Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2359 and EX28DRAFT_2360 are separated by 62 nucleotides EX28DRAFT_2360 and EX28DRAFT_2361 are separated by 89 nucleotides
EX28DRAFT_2359: EX28DRAFT_2359 - 5'-methylthioribose kinase (EC 2.7.1.100), at 2,378,900 to 2,380,099
_2359
EX28DRAFT_2360: EX28DRAFT_2360 - Uncharacterized conserved protein, at 2,380,162 to 2,381,403
_2360
EX28DRAFT_2361: EX28DRAFT_2361 - ABC-type sugar transport system, periplasmic component, at 2,381,493 to 2,382,557
_2361
Position (kb)
2380
2381
2382 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2379.282 kb on - strand, within EX28DRAFT_2359 at 2379.282 kb on - strand, within EX28DRAFT_2359 at 2379.314 kb on + strand, within EX28DRAFT_2359 at 2379.315 kb on - strand, within EX28DRAFT_2359 at 2380.014 kb on + strand at 2380.025 kb on - strand at 2380.101 kb on + strand at 2380.101 kb on + strand at 2380.151 kb on + strand at 2380.197 kb on + strand at 2380.200 kb on - strand at 2380.215 kb on + strand at 2380.352 kb on + strand, within EX28DRAFT_2360 at 2380.352 kb on + strand, within EX28DRAFT_2360 at 2380.466 kb on + strand, within EX28DRAFT_2360 at 2380.467 kb on - strand, within EX28DRAFT_2360 at 2380.895 kb on + strand, within EX28DRAFT_2360 at 2380.896 kb on - strand, within EX28DRAFT_2360 at 2380.929 kb on - strand, within EX28DRAFT_2360 at 2381.023 kb on - strand, within EX28DRAFT_2360 at 2381.096 kb on + strand, within EX28DRAFT_2360 at 2381.096 kb on + strand, within EX28DRAFT_2360 at 2381.097 kb on - strand, within EX28DRAFT_2360 at 2381.292 kb on - strand at 2381.408 kb on - strand at 2381.495 kb on - strand at 2381.495 kb on - strand at 2381.495 kb on - strand at 2382.017 kb on - strand, within EX28DRAFT_2361 at 2382.266 kb on + strand, within EX28DRAFT_2361 at 2382.277 kb on + strand, within EX28DRAFT_2361 at 2382.277 kb on + strand, within EX28DRAFT_2361 at 2382.393 kb on - strand, within EX28DRAFT_2361
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,379,282 - EX28DRAFT_2359 0.32 -0.1 2,379,282 - EX28DRAFT_2359 0.32 -0.8 2,379,314 + EX28DRAFT_2359 0.34 -0.4 2,379,315 - EX28DRAFT_2359 0.35 -0.4 2,380,014 + +0.7 2,380,025 - +0.3 2,380,101 + -0.3 2,380,101 + +0.3 2,380,151 + -0.5 2,380,197 + +0.3 2,380,200 - +0.3 2,380,215 + +0.4 2,380,352 + EX28DRAFT_2360 0.15 -0.1 2,380,352 + EX28DRAFT_2360 0.15 -0.2 2,380,466 + EX28DRAFT_2360 0.24 -2.4 2,380,467 - EX28DRAFT_2360 0.25 -0.2 2,380,895 + EX28DRAFT_2360 0.59 -0.1 2,380,896 - EX28DRAFT_2360 0.59 -0.1 2,380,929 - EX28DRAFT_2360 0.62 +3.0 2,381,023 - EX28DRAFT_2360 0.69 -0.6 2,381,096 + EX28DRAFT_2360 0.75 -0.8 2,381,096 + EX28DRAFT_2360 0.75 -0.4 2,381,097 - EX28DRAFT_2360 0.75 -1.0 2,381,292 - +0.1 2,381,408 - +0.1 2,381,495 - +0.1 2,381,495 - -0.8 2,381,495 - +2.5 2,382,017 - EX28DRAFT_2361 0.49 -0.3 2,382,266 + EX28DRAFT_2361 0.73 +1.6 2,382,277 + EX28DRAFT_2361 0.74 -0.1 2,382,277 + EX28DRAFT_2361 0.74 -0.5 2,382,393 - EX28DRAFT_2361 0.85 -0.3
Or see this region's nucleotide sequence