DRAFT_2714 0.84 +0.5 20,188 - EX28DRAFT_2714 0.85 -0.9 20,188 - EX28DRAFT_2714 0.85 -0.0 20,189 + EX28DRAFT_2714 0.85 +1.1 20,189 + EX28DRAFT_2714 0.85 +0.2 20,189 + EX28DRAFT_2714 0.85 +0.9 20,189 + EX28DRAFT_2714 0.85 +0.1 20,190 - EX28DRAFT_2714 0.85 +0.2 20,190 - EX28DRAFT_2714 0.85 +0.3 20,190 - EX28DRAFT_2714 0.85 -0.1 20,283 + -0.0 20,284 - -0.2 20,302 + +0.2 20,303 - -0.2 20,320 - +0.2 20,355 + +0.4 20,454 - +1.5 20,466 + +0.2 20,467 - -0.7 20,467 - +0.5 20,529 - EX28DRAFT_2715 0.12 -0.2 21,178 + EX28DRAFT_2715 0.64 -0.7 21,182 - EX28DRAFT_2715 0.64 -0.4 21,265 + EX28DRAFT_2715 0.71 -0.2 21,300 + EX28DRAFT_2715 0.74 -0.1 21,301 - EX28DRAFT_2715 0.74 +0.4
Or see this region's nucleotide sequence